Select Publications

Preprints

Rana P; Sowmya A; Meijering E; Song Y, 2022, Imbalanced classification for protein subcellular localisation with multilabel oversampling, http://dx.doi.org/10.1101/2022.09.12.507675

Rana P; Sowmya A; Meijering E; Song Y, 2022, Data augmentation for imbalanced blood cell image classification, http://dx.doi.org/10.1101/2022.08.30.505762

Xue T; Zhang F; Zhang C; Chen Y; Song Y; Golby AJ; Makris N; Rathi Y; Cai W; O'Donnell LJ, 2022, Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learning for Consistent Tractography Parcellation across Populations and dMRI Acquisitions, http://dx.doi.org/10.48550/arxiv.2207.08975

Chen Y; Zhang F; Zhang C; Xue T; Zekelman LR; He J; Song Y; Makris N; Rathi Y; Golby AJ; Cai W; O'Donnell LJ, 2022, White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning, http://dx.doi.org/10.48550/arxiv.2207.02402

Rana P; Sowmya A; Meijering E; Song Y, 2022, Data augmentation for imbalanced blood cell image classification, http://dx.doi.org/10.21203/rs.3.rs-1645828/v1

Chen Y; Zhang C; Xue T; Song Y; Makris N; Rathi Y; Cai W; Zhang F; O'Donnell LJ, 2022, DFC: Anatomically Informed Fiber Clustering with Self-supervised Deep Learning for Fast and Effective Tractography Parcellation, http://dx.doi.org/10.48550/arxiv.2205.00627

Xue T; Zhang F; Zhang C; Chen Y; Song Y; Makris N; Rathi Y; Cai W; O'Donnell LJ, 2022, SupWMA: Consistent and Efficient Tractography Parcellation of Superficial White Matter with Deep Learning, http://dx.doi.org/10.48550/arxiv.2201.12528

Mandal A; Priyam S; Chan HH; Gouveia BM; Guitera P; Song Y; Baker MAB; Vafaee F, 2022, Computer-aided diagnosis of reflectance confocal images to differentiate between lentigo maligna (LM) and atypical intraepidermal melanocytic proliferation (AIMP), http://dx.doi.org/10.1101/2022.05.10.491423

Chen Y; Zhang C; Song Y; Makris N; Rathi Y; Cai W; Zhang F; O'Donnell LJ, 2021, Deep Fiber Clustering: Anatomically Informed Unsupervised Deep Learning for Fast and Effective White Matter Parcellation, http://dx.doi.org/10.48550/arxiv.2107.04938

Wang X; Xiang T; Zhang C; Song Y; Liu D; Huang H; Cai W, 2021, BiX-NAS: Searching Efficient Bi-directional Architecture for Medical Image Segmentation, http://dx.doi.org/10.48550/arxiv.2106.14033

Xiang T; Zhang C; Liu D; Song Y; Huang H; Cai W, 2020, BiO-Net: Learning Recurrent Bi-directional Connections for Encoder-Decoder Architecture, http://dx.doi.org/10.48550/arxiv.2007.00243

Liu D; Zhang D; Song Y; Zhang F; O'Donnell L; Huang H; Chen M; Cai W, 2020, Unsupervised Instance Segmentation in Microscopy Images via Panoptic Domain Adaptation and Task Re-weighting, http://dx.doi.org/10.48550/arxiv.2005.02066

Jia H; Song Y; Zhang D; Huang H; Feng D; Fulham M; Xia Y; Cai W, 2018, 3D Global Convolutional Adversarial Network\\ for Prostate MR Volume Segmentation, http://dx.doi.org/10.48550/arxiv.1807.06742

Liu S; Zhang D; Song Y; Peng H; Cai W, 2017, Automated 3D Neuron Tracing with Precise Branch Erasing and Confidence Controlled Back-Tracking, http://dx.doi.org/10.1101/109892


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