By Dr Ling Zhong

Journal articles

Ling Z; Taylor D; Whittington R, 2008, 'Proteomic profiling of ovine serum by SELDI-TOF MS: optimization, reproducibility and feasibility of biomarker discovery using routinely collected samples', Comparative Immunology Microbiology and Infectious Diseases

Taylor D; Ling Z; Begg D; De Silva K; Whittington R, 2008, 'Toll-like receptor genes are differentially expressed at the sites of infection during the progression of Johne’s disease in outbred sheep', Veterinary Immunology and Immunopathology, 124, pp. 132 - 151

Conference Papers

Hewson C; Wong S; Awatade N; Bridge W; Jaffe A; Waters S, 2020, 'A NOVEL COMPOUND FOR CYSTIC FIBROSIS THERAPY, TARGETING THE PROTEOSTASIS NETWORK', in Respirology, Wiley, Melbourne, Australia_Cancelled due to COVID-19, presented at TSANZ20_The Thoracic Society of Australia and New Zealand (ANZSRS/TSANZ) Annual Scientific Meeting for Leaders in Lung Health, Melbourne, Australia_Cancelled due to COVID-19, http://dx.doi.org/10.1111/resp.13777

Coffey MJ; Zhong L; Jaffe A; Ooi CY; Waters S, 2019, 'THE INTESTINAL PROTEOME IN CHILDREN WITH CYSTIC FIBROSIS DIFFERS FROM HEALTHY CONTROLS', in PEDIATRIC PULMONOLOGY, WILEY, pp. S265 - S265, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000484544000385&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Coffey MJ; Zhong L; Jaffe A; Ooi CY; Waters S, 2019, 'Tu1872 – The Human Intestinal Proteome in Children with Cystic Fibrosis', in Gastroenterology, Elsevier, pp. s - 1153, http://dx.doi.org/10.1016/s0016-5085(19)39855-5

Coffey MJ; Zhong L; Jaffe A; Ooi CY; Waters S, 2018, 'The human intestinal proteome in children with cystic fibrosis', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, pp. 144 - 144, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000530647800252&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Wang P; Yang JYH; Raftery M; Zhong L; Wilson S, 2013, 'Latin Square dataset for evaluating the accuracy of mass spectrometry-based protein identification and quantification', in He X (ed.), 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2013), Shanghai, China, pp. 65 - 67, presented at 2013 IEEE International Conference on Bioinformatics and Biomedicine, Shanghai, China, 18 December 2013 - 21 December 2013

Velonas VM; Raftery M; Zhong L; Poljak A; Assinder S; Woo H; Remedios CD, 2012, 'Peptide-based mass spectrometry identification of exosome proteins from prostate cancer cell lines', in BJU INTERNATIONAL, WILEY-BLACKWELL, AUSTRALIA, Darwin, pp. 20 - 21, presented at 65th Annual Scientific Meeting on Urological-Society-of-Australia-and-New Zealand, AUSTRALIA, Darwin, 21 April 2012 - 24 April 2012, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000303003900030&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Conference Posters

MAsoudi S; Zhong L; Raftery M; willcox M, 2013, 'Method development for analysis of tear proteins using Multiple Reaction Monitoring', presented at Association for Research in Vision and Ophthalmology, 05 May 2013 - 09 May 2013

Conference Abstracts

Truong P; Shen S; Joshi S; Afrasiabi A; Zhong L; Raftery MJ; Larsson J; Lock RB; Walkley CR; Rokny HA; Thoms JAI; Jolly CJ; Pimanda JE, 2022, 'Genome-Wide CRISPR-Cas9 Screening Identifies a Synergy between Hypomethylating Agents and Sumoylation Blockade in Myelodysplastic Syndromes and Acute Myeloid Leukemia', in Blood, American Society of Hematology, Vol. 140, pp. 220 - 221, http://dx.doi.org/10.1182/blood-2022-165713

Dolai S; Sia KC; Robbins AK; Zhong L; Heatley S; Vincent T; Hochgräfe F; Kurmasheva RT; White DL; Houghton PJ; Smith MA; Teachey DT; Daly RJ; Raftery MJ; Lock RB, 2014, 'Targeted Cancer Therapy in High-Risk Pediatric Leukemia Using Global Phosphotyrosine Profiling', in Blood, American Society of Hematology, Vol. 124, pp. 969, http://dx.doi.org/10.1182/blood.v124.21.969.969

Jayasena T; Poljak A; Zhong L; Braidy N; Smythe G; Raftery M; Sachdev P, 2013, 'Development of a targeted mass spectrometry method for accurate quantification of human sirtuins in biological samples [Abstract P2-035]', in Alzheimer's & Dementia, Boston, MA, USA, Vol. 9, pp. P357 - P357, presented at Alzheimer’s Association International Conference (AAIC) 2013, Boston, MA, USA, 13 July 2013 - 18 July 2013, http://dx.doi.org/10.1016/j.jalz.2013.05.677

Working Papers

Capraro A; Wong SL; Adhikari A; Allan KM; Patel HR; Zhong L; Raftery M; Jaffe A; Yeang M; Aggarwal A; Wu L; Pandzic E; Whan RM; Turville S; Vittorio O; Bull RA; Kaakoush N; Rawlinson WD; Tedla N; Vafaee F; Waters SA, Ageing impairs the airway epithelium defence response to SARS-CoV-2, Cold Spring Harbor Laboratory, http://dx.doi.org10.1101/2021.04.05.437453

Preprints

Suyama H; Luu LDW; Zhong L; Raftery MJ; Lan R, 2024, Proteomic comparison of epidemic Australian Bordetella pertussis biofilm cells, http://dx.doi.org/10.1101/2024.02.19.581093

McIntyre K; Waters S; Zhong L; Hart-Smith G; Raftery M; Graves JM; Waters P, 2023, Functional coherence of the Xist and RSX protein interactomes: X chromosome inactivation in marsupials, http://dx.doi.org/10.1101/2023.10.08.560959

Suyama H; Luu LDW; Zhong L; Raftery MJ; Lan R, 2022, Integrating proteomic data with metabolic modelling provides insight into key pathways of Bordetella pertussis biofilms, http://dx.doi.org/10.1101/2022.05.27.493021

Truong P; Shen S; Joshi S; Islam I; Zhong L; Raftery MJ; Afrasiabi A; Alinejad-Rokny H; Nguyen M; Zou X; Bhuyan GS; Sarowar CH; Ghodousi ES; Stonehouse O; Mohamed S; Toscan CE; Connerty P; Kakadia PM; Bohlander SK; Michie KA; Larsson J; Lock RB; Walkley CR; Thoms JAI; Jolly CJ; Pimanda JE, Genome-Wide CRISPR-Cas9 Screening Identifies a Synergy between Hypomethylating Agents and SUMOylation Blockade in MDS/AML, http://dx.doi.org/10.1101/2024.04.17.589858

Mercier C; Thies D; Zhong L; Raftery MJ; Cavicchioli R; Erdmann S, In depth characterization of an archaeal virus-host system reveals numerous virus exclusion mechanisms, http://dx.doi.org/10.1101/2022.10.18.512658

Hewson CK; Capraro A; Wong SL; Pandzic E; Fernando BSM; Awatade NT; Zhong L; Hart-Smith G; Whan RM; Thomas SR; Jaffe A; Bridge WJ; Waters SA, Novel antioxidant therapy with the immediate precursor to glutathione, γ-glutamylcysteine (GGC), ameliorates LPS-induced cellular stress in an in vitro cystic fibrosis model, http://dx.doi.org/10.1101/2020.05.27.119990

Contreras O; Smith GD; Santiago C; Dey M; Thekkedam C; Chand R; González-Rajal Á; Zhong L; Lock JG; Wong E; Fatkin D; Harvey RP, Proteo-transcriptomics and morphometrics of teleost cardiac cells define regulatory networks and exercise-induced cardiomyocyte hypertrophy and hyperplasia, http://dx.doi.org/10.64898/2026.01.11.698907

Umashankar B; Capraro A; Vijayan A; Wong SL; Nielsen BU; Zhong L; Raftery M; Allan K; Ooi CY; Sivam S; Visser S; Prentice BJ; Fawcett L; Kovacevic Z; Eliasson L; Faurholt-Jepsen D; Jaffe A; Shaw JA; Vafaee F; Waters SA, Serum Exosomal Multi-Omic Signatures Stratify Glucose Tolerance in Cystic Fibrosis and Reveal Partial Therapeutic Reprogramming by CFTR Modulators, http://dx.doi.org/10.1101/2025.07.07.25331056

Awatade NT; Wong SL; Pandzic E; Slapetova I; Capraro A; Zhong L; Turgutoglu N; Fawcett LK; Whan RM; Jaffe A; Waters SA, Significant functional differences despite morphological and molecular similarity in fully differentiated matched Conditionally Reprogrammed (CRC) and Feeder free dual SMAD inhibited expanded human nasal epithelial cells, http://dx.doi.org/10.1101/2020.05.29.120006

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