By Dr Abu Sina

Book Chapters

Wuethrich A; Dey S; Koo KM; Sina AAI; Trau M, 2021, 'Simultaneous BRAFV600E Protein and DNA Aberration Detection in Circulating Melanoma Cells Using an Integrated Multimolecular Sensor', in Methods in Molecular Biology, pp. 265 - 276, http://dx.doi.org/10.1007/978-1-0716-1205-7_20

Hossain T; Ahmed S; Syfuddin HM; Sina AAI, 2019, '2D nanomaterials for quantitative and qualitative analysis of DNA methylation', in Biomedical Applications of Graphene and 2d Nanomaterials, pp. 235 - 247, http://dx.doi.org/10.1016/B978-0-12-815889-0.00011-8

Ibn Sina AA; Koo KM; Ahmed M; Carrascosa LG; Trau M, 2018, 'Interfacial biosensing: Direct biosensing of biomolecules at the bare metal interface', in Encyclopedia of Interfacial Chemistry Surface Science and Electrochemistry, pp. 269 - 277, http://dx.doi.org/10.1016/B978-0-12-409547-2.14188-5

Journal articles

Zhang Z; Ahmed E; Constantin N; Lu J; Portelli S; Ascher DB; Korbie D; Wuethrich A; Sina AAI; Trau M, 2026, 'Tracking breast cancer progression using Methylscape.', Sci Adv, 12, pp. eaeb6556, http://dx.doi.org/10.1126/sciadv.aeb6556

Khamis R; Wu Y; Sina AAI; Trau M; Wuethrich A, 2026, 'Nanobiosensors and Artificial Intelligence Strategies for Glycan Profiling in Cancer Progression: A Critical Review', ACS Sensors, 11, pp. 2899 - 2922, http://dx.doi.org/10.1021/acssensors.5c04911

Islam DZ; Tamanna FS; Fuad M; Shanta MSA; Khanom A; Hasan MM; Sujan MSI; Khandker SS; Reza MS; Akter S; Ahmed MF; Azmuda N; Adnan N; Sina AAI, 2026, 'Monkeypox (Mpox), a Resurging Global Public Health Concern: An Updated Outlook Through 2025', Current Issues in Molecular Biology, 48, http://dx.doi.org/10.3390/cimb48040340

Ali MY; Sina AAI; Khandker SS; Neesa L; Tanvir EM; Kabir A; Khalil MI; Gan SH, 2026, 'Correction: Nutritional Composition and Bioactive Compounds in Tomatoes and Their Impact on Human Health and Disease: A Review (Foods, (2020), 10, 1, (45), 10.3390/foods10010045)', Foods, 15, http://dx.doi.org/10.3390/foods15030590

Ahmed E; Masud MK; Wuethrich A; Edwardraja S; Dey S; Hasan M; Hossain MSA; Yamauchi Y; Trau M; Sina AAI, 2025, 'Ultrasensitive multiplex detection of lung cancer EV-associated immune checkpoints using a mesoporous gold enhanced SERS biosensor', Nanoscale, 17, pp. 28143 - 28154, http://dx.doi.org/10.1039/d5nr03653d

Choudhury A; Linne K; Bulfone TC; Hossain T; Sina AAI; Bickler PL; Fry BG; Lewin MR, 2025, 'Electrical Cell Impedance Sensing (ECIS): Feasibility of a Novel In Vitro Approach to Studying Venom Toxicity and Potential Therapeutics', Toxins, 17, http://dx.doi.org/10.3390/toxins17040193

Sheikh MR; Mahmud HH; Hossen MS; Saha D; Uddin ME; Hossain MF; Munshi MK; Sina AAI, 2025, 'Modeling the Interactions Between Chemicals and Proteins to Predict the Health Consequences of Air Pollution', International Journal of Environmental Research and Public Health, 22, http://dx.doi.org/10.3390/ijerph22030418

Uddin ME; Sheikh MR; Asaduzzaman M; Ahmed S; Kundu SK; Sina AAI, 2025, 'Identification and Characterization of a Protease Producing Bacillus cereus Strain From Tannery Waste for Efficient Dehairing of Goat Skin', Biomed Research International, 2025, http://dx.doi.org/10.1155/bmri/7639181

Jakaria Al-Mujahidy SKMD; Kryukov K; Ikeo K; Saito K; Uddin ME; Sina AAI, 2024, 'Functional genomic analysis of the isolated potential probiotic Lactobacillus delbrueckii subsp. indicus TY-11 and its comparison with other Lactobacillus delbrueckii strains', Microbiology Spectrum, 12, http://dx.doi.org/10.1128/spectrum.03470-23

Shanmugasundaram KB; Ahmed E; Miao X; Kulasinghe A; Fletcher JA; Monkman J; Mainwaring P; Masud MK; Park H; Hossain MSA; Yamauchi Y; Sina AAI; O’Byrne K; Wuethrich A; Trau M, 2024, 'A Mesoporous Gold Sensor Unveils Phospho PD-L1 in Extracellular Vesicles as a Proxy for PD-L1 Expression in Lung Cancer Tissue', ACS Sensors, 9, pp. 3009 - 3016, http://dx.doi.org/10.1021/acssensors.4c00192

Ahmed E; Masud MK; Komatineni P; Dey S; Lobb R; Hossain MSA; Möller A; Yamauchi Y; Sina AAI; Trau M, 2024, 'A mesoporous gold biosensor to investigate immune checkpoint protein heterogeneity in single lung cancer cells', Biosensors and Bioelectronics, 249, http://dx.doi.org/10.1016/j.bios.2023.115984

Ahmed E; Shanmugasundaram KB; Li J; Behren A; Lobb R; Möller A; Wuethrich A; Dey S; Sina AAI; Trau M, 2023, 'A Microfluidic Liquid Biopsy Platform to Monitor Protein Biomarker Heterogeneity in Single Circulating Therapy-Resistance Cancer Cell', Advanced Sensor Research, 2, http://dx.doi.org/10.1002/adsr.202300059

Khamis R; Shanmugasundaram KB; Zhou Q; Lu J; Zhang Z; Hill MM; Sina AAI; Trau M; Wuethrich A, 2023, 'Multiplex SERS-Lectin-Immunoassay for Esophageal Adenocarcinoma Screening', ACS Applied Nano Materials, 6, pp. 20190 - 20197, http://dx.doi.org/10.1021/acsanm.3c03987

Ahmed M; Wuethrich A; Constantin N; Shanmugasundaram KB; Mainwaring P; Kulasinghe A; O’Leary C; O’Byrne K; Sina AAI; Carrascosa LG; Trau M, 2023, 'Liquid Biopsy Snapshots of Key Phosphoproteomic Pathways in Lung Cancer Patients for Diagnosis and Therapy Monitoring', Analytical Chemistry, 95, pp. 8522 - 8532, http://dx.doi.org/10.1021/acs.analchem.3c00519

Li J; Sina AAI; Antaw F; Fielding D; Möller A; Lobb R; Wuethrich A; Trau M, 2023, 'Digital Decoding of Single Extracellular Vesicle Phenotype Differentiates Early Malignant and Benign Lung Lesions', Advanced Science, 10, http://dx.doi.org/10.1002/advs.202204207

Kebede T; Melak T; Sina AAI; Fasil A, 2022, 'Assessment of Serum Uric Acid, Urea, and Glucose Levels and Associated Factors among Breast Cancer Patients Attending A Tertiary Hospital in Bahirdar, Ethiopia: A Comparative Cross-Sectional Study', Ethiopian Journal of Health Sciences, 32, pp. 1183 - 1192, http://dx.doi.org/10.4314/ejhs.v32i6.16

Nishat ZS; Hossain T; Islam MN; Phan HP; Wahab MA; Moni MA; Salomon C; Amin MA; Sina AAI; Hossain MSA; Kaneti YV; Yamauchi Y; Masud MK, 2022, 'Hydrogel Nanoarchitectonics: An Evolving Paradigm for Ultrasensitive Biosensing', Small, 18, http://dx.doi.org/10.1002/smll.202107571

Dey S; Ahmed E; Somvanshi PS; Sina AAI; Wuethrich A; Trau M, 2022, 'An Electrochemical and Raman Scattering Dual Detection Biosensor for Rapid Screening and Biomolecular Profiling of Cancer Biomarkers', Chemosensors, 10, http://dx.doi.org/10.3390/chemosensors10030093

Constantin N; Sina AAI; Korbie D; Trau M, 2022, 'Opportunities for Early Cancer Detection: The Rise of ctDNA Methylation-Based Pan-Cancer Screening Technologies', Epigenomes, 6, http://dx.doi.org/10.3390/epigenomes6010006

Shanmugasundaram KB; Li J; Sina AI; Wuethrich A; Trau M, 2022, 'Toward precision oncology: SERS microfluidic systems for multiplex biomarker analysis in liquid biopsy', Materials Advances, 3, pp. 1459 - 1471, http://dx.doi.org/10.1039/d1ma00848j

Li J; Wuethrich A; Sina AAI; Cheng HH; Wang Y; Behren A; Mainwaring PN; Trau M, 2021, 'A digital single-molecule nanopillar SERS platform for predicting and monitoring immune toxicities in immunotherapy', Nature Communications, 12, http://dx.doi.org/10.1038/s41467-021-21431-w

Wang J; Wuethrich A; Lobb RJ; Antaw F; Sina AAI; Lane RE; Zhou Q; Zieschank C; Bell C; Bonazzi VF; Aoude LG; Everitt S; Yeo B; Barbour AP; Möller A; Trau M, 2021, 'Characterizing the Heterogeneity of Small Extracellular Vesicle Populations in Multiple Cancer Typesviaan Ultrasensitive Chip', ACS Sensors, 6, pp. 3182 - 3194, http://dx.doi.org/10.1021/acssensors.1c00358

Khalil I; Yehye WA; Muhd Julkapli N; Ibn Sina AA; Islam Chowdhury F; Khandaker MU; Hsiao VKS; Basirun WJ, 2021, 'Simultaneous detection of dual food adulterants using graphene oxide and gold nanoparticle based surface enhanced Raman scattering duplex DNA biosensor', Vibrational Spectroscopy, 116, http://dx.doi.org/10.1016/j.vibspec.2021.103293

Reza KK; Dey S; Wuethrich A; Jing Wang ; Behren A; Antaw F; Wang Y; Sina AAI; Trau M, 2021, 'In Situ Single Cell Proteomics Reveals Circulating Tumor Cell Heterogeneity during Treatment', ACS Nano, 15, pp. 11231 - 11243, http://dx.doi.org/10.1021/acsnano.0c10008

Wahab MA; Karim MR; Aijaz MO; Salahuddin B; Aziz S; Sina AAI, 2021, 'A study on the interfacial compatibility, microstructure and physico-chemical properties of polyimide/organically modified silica nanocomposite membrane', Polymers, 13, http://dx.doi.org/10.3390/polym13081328

Ali MY; Sina AAI; Khandker SS; Neesa L; Tanvir EM; Kabir A; Khalil MI; Gan SH, 2021, 'Nutritional composition and bioactive compounds in tomatoes and their impact on human health and disease: A review', Foods, 10, http://dx.doi.org/10.3390/foods10010045

Masud MK; Na J; Lin TE; Malgras V; Preet A; Ibn Sina AA; Wood K; Billah M; Kim J; You J; Kani K; Whitten AE; Salomon C; Nguyen NT; Shiddiky MJA; Trau M; Hossain MSA; Yamauchi Y, 2020, 'Nanostructured mesoporous gold biosensor for microRNA detection at attomolar level', Biosensors and Bioelectronics, 168, http://dx.doi.org/10.1016/j.bios.2020.112429

Ahmed E; Masud MK; Hossain MSA; Na J; Sina AAI; Yamauchi Y; Trau M, 2020, 'Nanostructured mesoporous gold electrodes detect protein phosphorylation in cancer with electrochemical signal amplification', Analyst, 145, pp. 6639 - 6648, http://dx.doi.org/10.1039/d0an01096k

Sina AAI; Lin TY; Vaidyanathan R; Wang Z; Dey S; Wang J; Behren A; Wuethrich A; Carrascosa LG; Trau M, 2020, 'Methylation dependent gold adsorption behaviour identifies cancer derived extracellular vesicular DNA', Nanoscale Horizons, 5, pp. 1317 - 1323, http://dx.doi.org/10.1039/d0nh00258e

Li J; Wuethrich A; Dey S; Lane RE; Sina AAI; Wang J; Wang Y; Puttick S; Koo KM; Trau M, 2020, 'The Growing Impact of Micro/Nanomaterial-Based Systems in Precision Oncology: Translating “Multiomics” Technologies', Advanced Functional Materials, 30, http://dx.doi.org/10.1002/adfm.201909306

Kumar AR; Shanmugasundaram KB; Li J; Zhang Z; Ibn Sina AA; Wuethrich A; Trau M, 2020, 'Ultrasensitive melanoma biomarker detection using a microchip SERS immunoassay with anisotropic Au-Ag alloy nanoboxes', Rsc Advances, 10, pp. 28778 - 28785, http://dx.doi.org/10.1039/d0ra05032f

Khalil I; Yehye WA; Muhd Julkapli N; Sina AAI; Rahmati S; Basirun WJ; Seyfoddin A, 2020, 'Dual platform based sandwich assay surface-enhanced Raman scattering DNA biosensor for the sensitive detection of food adulteration', Analyst, 145, pp. 1414 - 1426, http://dx.doi.org/10.1039/c9an02106j

Wang J; Wuethrich A; Sina AAI; Lane RE; Lin LL; Wang Y; Cebon J; Behren A; Trau M, 2020, 'Tracking extracellular vesicle phenotypic changes enables treatment monitoring in melanoma', Science Advances, 6, http://dx.doi.org/10.1126/sciadv.aax3223

Wuethrich A; Rajkumar AR; Shanmugasundaram KB; Reza KK; Dey S; Howard CB; Sina AAI; Trau M, 2019, 'Single droplet detection of immune checkpoints on a multiplexed electrohydrodynamic biosensor', Analyst, 144, pp. 6914 - 6921, http://dx.doi.org/10.1039/c9an01450k

Sina AAI; Carrascosa LG; Trau M, 2019, 'DNA Methylation-Based Point-of-Care Cancer Detection: Challenges and Possibilities', Trends in Molecular Medicine, 25, pp. 955 - 966, http://dx.doi.org/10.1016/j.molmed.2019.05.014

Khondakar KR; Dey S; Wuethrich A; Sina AAI; Trau M, 2019, 'Toward Personalized Cancer Treatment: From Diagnostics to Therapy Monitoring in Miniaturized Electrohydrodynamic Systems', Accounts of Chemical Research, 52, pp. 2113 - 2123, http://dx.doi.org/10.1021/acs.accounts.9b00192

Khalil I; Yehye WA; Julkapli NM; Rahmati S; Sina AAI; Basirun WJ; Johan MR, 2019, 'Graphene oxide and gold nanoparticle based dual platform with short DNA probe for the PCR free DNA biosensing using surface-enhanced Raman scattering', Biosensors and Bioelectronics, 131, pp. 214 - 223, http://dx.doi.org/10.1016/j.bios.2019.02.028

Dey S; Vaidyanathan R; Reza KK; Wang J; Wang Y; Nel HJ; Law SC; Tyler J; Rossjohn J; Reid HH; Ibn Sina AA; Thomas R; Trau M, 2019, 'A microfluidic-SERSplatform for isolation and immuno-phenotyping of antigen specific T-cells', Sensors and Actuators B Chemical, 284, pp. 281 - 288, http://dx.doi.org/10.1016/j.snb.2018.12.099

Dey S; Koo KM; Wang Z; Sina AAI; Wuethrich A; Trau M, 2019, 'An integrated multi-molecular sensor for simultaneous BRAFV600E protein and DNA single point mutation detection in circulating tumour cells', Lab on A Chip, 19, pp. 738 - 748, http://dx.doi.org/10.1039/c8lc00991k

Sina AAI; Vaidyanathan R; Wuethrich A; Carrascosa LG; Trau M, 2019, 'Label-free detection of exosomes using a surface plasmon resonance biosensor', Analytical and Bioanalytical Chemistry, 411, pp. 1311 - 1318, http://dx.doi.org/10.1007/s00216-019-01608-5

Reza KK; Sina AAI; Wuethrich A; Grewal YS; Howard CB; Korbie D; Trau M, 2019, 'A SERS microfluidic platform for targeting multiple soluble immune checkpoints', Biosensors and Bioelectronics, 126, pp. 178 - 186, http://dx.doi.org/10.1016/j.bios.2018.10.044

Dey S; Kamil Reza K; Wuethrich A; Korbie D; Ibn Sina AA; Trau M, 2019, 'Tracking antigen specific T-cells: Technological advancement and limitations', Biotechnology Advances, 37, pp. 145 - 153, http://dx.doi.org/10.1016/j.biotechadv.2018.11.010

Sina AAI; Carrascosa LG; Liang Z; Grewal YS; Wardiana A; Shiddiky MJA; Gardiner RA; Samaratunga H; Gandhi MK; Scott RJ; Korbie D; Trau M, 2018, 'Epigenetically reprogrammed methylation landscape drives the DNA self-assembly and serves as a universal cancer biomarker', Nature Communications, 9, http://dx.doi.org/10.1038/s41467-018-07214-w

Reza KK; Dey S; Wuethrich A; Sina AAI; Korbie D; Wang Y; Trau M, 2018, 'Parallel profiling of cancer cells and proteins using a graphene oxide functionalized ac-EHD SERS immunoassay', Nanoscale, 10, pp. 18482 - 18491, http://dx.doi.org/10.1039/c8nr02886a

Wuethrich A; Sina AAI; Ahmed M; Lin TY; Carrascosa LG; Trau M, 2018, 'Interfacial nano-mixing in a miniaturised platform enables signal enhancement and: In situ detection of cancer biomarkers', Nanoscale, 10, pp. 10884 - 10890, http://dx.doi.org/10.1039/c7nr09496e

Sina AAI; Foster MT; Korbie D; Carrascosa LG; Shiddiky MJA; Gao J; Dey S; Trau M, 2017, 'A multiplex microplatform for the detection of multiple DNA methylation events using gold-DNA affinity', Analyst, 142, pp. 3573 - 3578, http://dx.doi.org/10.1039/c7an00611j

Ahmed M; Carrascosa LG; Ibn Sina AA; Zarate EM; Korbie D; Ru KL; Shiddiky MJA; Mainwaring P; Trau M, 2017, 'Detection of aberrant protein phosphorylation in cancer using direct gold-protein affinity interactions', Biosensors and Bioelectronics, 91, pp. 8 - 14, http://dx.doi.org/10.1016/j.bios.2016.12.012

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