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Select Publications

Journal articles

Fraser MW; Martin BC; Wong HL; Burns BP; Kendrick GA, 2023, 'Sulfide intrusion in a habitat forming seagrass can be predicted from relative abundance of sulfur cycling genes in sediments', Science of the Total Environment, 864, http://dx.doi.org/10.1016/j.scitotenv.2022.161144

Ray AE; Zaugg J; Benaud N; Chelliah DS; Bay S; Wong HL; Leung PM; Ji M; Terauds A; Montgomery K; Greening C; Cowan DA; Kong W; Williams TJ; Hugenholtz P; Ferrari BC, 2022, 'Atmospheric chemosynthesis is phylogenetically and geographically widespread and contributes significantly to carbon fixation throughout cold deserts', ISME Journal, 16, pp. 2547 - 2560, http://dx.doi.org/10.1038/s41396-022-01298-5

Johnson MS; Burns BP; Herdean A; Angeloski A; Ralph P; Morris T; Kindler G; Wong HL; Kuzhiumparambil U; Sedger LM; Larkum AWD, 2022, 'A Cyanobacteria Enriched Layer of Shark Bay Stromatolites Reveals a New Acaryochloris Strain Living in Near Infrared Light', Microorganisms, 10, http://dx.doi.org/10.3390/microorganisms10051035

Nobs SJ; MacLeod FI; Wong HL; Burns BP, 2022, 'Eukarya the chimera: eukaryotes, a secondary innovation of the two domains of life?', Trends in Microbiology, 30, pp. 421 - 431, http://dx.doi.org/10.1016/j.tim.2021.11.003

Kindler GS; Wong HL; Larkum AWD; Johnson M; MacLeod FI; Burns BP, 2022, 'Genome-resolved metagenomics provides insights into the functional complexity of microbial mats in Blue Holes, Shark Bay', FEMS Microbiology Ecology, 98, http://dx.doi.org/10.1093/femsec/fiab158

Ji M; Williams TJ; Montgomery K; Wong HL; Zaugg J; Berengut JF; Bissett A; Chuvochina M; Hugenholtz P; Ferrari BC, 2021, 'Candidatus Eremiobacterota, a metabolically and phylogenetically diverse terrestrial phylum with acid-tolerant adaptations', ISME Journal, 15, pp. 2692 - 2707, http://dx.doi.org/10.1038/s41396-021-00944-8

Campbell MA; Grice K; Visscher PT; Morris T; Wong HL; White RA; Burns BP; Coolen MJL, 2020, 'Functional Gene Expression in Shark Bay Hypersaline Microbial Mats: Adaptive Responses', Frontiers in Microbiology, 11, http://dx.doi.org/10.3389/fmicb.2020.560336

Wong HL; MacLeod FI; White RA; Visscher PT; Burns BP, 2020, 'Microbial dark matter filling the niche in hypersaline microbial mats', Microbiome, 8, http://dx.doi.org/10.1186/s40168-020-00910-0

Chen R; Wong HL; Kindler GS; MacLeod FI; Benaud N; Ferrari BC; Burns BP, 2020, 'Discovery of an Abundance of Biosynthetic Gene Clusters in Shark Bay Microbial Mats', Frontiers in Microbiology, 11, http://dx.doi.org/10.3389/fmicb.2020.01950

Reinold M; Wong HL; MacLeod FI; Meltzer J; Thompson A; Burns BP, 2019, 'The vulnerability of microbial ecosystems in a changing climate: Potential impact in shark bay', Life, 9, http://dx.doi.org/10.3390/life9030071

Charlesworth JC; Watters C; Wong HL; Visscher PT; Burns BP, 2019, 'Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia', FEMS Microbiology Ecology, 95, http://dx.doi.org/10.1093/femsec/fiz035

Chen R; Wong HL; Burns BP, 2019, 'New Approaches to Detect Biosynthetic Gene Clusters in the Environment.', Medicines (Basel), 6, http://dx.doi.org/10.3390/medicines6010032

D'Agostino PM; Woodhouse JN; Liew HT; Sehnal L; Pickford R; Wong HL; Burns BP; Neilan BA, 2019, 'Bioinformatic, phylogenetic and chemical analysis of the UV-absorbing compounds scytonemin and mycosporine-like amino acids from the microbial mat communities of Shark Bay, Australia', Environmental Microbiology, 21, pp. 702 - 715, http://dx.doi.org/10.1111/1462-2920.14517

Macleod F; Kindler GS; Wong HL; Chen R; Burns BP, 2019, 'Asgard archaea: Diversity, function, and evolutionary implications in a range of microbiomes', AIMS Microbiology, 5, pp. 48 - 61, http://dx.doi.org/10.3934/microbiol.2019.1.48

Fisher A; Wangpraseurt D; Larkum AWD; Johnson M; Kühl M; Chen M; Wong HL; Burns BP, 2018, 'Correlation of bio-optical properties with photosynthetic pigment and microorganism distribution in microbial mats from Hamelin Pool, Australia', FEMS Microbiology Ecology, 95, http://dx.doi.org/10.1093/femsec/fiy219

Wong HL; White RA; Visscher PT; Charlesworth JC; Vázquez-Campos X; Burns BP, 2018, 'Disentangling the drivers of functional complexity at the metagenomic level in Shark Bay microbial mat microbiomes', ISME Journal, 12, pp. 2619 - 2639, http://dx.doi.org/10.1038/s41396-018-0208-8

White RA; Wong HL; Ruvindy R; Neilan BA; Burns BP, 2018, 'Viral communities of Shark Bay modern stromatolites', Frontiers in Microbiology, 9, pp. 1223, http://dx.doi.org/10.3389/fmicb.2018.01223

Wong HL; Visscher PT; White RA; Smith DL; Patterson MM; Burns BP, 2017, 'Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes', Scientific Reports, 7, pp. 46160, http://dx.doi.org/10.1038/srep46160

Wong HL; Ahmed-Cox A; Burns BP, 2016, 'Molecular ecology of hypersaline microbial mats: Current insights and new directions', Microorganisms, 4, pp. 6, http://dx.doi.org/10.3390/microorganisms4010006

Wong HL; Smith DL; Visscher PT; Burns BP, 2015, 'Niche differentiation of bacterial communities at a millimeter scale in Shark Bay microbial mats', Scientific Reports, 5, http://dx.doi.org/10.1038/srep15607

Preprints

Johnson MS; Burns B; Herdean A; Angeloski A; Ralph P; Morris T; Kindler G; Wong HL; Kuzhiumparambil U; Sedger L; Larkum AWD, 2022, A Cyanobacteria Enriched Layer of Shark Bay Stromatolites Reveals a New Acaryochloris strain Living in near Infrared Light, http://dx.doi.org/10.20944/preprints202204.0112.v1

Ray A; Zaugg J; Benaud N; Chelliah D; Bay S; Wong HL; Leung PM; Ji M; Terauds A; Montgomery K; Greening C; Cowan D; Kong W; Williams T; Hugenholtz P; Ferrari B, 2021, Atmospheric chemosynthesis is phylogenetically and geographically widespread and contributes significantly to carbon fixation throughout cold deserts, http://dx.doi.org/10.21203/rs.3.rs-948000/v1

Wong HL; MacLeod F; White RA; Visscher P; Burns B, 2020, Microbial dark matter filling the niche in hypersaline microbial mats, http://dx.doi.org/10.1101/2020.06.18.160598


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