Select Publications
Journal articles
2013, 'Density-dependent blood stage Plasmodium falciparum suppresses malaria super-infection in a malaria holoendemic population', American Journal of Tropical Medicine and Hygiene, 89, pp. 850 - 856, http://dx.doi.org/10.4269/ajtmh.13-0049
,2013, 'Effect of mature, blood-stage Plasmodium parasite sequestration on pathogen biomass in mathematical and in vivo models of malaria.', Infection and Immunity, http://dx.doi.org/10.1128/IAI.00705-13
,2013, 'Estimating the contribution of the gut to plasma viral load in early SIV infection', Retrovirology, 10, http://dx.doi.org/10.1186/1742-4690-10-105
,2013, 'Clinical Assessment of Anti-Viral CD8+ T Cell Immune Monitoring Using QuantiFERON-CMV® Assay to Identify High Risk Allogeneic Hematopoietic Stem Cell Transplant Patients with CMV Infection Complications', PLoS ONE, 8, http://dx.doi.org/10.1371/journal.pone.0074744
,2013, 'Immunogenetics and transplantation', Current Opinion in Immunology, 25, pp. 606 - 607, http://dx.doi.org/10.1016/j.coi.2013.09.001
,2013, 'Specificity, promiscuity, and precursor frequency in immunoreceptors', Current Opinion in Immunology, 25, pp. 639 - 645, http://dx.doi.org/10.1016/j.coi.2013.07.001
,2013, 'Immunogenetics and transplantation', Current Opinion in Immunology, http://dx.doi.org/10.1016/j.coi.2013.09.001
,2013, 'Correction: An “Escape Clock” for Estimating the Turnover of SIV DNA in Resting CD4+ T Cells', PLoS Pathogens, 9, http://dx.doi.org/10.1371/annotation/7556ed6f-2d66-48a9-be38-4aefe4400393
,2013, 'Acute Neonatal Infections 'Lock-In' a Suboptimal CD8+ T Cell Repertoire with Impaired Recall Responses', PLoS Pathogens, 9, http://dx.doi.org/10.1371/journal.ppat.1003572
,2013, 'Specificity, promiscuity, and precursor frequency in immunoreceptors', Current Opinion in Immunology, http://dx.doi.org/10.1016/j.coi.2013.07.001
,2013, 'The search for an HIV cure: Tackling latent infection', The Lancet Infectious Diseases, 13, pp. 614 - 621, http://dx.doi.org/10.1016/S1473-3099(13)70043-4
,2013, 'Trivalent live attenuated influenza-simian immunodeficiency virus vaccines: Efficacy and evolution of cytotoxic T lymphocyte escape in macaques', Journal of Virology, 87, pp. 4146 - 4160, http://dx.doi.org/10.1128/JVI.02645-12
,2013, 'Footprint of APOBEC3 on the genome of human retroelements', Journal of Virology, 87, pp. 8195 - 8204
,2013, 'NKT and MAIT invariant TCRalpha sequences can be produced efficiently by VJ gene recombination', Immunobiology, 218, pp. 213 - 224, http://dx.doi.org/10.1016/j.imbio.2012.04.003
,2012, 'Mining the mechanisms of an HIV vaccine.', Nature medicine, 18, pp. 1020 - 1021
,2012, 'Correction: Early Priming Minimizes the Age-Related Immune Compromise of CD8+T Cell Diversity and Function', PLoS Pathogens, 8, http://dx.doi.org/10.1371/annotation/e142f9de-7f30-4759-bda1-a651e86d5ba6
,2012, 'An “Escape clock” for estimating the turnover of SIV DNA in resting CD4+ T cells', PLoS Pathogens, 8, pp. e1002615, http://www.plospathogens.org/article/info%3Adoi/10.1371/journal.ppat.1002615
,2012, 'APOBEC3G and APOBEC3F rarely co-mutate the same HIV genome', Retrovirology, 9, pp. 113, http://www.retrovirology.com/content/9/1/113
,2012, 'Consequences of suboptimal priming are apparent for low-avidity T-cell responses', Immunology and Cell Biology, 90, pp. 216 - 223, http://dx.doi.org/10.1038/icb.2011.36
,2012, 'Early priming minimizes the age-related immune compromise of CD8 + T cell diversity and function', PLoS Pathogens, 8, pp. Article number e1002544, http://dx.doi.org/10.1371/journal.ppat.1002544
,2012, 'Lifelong persistent viral infection alters the naive T cell pool, impairing CD8 T cell immunity in late life', Journal of Immunology, 189, pp. 5356 - 5366, http://dx.doi.org/10.4049/jimmunol.1201867
,2012, 'Mining the mechanisms of an HIV vaccine', Nature Medicine, 18, pp. 1020 - 1021, http://dx.doi.org/10.1038/nm.2858
,2012, 'The Dynamics of Naturally Acquired Immunity to Plasmodium falciparum Infection', PLoS Computational Biology, 8, pp. Article number e1002729, http://dx.doi.org/10.1371/journal.pcbi.1002729
,2012, 'The origins of genetic diversity in HIV-1', Virus Research, 169, pp. 415 - 429, http://dx.doi.org/10.1016/j.virusres.2012.06.015
,2012, 'Use it or lose it: establishment and persistence of T cell memory', Frontiers in Immunology, 3, pp. 1 - 11, http://dx.doi.org/10.3389/fimmu.2012.00357
,2011, 'Comparing the kinetics of NK cells, CD4, and CD8 T cells in murine cytomegalovirus infection', Journal of Immunology, 187, pp. 1385 - 1392, http://dx.doi.org/10.4049/jimmunol.1100416
,2011, 'APOBEC3 Has Not Left an Evolutionary Footprint on the HIV-1 Genome', Journal of Virology, 85, pp. 9139 - 9146, http://jvi.asm.org/content/85/17/9139.full?sid=ca96d928-5132-4714-b693-bde43f5124ed
,2011, 'Comparing the Kinetics of NK Cells, CD4, and CD8 T Cells in Murine Cytomegalovirus Infection', Journal of Immunology, 187, pp. 1385 - 1392, http://dx.doi.org/10.4049/jimmunol.1190037
,2011, 'Low levels of SIV infection in sooty mangabey central memory CD4 + T cells are associated with limited CCR5 expression', Nature Medicine, 17, pp. 830 - 836, http://dx.doi.org/10.1038/nm.2395
,2011, 'Nonrandom attrition of the naive CD8+ T-cell pool with aging governed by T-cell receptor: pMHC interactions', Proceedings of the National Academy of Sciences of the United States of America, 108, pp. 13694 - 13699, http://dx.doi.org/10.1073/pnas.1107594108
,2011, 'Simian-human immunodeficiency infection - is the course set in the acute phase?', PLoS One, 6, pp. e17180 - e17189, http://dx.doi.org/10.1371/journal.pone.0017180
,2010, 'A novel fluorescent-based assay reveals that thrombopoietin signaling and Bcl-X(L) influence, respectively, platelet and erythrocyte lifespans', Experimental Hematology, 38, pp. 453 - 461
,2010, 'Accurately measuring recombination between closely related HIV-1 genomes', PLoS Computational Biology, 6, pp. e1000766
,2010, 'Biological determinants of immune reconstitution in HIV-infected patients receiving antiretroviral therapy: the role of IL 7/IL-7Ra and microbial translocation', Journal of Infectious Diseases, 202, pp. 1254 - 1264
,2010, 'CD8+ T cell control of HIV-- a known unknown', PLoS Pathogens, 6, pp. e1000728
,2010, 'Cell-autonomous and environmental contributions to the interstitial migration of T cells', Seminars In Immunopathology, 32, pp. 257 - 274
,2010, 'Convergent recombination shapes the clonotypic landscape of the naïve T-cell repertoire', Proceedings of the National Academy of Sciences of the United States of America, 107, pp. 19414 - 19419, http://dx.doi.org/10.1073/pnas.1010586107
,2010, 'Diversity of the CD8+ T Cell repertoire elicited against an immunodominant epitope does not depend on the context of infection', Journal of Immunology, 184, pp. 2958 - 2965
,2010, 'Drug-induced thrombocytopenia (DITP): development of a novel NOD/SCID mouse model to evaluate clearance of circulating platelets by drug-dependent antibodies and the efficacy of IVIG', Blood, 116, pp. 1958 - 1960
,2010, 'Genetic and structural basis for selection of a ubiquitous T cell receptor deployed in Epstein-Barr virus infection', PLoS Pathogens, 6, pp. e1001198
,2010, 'Predicting CD62L expression during the CD8+ T-cell response in vivo', Immunology and Cell Biology, 88, pp. 157 - 164
,2010, 'Reducing chimera formation during PCR amplification to ensure accurate genotyping', Gene, 469, pp. 45 - 51
,2010, 'Timing of immune escape linked to success or failure of vaccination', PLoS One, 5
,2009, 'TCR β-chain sharing in human CD8+ T cell responses to cytomegalovirus and EBV', Journal of Immunology, 181, pp. 7853 - 7862, http://dx.doi.org/10.4049/jimmunol.181.11.7853
,2009, 'P09-08. The complexity of the infecting inoculum determines the outcome of infection', Retrovirology, 6, http://dx.doi.org/10.1186/1742-4690-6-S3-P121
,2009, 'Cell division predicts CD62L expression in vivo (83.6)', The Journal of Immunology, 182, pp. 83.6 - 83.6, http://dx.doi.org/10.4049/jimmunol.182.supp.83.6
,2009, 'Characterization of the diversity of the CD8+ T cell repertoire against the same epitope induced by bacterial or viral immunization (132.9)', The Journal of Immunology, 182, pp. 132.9 - 132.9, http://dx.doi.org/10.4049/jimmunol.182.supp.132.9
,2009, 'Complexity of the inoculum determines the rate of reversion of SIV Gag CD8 T cell mutant virus and outcome of infection', PLoS Pathogens, 5, pp. e1000378
,2009, 'Diversity and clonotypic composition of influenza-specific CD8+ TCR repertoires remain unaltered in the absence of Aire', European Journal of Immunology, 40, pp. 849 - 858
,2009, 'Division-linked differentiation can account for CD8+ T-cell phenotype in vivo', European Journal of Immunology, 39, pp. 67 - 77
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