Researcher

Dr Emily Cathlin Oates

Biography

Dr Emily Oates is a Senior Lecturer in Medical Genomics, head of the UNSW Medical Genomics Group, an NHMRC Neil Hamilton Fairley Early Career Research Fellow and a neurogenetics consultant for The Sydney Children’s Hospital Network. She has over 10 years of clinical experience in the diagnosis and management of infants and children with neuromuscular disorders. She also has extensive expertise in the clinical characterisation of new...view more

Dr Emily Oates is a Senior Lecturer in Medical Genomics, head of the UNSW Medical Genomics Group, an NHMRC Neil Hamilton Fairley Early Career Research Fellow and a neurogenetics consultant for The Sydney Children’s Hospital Network. She has over 10 years of clinical experience in the diagnosis and management of infants and children with neuromuscular disorders. She also has extensive expertise in the clinical characterisation of new neuromuscular disorders and the analysis of human genomic data for diagnostic and gene discovery purposes.

She currently holds an NHMRC Neil Hamilton Fairley Early Career Fellowship. This fellowship is focused on harnessing state-of-the-art massively parallel DNA and RNA sequencing technologies to improve genetic diagnosis rates for patients with neuromuscular disorders and to identify new disease-causing genes. During her time as ECR Fellow, Dr Oates contributed to the discovery and characterisation of several new neuromuscular disease genes and genetic disorders including BICD2-spinal muscular atrophy and SCN4A-congenital myopathy. In 2018 she led an 84-member-strong collaboration aimed at providing the first definitive description of a new muscle disease, congenital titinopathy.

Research activities

Currently, Dr Oates is involved in several subsequent projects further characterising the clinical, genetic, and molecular features of titinopathies. Her research involves utilising whole exome and whole genome massively parallel sequencing trio analysis for pathogenic gene discovery and characterisation of titin mutations. In addition, Dr Oates and her Medical Genomics Group use human RNA sequencing data as a diagnostic tool to confirm the impacts of cryptic splice mutations and to determine the exons and isoforms which are critical to striated muscle development and pathology.

Dna man

The UNSW Medical Genomics Group is focused on the discovery of new human disease genes and on the analysis of the clinical-, RNA transcript-, protein- and tissue-level impacts of disease-causing mutations within known and emerging human disease genes. We use this information to increase genetic diagnosis rates for affected individuals and their families, to advance our understanding of the clinical characteristics, natural history, and underlying pathogenesis of the genetic disorders we study, and to develop potential new therapies for these disorders.

Current positions

  • UNSW Senior Lecturer (Medical Genomics) & Research Team Leader
  • Clinical Geneticist (HGSA)
  • NHMRC Neil Hamilton Fairley Research Fellow
  • Honorary Staff Specialist (Sydney Children’s Hospital)
  • Honorary Fellow (Great Ormond Street Hospital, London)
  • Honorary Staff Specialist (Children’s Hospital at Westmead, Sydney)

Professional experience

Year Position Institution
2016-2017 NHMRC ECR clinical research fellow University College London & Great Ormond Street Hospital, London
2015-2016 Staff Specialist & NHMRC ECR clinical research fellow The Children’s Hospital at Westmead (CHW) &
Institute for Neuroscience and Muscle Research (INMR)
2014 May-Jul Staff Specialist (locum) Genetics of Learning Disability (GOLD) team: 
Royal North Shore Hospital (Sydney)
2010-2014 Neurogenetics fellow & PhD candidate The Children’s Hospital at Westmead & Institute for Neuroscience and Muscle Research
2007-2009 Advanced trainee: Clinical Genetics Sydney Children’s Hospital (2007) & The Children’s Hospital at Westmead (2008, 2009)
2004-2006 Paediatric Registrar Sydney Children’s Hospital
2003 Paediatric Resident Sydney Children’s Hospital
2001-2002 Intern and Medical Resident (RMO1) Prince of Wales Hospital & Sydney Children’s Hospital
1995-1996 Research assistant The Heart Research Institute

Areas of expertise

  • Genetics
  • Genomics
  • Transcriptomics
  • Neuromuscular disorders
  • Rare diseases
  • RNA sequencing
  • Whole genome sequencing
  • Diagnostics and disease characterisation
  • Striated muscle biology
  • Titin and titinopathies

My Awards

2016
European Neuromuscular Centre (ENMC) Young Scientist Fellowship
  World Muscle Society (WMS) Congress Fellowship Prize (Granada)
2014 NHMRC Neil Hamilton Fairley (Early Career Research) Fellowship
  WMS Congress Fellowship Prize and Elsevier Prize (Berlin)
2013 University of Sydney Medal: Best overall presentation: ASMR NSW Meeting
  Winston Churchill Memorial Trust Travelling Fellowship
  Best oral presentation award: World Muscle Society Congress (California)
  Dean's Prize for Best Sydney Medical School research student publication
  Oral presentation prize: USyd Postgraduate Student Conference (Sydney)
2012 Oral presentation prize: USyd Postgraduate Student Conference (Sydney)
  Student poster prize: GAGE muscle conference (Canberra)
2011 First prize: student oral presentation: HGSA conference (Gold Coast)
  WMS Fellowship Prize (Portugal)
2010                   NHMRC medical/dental postgraduate (PhD) scholarship                         
2009 Lea Rose Prize: Presenter of the most important contribution in SMA research
  World Muscle Fellowship Prize (Geneva)
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Location

Room 320C, Level 3,
Biological Sciences North Building D26
School of Biotechnology and Biomolecular Sciences