Journal articles
Kelleher AD, 2014, 'Promoter targeted small RNAs: stabilising viral reservoirs', Microbiology Australia, 10, pp. 1071
Kelleher AD, 2014, 'Promoter targeted small RNAs: stabilising viral reservoirs', Microbiology Australia, 35, pp. 103 - 104, http://dx.doi.org/10.1071/ma14033
Murray JM; Zaunders JJ; Koelsch KK; Natarajan V; Badralmaa Y; McBride K; Carrera A; Cooper DA; Emery S; Kelleher AD, 2013, 'Short communication: HIV blips while on antiretroviral therapy can indicate consistently detectable viral levels due to assay underreporting', AIDS Research and Human Retroviruses, 29, pp. 1621 - 1625, http://dx.doi.org/10.1089/aid.2013.0132
Vaidya SA; Streeck H; Beckwith N; Ghebremichael M; Pereyra F; Kwon DS; Addo MM; Rychert J; Routy JP; Jessen H; Kelleher AD; Hecht F; Sekaly RP; Carrington M; Walker BD; Allen TM; Rosenberg ES; Altfeld M, 2013, 'Temporal effect of HLA-B*57 on viral control during primary HIV-1 infection', Retrovirology, 10, http://dx.doi.org/10.1186/1742-4690-10-139
Hsu DC; Kerr SJ; Iampornsin T; Pett SL; Avihingsanon A; Thongpaeng P; Zaunders JJ; Ubolyam S; Ananworanich J; Kelleher AD; Cooper DA, 2013, 'Restoration of CMV-Specific-CD4 T Cells with ART Occurs Early and Is Greater in Those with More Advanced Immunodeficiency', Plos One, 8, http://dx.doi.org/10.1371/journal.pone.0077479
Phetsouphanh C; Xu Y; Amin J; Seddiki N; Procopio F; Sekaly RP; Zaunders JJ; Kelleher AD, 2013, 'Characterization of Transcription Factor Phenotypes within Antigen-Specific CD4+ T Cells Using Qualitative Multiplex Single-Cell RT-PCR', Plos One, 8, http://dx.doi.org/10.1371/journal.pone.0074946
McBride K; Xu Y; Bailey M; Seddiki N; Suzuki K; Murray JM; Gao Y; Yan C; Cooper DA; Kelleher AD; Koelsch KK; Zaunders J, 2013, 'The Majority of HIV Type 1 DNA in Circulating CD4+ T Lymphocytes Is Present in Non-Gut-Homing Resting Memory CD4+ T Cells', AIDS RESEARCH AND HUMAN RETROVIRUSES, 29, pp. 1330 - 1339, http://dx.doi.org/10.1089/aid.2012.0351
Kent SJ; Reece JC; Petravic J; Martyushev A; Kramski M; De Rose R; Cooper DA; Kelleher AD; Emery S; Cameron PU; Lewin SR; Davenport MP, 2013, 'The search for an HIV cure: Tackling latent infection', Lancet Infectious Diseases, 13, pp. 614 - 621, http://dx.doi.org/10.1016/S1473-3099(13)70043-4
French MA; Center RJ; Wilson KM; Fleyfel I; Fernandez S; Schorcht A; Stratov I; Kramski M; Kent SJ; Kelleher AD, 2013, 'Isotype-switched immunoglobulin G antibodies to HIV Gag proteins may provide alternative or additional immune responses to 'protective' human leukocyte antigen-B alleles in HIV controllers', AIDS, 27, pp. 519 - 528, http://dx.doi.org/10.1097/QAD.0b013e32835cb720
Suzuki K; Hattori S; Marks K; Ahlenstiel C; Maeda Y; Ishida T; Millington M; Boyd M; Symonds G; Cooper DA; Okada S; Kelleher AD, 2013, 'Promoter Targeting shRNA Suppresses HIV-1 Infection In vivo Through Transcriptional Gene Silencing', Molecular Therapy Nucleic Acids, 2, pp. e137, http://dx.doi.org/10.1038/mtna.2013.64
Tu E; Swenson LC; Land S; Pett S; Emery S; Marks K; Kelleher AD; Kaye S; Kaiser R; Schuelter E; Harrigan R, 2013, 'Results of external quality assessment for proviral DNA testing of HIV tropism in the Maraviroc switch collaborative study', Journal of Clinical Microbiology, 51, pp. 2063 - 2071, http://dx.doi.org/10.1128/JCM.00510-13
Mee Ling Munier C; Kelleher AD; Kent SJ; De Rose R, 2013, 'The role of T cell immunity in HIV-1 infection', Current Opinion in Virology, 3, pp. 438 - 446, http://dx.doi.org/10.1016/j.coviro.2013.05.009
Gilmore JB; Kelleher AD; Cooper DA; Murray JM, 2013, 'Explaining the determinants of first phase HIV decay dynamics through the effects of stage-dependent drug action', PLoS Computational Biology, 9, pp. e1002971 (11pp), http://dx.doi.org/10.1371/journal.pcbi.1002971
Swaminathan S; Murray DD; Kelleher AD, 2013, 'Mirnas and HIV: Unforeseen Determinants Of Host-Pathogen Interaction', Immunological Reviews, 254, pp. 265 - 280, http://dx.doi.org/10.1111/imr.12077Document
Porter K; Ewings FM; Ramjee G; Cooper DA; Fisher M; Schechter MT; Tambussi G; Kinloch-De Loes S; Miro J; Kelleher AD; Mcclure MO; Gabriel M; Phillips R; Weber J; Babiker AG, 2013, 'Short-course antiretroviral therapy in primary HIV infection', New England Journal of Medicine, 368, pp. 207 - 217, http://dx.doi.org/10.1056/NEJMoa1110039
Xu Y; Weatherall CJ; Bailey MR; Alcantara S; De Rose R; Estaquier J; Wilson KM; Suzuki K; Corbeil J; Cooper DA; Kent SJ; Kelleher AD; Zaunders J, 2013, 'Simian immunodeficiency virus infects follicular helper CD4 T cells in lymphoid tissues during pathogenic infection of pigtail macaques', Journal of Virology, 87, pp. 3760 - 3773, http://dx.doi.org/10.1128/JVI.02497-12
Seddiki N; Phetsouphanh C; Swaminathan S; Xu Y; Rao S; Li J; Sutcliffe E; Denyer G; Finlayson R; Gelgor L; Cooper DA; Zaunders J; Kelleher AD, 2013, 'The microRNA-9/B-lymphocyte-induced maturation protein-1/IL-2 axis is differentially regulated in progressive HIV infection', European Journal of Immunology, 43, pp. 510 - 520, http://dx.doi.org/10.1002/eji.201242695
Sargeant D; Deverasetty S; Luo Y; Villahoz‐Baleta A; Zobrist S; Rathnayake V; Russo J; Muesing M; Schiller M; Andrabi R; Kumar R; Bala M; Nair A; Biswas A; Wig N; Kumar P; Luthra K; Gonzalez N; McKee K; Yuste E; Mascola JR; Alcamí J; Vojnov L; Martins M; Bean A; de Santana MV; Sacha J; Wilson N; Bonaldo M; Galler R; Stevenson M; Watkins D; Aziz M; Mata M; Mahmood F; Durkin H; Liu C; Greenblatt R; Nowicki M; Golub E; Anastos K; French A; Baum L; Wacleche VS; Chomont N; Gosselin A; Monteiro P; Goupil M; Kared H; Tremblay C; Bernard N; Boulassel M; Routy J; Ancuta P; Jadlowsky J; Baiduc C; Richardson M; Bennett A; Jakobsen B; Riley JL; Vingert B; Benati D; Lambotte O; de Truchis P; Slama L; Jeannin P; Perez‐Patrigeon S; Boufassa F; Kwok WW; Lemaître F; Delfraissy J; Thèze J; Chakrabarti LA; French M; Center R; Wilson K; Fleyfel I; Fernandez S; Kelleher A; An P; Goedert J; Donfield S; Buchbinder S; Kirk G; Detels R; Winkler C; Lajoie J; Juno J; Burgener A; Rahman S; Mogk K; Wachihi C; Mwanjewe J; 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Jessen H; Kelleher A; Markowitz M; Pereyra F; Trocha A; Walker BD; Iwamoto A; Tokunaga K; Miura T; Tyagi M; Bacchus C; Hocqueloux L; Avettand‐Fenoël V; Saez‐Cirion A; Mélard A; Descours B; Samri A; Blanc C; Autran B; Rouzioux C; groups VAAAS; Zink MC; Graham DR; Gama L; Queen SE; Meulendyke KA; Mankowski JL; Clements JE; Beima‐Sofie K; Bigham A; Lingappa JR; Wamalwa D; Mackelprang RD; Maleche‐Obimbo E; Richardson B; John‐Stewart G; Mackelprang R; Bigham A; Celum C; de Bruyn G; Beima K; John‐Stewart G; Ronald A; Mugo N; Rainer A; Buckingham K; Bamshad M; Mullins J; McElrath J; Lingappa J; Madlala P; Singh R; Werner L; Sibeko S; An P; Karim SSA; Winkler CA; Ndung'u T; Peterson T; Kimani J; Wachihi C; Bielawny T; Mendoza L; Thavaneswaran S; Narayansingh M; Kariri T; Liang B; Ngugi E; Plummer F; Luo M; Kajaste‐Rudnitski A; Marelli S; Poli G; Berkhout B; Das AT; Vicenzi E; De Pasquale M; Kourteva Y; Allos T; D'Aquila R; Blackinton J; Thompson M; Mukherjee N; Freel S; Tomaras G; Keene J; Roan N; 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Balamurugan A; Yang O; Zack J; Chang L; Alkhatib G; Huang L; Chen Y; Yeh Y; Dey A; Kassa A; Nandi A; Sarkar P; Sun Y; Hartog K; Labranche C; Montefiori D; Srivastava I; Carfi A; Barnett S; Gulzar N; Montero M; Klaric K; Lepik C; Donald J; Tsai S; Wu S; Wang S; Degrado W; Lu S; Scott JK; Luo M; Tang D; Capina R; Yuan X; Prego C; Pinto JC; Alonso M; Barry C; Pilon R; Daniuk C; Tuff J; Pillet S; La D; Bielawny T; Czarnecki C; Lacap P; Peters H; Wong G; Kimani M; Wachihi C; Kimani J; Ball T; Sandstrom P; Kobinger G; Plummer F; Vaccari M; Cameron M; Liyanage N; Pegu P; Gordon S; Doster M; Sekaly R; Franchini G; Thanh HTT; Van den Bergh R; Kestens L; Massinga‐Loembe M; Colebunders R; De Baetselier P; Raes G; Group TS; Santos‐Oliveira J; Giacoia‐Gripp C; Regis E; Alexandrino‐Oliveira P; Amato V; Lindoso JA; Goto H; Guerra J; Mattos M; Oliveira‐Neto M; Grinzstejn B; Morgado M; Da‐Cruz A; Tugizov S; Herrera R; Veluppillai P; Greenspan D; Palefsky J; Thaisri H; Moriuchi M; Tsuchiya N; Rojanawiwat A; Pathipvanich P; Sawanpanyalert P; Ariyoshi K; Moriuchi H; Fitzgerald W; Grivel J; Ngwende S; Mudenge B; Madzimure D; Mudenge G, 2012, 'Track A Basic Science', Journal of the International AIDS Society, 15, pp. 18438 - 18401, http://dx.doi.org/10.7448/ias.15.5.18438
Kikuchi T; Iwabu Y; Kawana-Tachikawa A; Koga M; Hosoya N; Nomura S; Brumme ZL; Jessen H; Kelleher A; Markowitz M; Pereyra F; Trocha A; Walker BD; Iwamoto A; Tokunaga K; Miura T, 2012, 'Anti-APOBEC3G activity of HIV-1 Vif protein from elite controllers is attenuated compared to those from untreated chronic progressors or those from individuals with acute infection', JOURNAL OF THE INTERNATIONAL AIDS SOCIETY, 15, pp. 19 - 19, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000310588200043&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
French M; Center R; Wilson K; Fleyfel I; Fernandez S; Kelleher A, 2012, 'Natural control of HIV infection is associated with an isotype switched IgG antibody response to HIV core antigens in patients with 'non-protective' HLA-B alleles', JOURNAL OF THE INTERNATIONAL AIDS SOCIETY, 15, pp. 5 - 6, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000310588200010&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
Kelleher AD; Cooper DA, 2012, 'Acute HIV infection', , pp. 77 - 88, http://dx.doi.org/10.1016/B978-1-4557-0695-2.00006-7
Jarrin I; Pantazis N; Gill MJ; Geskus R; Perez-Hoyos S; Meyer L; Prins M; Touloumi G; Johnson A; Hamouda O; de Olalla PG; Porter K; del Amo J; EuroCoord CCI, 2012, 'Uptake of Combination Antiretroviral Therapy and HIV Disease Progression According to Geographical Origin in Seroconverters in Europe, Canada, and Australia', Clinical Infectious Diseases, 54, pp. 111 - 118, http://dx.doi.org/10.1093/cid/cir814
Hsu DC; Zaunders J; Plit ML; Leeman C; Ip S; Iampornsin T; Pett SL; Bailey MR; Amin J; Ubolyam S; Avihingsanon A; Ananworanich J; Ruxrungtham K; Cooper DA; Kelleher AD, 2012, 'A novel assay detecting recall response to Mycobacterium tuberculosis: Comparison with existing assays', Tuberculosis, 92, pp. 321 - 327, http://dx.doi.org/10.1016/j.tube.2012.03.008
Lodi S; Meyer L; Kelleher AD; Rosinska M; Ghosn J; Sannes M; Porter K, 2012, 'Immunovirologic Control 24 Months After Interruption of Antiretroviral Therapy Initiated Close to HIV Seroconversion', Annals of Internal Medicine, 172, pp. 1252 - 1255, http://dx.doi.org/10.1001/archinternmed.2012.2719
Sasson SC; Zaunders J; Seddiki N; Mcbride K; Koelsch KK; Merlin KM; Smith DE; Cooper DA; Kelleher AD; Bailey MR, 2012, 'Progressive activation of CD127+132- recent thymic emigrants into terminally differentiated CD127-132+ T-cells in HIV-1 infection', PLoS One, 7, pp. e31148, http://dx.doi.org/10.1371/journal.pone.0031148
Kramski M; Schorcht A; Johnston APR; Lichtfuss G; Jegaskanda S; De rose R; Stratov I; Kelleher AD; French MA; Center RJ; Jaworowski A; Kent SJ, 2012, 'Role of monocytes in mediating HIV-specific antibody-dependent cellular cytotoxicity', Journal of Immunological Methods, 384, pp. 51 - 61, http://dx.doi.org/10.1016/j.jim.2012.07.006
Wren LH; Chung AW; Isitman G; Kelleher AD; Parsons MS; Amin J; Cooper DA; Stratov SI; Navis M; Kent SJ, 2012, 'Specific antibody-dependent cellular cytotoxicity responses associated with slow progression of HIV infection', Immunology, 138, pp. 116 - 123, http://dx.doi.org/10.1111/imm.12016
Cordery D; Martin A; Kelleher AD; Emery S; Cooper DA, 2012, 'The influence of HLA supertype on thymidine analogue associated with low peripheral fat in HIV.', AIDS, 26, pp. 2337 - 2344, http://dx.doi.org/10.1097/QAD.0b013e32835ab213
Swaminathan S; Kelleher AD; Murray DD, 2012, 'The role of microRNAs in HIV-1 pathogenesis and therapy', AIDS, 26, pp. 1325 - 1334, http://dx.doi.org/10.1097/QAD.0b013e328352adca
Brockman M; Chopera DR; Olvera A; Brumme C; Sela J; Markle TJ; Martin EPG; Carlson JM; Le AQ; Mcgovern R; Cheung PK; Kelleher AD; Jessen H; Markowitz M; Rosenberg E; Frahm N; Sanchez J; Mallal S; John M; Harrigan PR; Heckerman D; Brander C; Walker BD; Brummea ZL, 2012, 'Uncommon pathways of immune escape attenuate HIV-1 integrase replication capacity', Journal of Virology, 86, pp. 6913 - 6923, http://dx.doi.org/10.1128/JVI.07133-11
Byakwaga H; Kelly M; Purcell DFJ; French MA; Amin J; Lewin SR; Haskelberg H; Kelleher AD; Garsia R; Boyd MA; Cooper DA; Emery S, 2011, 'Intensification of Antiretroviral Therapy With Raltegravir or Addition of Hyperimmune Bovine Colostrum in HIV-Infected Patients With Suboptimal CD4+ T-Cell Response: A Randomized Controlled Trial', JOURNAL OF INFECTIOUS DISEASES, 204, pp. 1532 - 1540, http://dx.doi.org/10.1093/infdis/jir559
Jaffe HW; De Stavola BL; Carpenter LM; Porter K; Cox DR, 2011, 'Immune reconstitution and risk of Kaposi sarcoma and non-Hodgkin lymphoma in HIV-infected adults', AIDS, 25, pp. 1395 - 1403, http://dx.doi.org/10.1097/qad.0b013e3283489c8b
Sauce D; Larsen M; Fastenackels S; Pauchard M; Ait-Mohand H; Schneider L; Guihot A; Boufassa F; Zaunders J; Iguertsira M; Bailey M; Gorochov G; Duvivier C; Carcelain G; Kelleher AD; Simon A; Meyer L; Costagliola D; Deeks SG; Lambotte O; Autran B; Hunt PW; Katlama C; Appay V, 2011, 'HIV disease progression despite suppression of viral replication is associated with exhaustion of lymphopoiesis', Blood, 117, pp. 5142 - 5151, http://dx.doi.org/10.1182/blood-2011-01-331306
Matthews PC; Leslie AJ; Katzourakis A; Crawford H; Payne R; Prendergast A; Power K; Kelleher AD; Klenerman P; Carlson J; Heckerman D; Ndung'u T; Walker BD; Allen TM; Pybus OG; Goulder PJR, 2011, 'HLA footprints on human immunodeficiency virus type 1 are associated with interclade polymorphisms and intraclade phylogenetic clustering', Journal of Virology, 85, pp. 4635, http://dx.doi.org/10.1128/JVI.00375-11
Hemelaar J; Gouws E; Ghys PD; Osmanov S; Isolation and Characterisation W-UNFH, 2011, 'Global trends in molecular epidemiology of HIV-1 during 2000–2007', AIDS, 25, pp. 679 - 689, http://dx.doi.org/10.1097/qad.0b013e328342ff93
Cordery DV; Humphries A; Amin J; Kelleher AD; Emery S; Cooper DA, 2011, 'The influence of HLA supertype on thymidine analogue induced body composition changes in STEAL', ANTIVIRAL THERAPY, 16, pp. A20 - A21, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000294375900025&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
Chung AW; Navis M; Isitman G; Centre R; Finlayson RJ; Bloch M; Gelgor L; Kelleher AD; Kent SJ; Stratov I, 2011, 'Activation of NK cells by ADCC responses during early HIV infection', Viral Immunology, 24, pp. 171 - 175, http://dx.doi.org/10.1089/vim.2010.0108
Sutcliffe E; Bunting KL; He YQ; Li J; Phetsouphanh C; Seddiki N; Zafar A; Hindmarsh EJ; Parish CR; Kelleher AD; Mcinnes RL; Taya T; Milburn PJ; Rao S, 2011, 'Chromatin-Associated Protein Kinase C-è Regulates an Inducible Gene Expression Program and MicroRNAs in Human T Lymphocytes', Molecular Cell, 41, pp. 704 - 719, http://dx.doi.org/10.1016/j.molcel.2011.02.030
Iglesias MA; Almeida JR; Fastenackels S; Van Bockel DJ; Hashimoto M; Venturi V; Gostick E; Urrutia A; Wooldridge L; Clement M; Gras S; Wilmann P; Autran B; Moris A; Rossjohn J; Davenport MP; Takiguchi M; Brander C; Douek D; Kelleher AD; Price DA; Appay V, 2011, 'Escape from highly effective public CD8+ T-cell clonotypes by HIV', Blood, 118, pp. 2138 - 2149, http://dx.doi.org/10.1182/blood-2011-01-328781
Van Bockel DJ; Ammaranond P; Petoumenos K; Mcmurchie M; Finlayson RJ; Middleton MG; Davenport ; Venturi V; Suzuki K; Gelgor L; Kaldor JM; Cooper DA; Kelleher AD, 2011, 'HIV immune escape at an immunodominant epitope in HLA-B*27-positive individuals predicts viral load outcome', Journal of Immunology, 186, pp. 479 - 488, http://www.jimmunol.org/content/186/1/479
Munier CM; Andersen CR; Kelleher , 2011, 'HIV vaccines: Progress to date', Drugs, 71, pp. 387 - 414, http://adisonline.com/drugs/Abstract/2011/71040/HIV_Vaccines__Progress_to_Date.2.aspx
Sirivichayakul S; Thantiworasit P; Chatkulkawin P; Buranapraditkun S; Munier ML; Kelleher AD; Ruxrungtham K, 2011, 'Immunogenicity assay validation for an HIV vaccine trial: High IFNã+/IL-2+ CD8+ T cells background in healthy Thais', Vaccine, 29, pp. 6002 - 6007, http://dx.doi.org/10.1016/j.vaccine.2011.06.035
Murray JM; Kelleher ; Cooper DA, 2011, 'Timing of the components of the HIV life cycle in productively infected CD4+ T cells in a population of HIV-infected individuals', Journal of Virology, 85, pp. 10798 - 10805, http://dx.doi.org/10.1128/JVI.05095-11
Suzuki K; Ishida T; Yamagishi M; Ahlenstiel C; Swaminathan S; Marks K; Murray D; McCartney EM; Beard MR; Alexander M; Purcell DF; Cooper DA; Watanabe T; Kelleher AD, 2011, 'Transcriptional gene silencing of HIV-1 through promoter targeted RNA is highly specific.', RNA biology, 8, pp. 1035 - 1046
Arnott A; Jardine D; Wilson K; Gorry PR; Merlin K; Grey P; Law MG; Dax EM; Kelleher AD; Smith DE; McPhee DA, 2010, 'High viral fitness during acute HIV-1 infection', Plos One, 5, pp. 1 - 12, http://dx.doi.org/10.1371/journal.pone.0012631
Swaminathan S; Hood CL; Suzuki K; Kelleher AD, 2010, 'RNA duplexes in transcriptional regulation', Biomolecular Concepts, 1, pp. 285 - 296, http://dx.doi.org/10.1515/bmc.2010.021
French MA; Tanaskovic S; Law MG; Lim A; Fernandez S; Ward LD; Kelleher AD; Emery S, 2010, 'Vaccine-induced IgG2 anti-HIV p24 is associated with control of HIV in patients with a 'high-affinity' FcγRIIa genotype', AIDS, 24, pp. 1983 - 1990, http://dx.doi.org/10.1097/QAD.0b013e32833c1ce0
Pett SL; Zaunders J; Bailey M; Murray JM; Macrae K; Emery S; Cooper DA; Kelleher AD, 2010, 'A novel Chemokine-Receptor-5 (CCR5) blocker, SCH532706, has differential effects on CCR5+CD4+ and CCR5+CD8+ T cell numbers in chronic HIV infection', AIDS Research and Human Retroviruses, 26, pp. 653 - 661, http://dx.doi.org/10.1089/aid.2009.0278
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https://orcid.org/0000-0002-0009-3337