Researcher

Professor Susan Ramus

Keywords

Fields of Research (FoR)

Obstetrics and Gynaecology, Cancer Genetics, Genomics

SEO tags

Biography

Professor Susan Ramus is an ovarian cancer researcher within the School of Women's and Children's Health, and a member of the Adult Cancer Program in the Lowy Cancer Research Centre. She leads the Molecular Oncology Group.

She was awarded a PhD from the University of Melbourne, Australia, developing methods of mutation detection. During a post-doctoral position at the University of Cambridge, UK, she studied the genetics of inherited ovarian...view more

Professor Susan Ramus is an ovarian cancer researcher within the School of Women's and Children's Health, and a member of the Adult Cancer Program in the Lowy Cancer Research Centre. She leads the Molecular Oncology Group.

She was awarded a PhD from the University of Melbourne, Australia, developing methods of mutation detection. During a post-doctoral position at the University of Cambridge, UK, she studied the genetics of inherited ovarian cancer and established projects on molecular pathology. On returning to the University of Melbourne, Australia, she performed somatic profiling of tumours from early onset breast cancers. She then moved to University College London, UK, to lead large-scale ovarian cancer genetic susceptibility studies. At the University of Southern California, USA, she led large consortium projects on both ovarian cancer genetic susceptibility and tumour profiling. She established and co-leads the Ovarian Tumour Tissue Analysis (OTTA) consortium and is on the steering committee of the Ovarian Cancer Association Consortium (OCAC). She now at the University of New South Wales as Professor of Molecular Oncology in the School of Women’s and Children’s Health.

Society Membership:

American Association for Cancer Research (AACR)

American Society of Human Genetics (ASHG)

Ovarian Tumor Tissue Analysis (OTTA) Consortium

Ovarian Cancer Association Consortium (OCAC)

Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA)

Professional Activities:

Joint lead of steering committee OTTA

Member of steering committee OCAC

Member of genotyping committee OCAC

Member of data access committee OCAC

Member of data access committee OTTA

Member of pathology working group CIMBA

Selected publications

Key publications from the last 10 years.

1) Millstein J, et al. …Ramus SJ. Prognostic gene expression signature for high-grade serous ovarian cancer. Ann Oncol. 2020

2) Talhouk A, et al. …Ramus SJ*, Doherty JA*, Bowtell DD*, Anglesio MS*. Development and Validation of the Gene Expression Predictor of High-grade Serous Ovarian Carcinoma Molecular SubTYPE (PrOTYPE). Clin Cancer Res. 2020

3) Martins FC, et al. Clinical and pathological associations of PTEN expression in ovarian cancer: a multicentre study from the Ovarian Tumour Tissue Analysis Consortium. Br J Cancer. 2020

4) Yang X, et al. Ovarian and Breast Cancer Risks Associated With Pathogenic Variants in RAD51C and RAD51D. J Natl Cancer Inst. 2020

5) Pavanello M, et al. …Ramus SJ. Rare Germline Genetic Variants and the Risks of Epithelial Ovarian Cancer. Cancers. 2020

6) Yang X, et al. Cancer risks associated with germline PALB2 pathogenic variants - an international study of 524 families. JCO. 2019

7) Meagher NS, et al. A combination of the immunohistochemical markers CK7 and SATB2 is highly sensitive and specific for distinguishing primary ovarian mucinous tumors from colorectal and appendiceal metastases. Mod Pathol. 2019

8) Saner FAM, et al. Going to extremes: determinants of extraordinary response and survival in patients with cancer. Nat Rev Cancer. 2019

9) Bodelon C, et al. Molecular Classification of Epithelial Ovarian Cancer Based on Methylation Profiling: Evidence for Survival Heterogeneity. Clin Cancer Res. 2019

10) Meagher NS, et al. Does the primary site really matter? Profiling mucinous ovarian cancers of uncertain primary origin (MO-CUP) to personalise treatment and inform the design of clinical trials. Gynecol Oncol. 2018

11) Rambau PF, et al. Association of p16 expression with prognosis varies across ovarian carcinoma histotypes: an Ovarian Tumor Tissue Analysis consortium study. J Pathol Clin Res. 2018

12) Yang X, et al. Evaluation of polygenic risk scores for ovarian cancer risk prediction in a prospective cohort study. J Med Genet. 2018

13) Phelan CM, et al. Identification of 12 new susceptibility loci for different histotypes of epithelial ovarian cancer. Nature Genetics. 2017

14) Goode EL, et al. … Ramus SJ. Dose-Response Association of CD8+ Tumor-Infiltrating Lymphocytes and Survival Time in High-Grade Serous Ovarian Cancer. JAMA Oncology. 2017

15) Dicks E*, Song H*, Ramus SJ* et al. Germline whole exome sequencing and large-scale replication identifies FANCM as a likely high grade serous ovarian cancer susceptibility gene. Oncotarget. 2017

16) Pharoah PDP, et al. …Ramus SJ. PPM1D Mosaic Truncating Variants in Ovarian Cancer Cases May Be Treatment-Related Somatic Mutations. JNCI. 2016

17) Lawrenson K, et al. Functional mechanisms underlying pleiotropic risk alleles at the 19p13.1 breast-ovarian cancer susceptibility locus. Nature Communications. 2016

18) Rebbeck T, et al. …Ramus SJ. Inheritance of deleterious mutations at both BRCA1 and BRCA2 in an international sample of 32,295 women. Breast Cancer Res. 2016

19) Kuchenbaecker KB, Ramus SJ* et al. Identification of six new susceptibility loci for invasive epithelial ovarian cancer. Nature Genetics. 2015

20) Leong HS, et al. Efficient molecular subtype classification of high-grade serous ovarian cancer. J Pathol. 2015

21) Ramus SJ* et al. Germline Mutations in the BRIP1, BARD1, PALB2, and NBN Genes in Women With Ovarian Cancer. JNCI. 2015

22) Song H*, Dicks E*, Ramus SJ* et al. Contribution of Germline Mutations in the RAD51B, RAD51C, and RAD51D Genes to Ovarian Cancer in the Population. JCO. 2015

23) Köbel M, et al. Evidence for a time-dependent association between FOLR1 expression and survival from ovarian carcinoma: implications for clinical testing. An Ovarian Tumour Tissue Analysis consortium study. Br J Cancer. 2014

24) Pharoah PD*, Tsai YY*, Ramus SJ* et al. GWAS meta-analysis and replication identifies three new susceptibility loci for ovarian cancer. Nature Genetics. 2013

25) Sieh W, et al. …Ramus SJ. Hormone-receptor expression and ovarian cancer survival: an Ovarian Tumor Tissue Analysis consortium study. Lancet Oncology. 2013

26) Köbel M, et al. Biomarker-based ovarian carcinoma typing: a histologic investigation in the ovarian tumor tissue analysis consortium. Cancer Epidemiol Biomarkers Prev. 2013

27) Ramus SJ et al. Ovarian cancer susceptibility alleles and risk of ovarian cancer in BRCA1 and BRCA2 mutation carriers. Hum Mut. 2012

28) Bolton K, et al. Association between BRCA1 and BRCA2 mutations and survival in women with invasive epithelial ovarian cancer. JAMA. 2012

29) Ramus SJ et al. Genetic variation at 9p22.2 and ovarian cancer risk for BRCA1 and BRCA2 mutation carriers. JNCI. 2011

30) Notaridou M, et al. Common alleles in candidate susceptibility genes associated with risk and development of epithelial ovarian cancer. Int J Cancer. 2011

31) Southey M, et al. Morphological predictors of BRCA1 germline mutations in young women with breast cancer. Br J Cancer. 2011


My Grants

Current

National Health and Medical Research Council 2021-2026
            Prospective Ovarian Cancer Cohort to Authenticate Stratification of Prognosis in Ovarian Tumours (POCCA-SPOT)

Cancer Australia 2018-2021
            The contribution of rare alleles to non high grade serous ovarian cancer.

Cancer Council NSW 2018-2021
             Moving towards personalised treatments for ovarian cancer.

Department of Defence 2016-2021
            Multidisciplinary Ovarian Cancer Outcomes Group (MOCOG).

Recently completed

National Institute of Health (NIH) USA 2014-2019
            Identifying prognostic markers and therapeutic targets for serous ovarian cancer.

National Institute of Health (NIH) 2014-2019
            The contribution of rare alleles to ovarian cancer in the population.

Rivkin Center for Ovarian Cancer Research. Pilot grant. 2018-2019
            Genetic susceptibility to non high grade serous ovarian cancer.

 


My Research Activities

The aim of my research program is to improve ovarian cancer risk prediction and prognosis, by using large international consortia that are adequately powered to have an impact for patients.

 

Improving risk prediction for ovarian cancer.

The aim is to identify women at increased risk of ovarian cancer before they develop the disease, by studying inherited changes in their DNA. We are identifying two types of changes.

1) Common variants

Finding large numbers of changes, each with a very small increased risk.

These changes are identified by performing Genome Wide Association Studies (GWAS) in large numbers of cases and controls from two international consortia. The Ovarian Cancer Association Consortium (OCAC) and Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA).

2) Rare variants

Finding changes that are rare in the population but have a moderate increased risk.

These changes are identified by performing whole exome sequencing (WES) and large-scale validation by targeted sequencing in large numbers of cases and controls. High grade serous ovarian cancer (HGSOC): We have screened 80 genes in up to 6,000 ovarian cancer cases and 6,000 unaffected controls. Non HGSOC: We have screened 32 genes in 2,000 ovarian cancer cases and 2,000 unaffected controls.

Improving prognosis for Ovarian Cancer

The aim is to identify markers that can group women with similar changes in their tumours and determine their prognosis. Being able to predict how well a woman may respond to current treatments may identify a group of women who need alternative treatments. These studies are performed through the Ovarian Tumour Tissue Analysis (OTTA) Consortium.

1) Validation of prognostic markers by immunohistochemistry (IHC)

Analysis of individual biomarkers using large scale centralised staining and scoring of tissue microarrays (TMA).

2) Identifying new prognostic markers for HGSOC

Large scale genomic analysis of formalin fixed paraffin embedded (FFPE) tumours using the latest technologies such as NanoString RNA expression, screening for somatic mutations using TamSeq and DNA copy number using shallow whole genome sequencing (sWGS).

 


My Research Supervision


Areas of supervision

Genetics and Genomics of Ovarian Cancer


Currently supervising

Two PhD students

Marina Pavenello “The contribution of rare alleles to non-high grade serous ovarian cancer”

Nicki Meagher “Unravelling mucinous tumours of the ovary and intestinal tract: diagnosis, classification and molecular profiling”

View less

Location

School of Women's and Children's Health
Adult Cancer Program
Level 2, Lowy Cancer Research Centre
Cnr High and Botany St, UNSW


Map reference (Google map)

Contact

(02) 9385 1720