Select Publications
Preprints
2024, A dissection of the genomic antimicrobial resistance epidemiology ofSalmonellaTyphimurium, http://dx.doi.org/10.1101/2024.05.12.593721
,2024, CharacterisingStaphylococcus aureusgenomic epidemiology with Multilevel Genome Typing, http://dx.doi.org/10.1101/2024.05.09.593273
,2024, DODGE: Automated point source bacterial outbreak detection using cumulative long term genomic surveillance, http://dx.doi.org/10.1101/2024.01.21.24301506
,2023, Genomic epidemiology and multilevel genome typing ofBordetella pertussis, http://dx.doi.org/10.1101/2023.04.26.538362
,2023, SaLTy: a novelStaphylococcus aureusLineage Typer, http://dx.doi.org/10.1101/2023.02.03.527095
,2022, Genomic epidemiology and multilevel genome typing of Australian Salmonella enterica serovar Enteritidis, http://dx.doi.org/10.1101/2022.05.18.492204
,2022, MGTdb: A web service and database for studying the global and local genomic epidemiology of bacterial pathogens, http://dx.doi.org/10.1101/2022.06.14.496187
,2020, Elucidation of global and local genomic epidemiology of Salmonella enterica serovar Enteritidis through multilevel genome typing, http://dx.doi.org/10.1101/2020.06.30.169953
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