By Dr Alice Michie

Journal articles

Ernst T; Michie A; Sikazwe C; Nicholson J; Levy A; Chua ILJ; Mackenzie JS; Smith DW; Imrie A, 2025, 'Genetic diversity of Murray Valley encephalitis virus 1951–2020 identified via phylogenetic and evolutionary analyses', Plos Neglected Tropical Diseases, 19, http://dx.doi.org/10.1371/journal.pntd.0013181

Michie A, 2024, 'Wastewater-based SARS-CoV-2 surveillance and sequencing', Microbiology Australia, 45, pp. 8 - 12, http://dx.doi.org/10.1071/MA24004

Michie A; Ernst T; Pyke AT; Nicholson J; Mackenzie JS; Smith DW; Imrie A, 2024, 'Genomic Analysis of Sindbis Virus Reveals Uncharacterized Diversity within the Australasian Region, and Support for Revised SINV Taxonomy', Viruses, 16, http://dx.doi.org/10.3390/v16010007

Pyke AT; Wilson DJ; Michie A; Mackenzie JS; Imrie A; Cameron J; Doggett SL; Haniotis J; Herrero LJ; Caly L; Lynch SE; Mee PT; Madzokere ET; Ramirez AL; Paramitha D; Hobson-Peters J; Smith DW; Weir R; Sullivan M; Druce J; Melville L; Robson J; Gibb R; Van Den Hurk AF; Duchene S, 2024, 'Independent repeated mutations within the alphaviruses Ross River virus and Barmah Forest virus indicates convergent evolution and past positive selection in ancestral populations despite ongoing purifying selection', Virus Evolution, 10, http://dx.doi.org/10.1093/ve/veae080

Tulloch RL; Kim K; Sikazwe C; Michie A; Burrell R; Holmes EC; Dwyer DE; Britton PN; Kok J; Eden JS, 2023, 'RAPIDprep: A Simple, Fast Protocol for RNA Metagenomic Sequencing of Clinical Samples', Viruses, 15, http://dx.doi.org/10.3390/v15041006

Eden JS; Sikazwe C; Xie R; Deng YM; Sullivan SG; Michie A; Levy A; Cutmore E; Blyth CC; Britton PN; Crawford N; Dong X; Dwyer DE; Edwards KM; Horsburgh BA; Foley D; Kennedy K; Minney-Smith C; Speers D; Tulloch RL; Holmes EC; Dhanasekaran V; Smith DW; Kok J; Barr IG; Alafaci A; Carter I; Daley A; Francis M; Kesson A; Moore H; Ngo C; Tran T, 2022, 'Off-season RSV epidemics in Australia after easing of COVID-19 restrictions', Nature Communications, 13, http://dx.doi.org/10.1038/s41467-022-30485-3

Sikazwe C; Neave MJ; Michie A; Mileto P; Wang J; Cooper N; Levy A; Imrie A; Baird RW; Currie BJ; Speers D; Mackenzie JS; Smith DW; Williams DT, 2022, 'Molecular detection and characterisation of the first Japanese encephalitis virus belonging to genotype IV acquired in Australia', Plos Neglected Tropical Diseases, 16, http://dx.doi.org/10.1371/journal.pntd.0010754

Harapan H; Panta K; Michie A; Ernst T; McCarthy S; Muhsin M; Safarianti S; Zanaria TM; Mudatsir M; Sasmono RT; Imrie A, 2022, 'Hyperendemic Dengue and Possible Zika Circulation in the Westernmost Region of the Indonesian Archipelago', Viruses, 14, http://dx.doi.org/10.3390/v14020219

Harapan H; Michie A; Ernst T; Panta K; Mudatsir M; Yohan B; Haryanto S; McCarthy S; Sasmono RT; Imrie A, 2022, 'Co-Circulation of Chikungunya and Multiple DENV Serotypes and Genotypes, Western Indonesia 2015–2016', Viruses, 14, http://dx.doi.org/10.3390/v14010099

Michie A; Mackenzie JS; Smith DW; Imrie A, 2021, 'Genome sequence analysis of first ross river virus isolate from papua new guinea indicates long-term, local evolution', Viruses, 13, http://dx.doi.org/10.3390/v13030482

Harapan H; Michie A; Sasmono RT; Imrie A, 2020, 'Dengue: A minireview', Viruses, 12, http://dx.doi.org/10.3390/v12080829

Michie A; Ernst T; Chua ILJ; Lindsay MDA; Neville PJ; Nicholson J; Jardine A; Mackenzie JS; Smith DW; Imrie A, 2020, 'Phylogenetic and Timescale Analysis of Barmah Forest Virus as Inferred from Genome Sequence Analysis', Viruses, 12, http://dx.doi.org/10.3390/v12070732

Michie A; Dhanasekaran V; Lindsay MDA; Neville PJ; Nicholson J; Jardine A; Mackenzie JS; Smith DW; Imrie A, 2020, 'Genome-scale phylogeny and evolutionary analysis of Ross River virus reveals periodic sweeps of lineage dominance in Western Australia, 1977–2014', Journal of Virology, 94, http://dx.doi.org/10.1128/JVI.01234-19

Harapan H; Michie A; Yohan B; Shu PY; Mudatsir M; Sasmono RT; Imrie A, 2019, 'Dengue viruses circulating in Indonesia: A systematic review and phylogenetic analysis of data from five decades', Reviews in Medical Virology, 29, http://dx.doi.org/10.1002/rmv.2037

Harapan H; Michie A; Mudatsir M; Sasmono RT; Imrie A, 2019, 'Epidemiology of dengue hemorrhagic fever in Indonesia: Analysis of five decades data from the National Disease Surveillance', BMC Research Notes, 12, http://dx.doi.org/10.1186/s13104-019-4379-9

Harapan H; Michie A; Mudatsir M; Nusa R; Yohan B; Wagner AL; Sasmono RT; Imrie A, 2019, 'Chikungunya virus infection in Indonesia: A systematic review and evolutionary analysis', BMC Infectious Diseases, 19, http://dx.doi.org/10.1186/s12879-019-3857-y

Back to profile page