By Professor Janaki Amin

Journal articles

Swart A; Meagher NS; van Leeuwen MT; Zhao K; Grulich A; Mao L; Randall DA; Degenhardt L; Burns L; O'Connell D; Amin J; Vajdic CM, 2015, 'Examining the quality of name code record linkage: what is the impact on death and cancer risk estimates? A validation study.', Australian and New Zealand journal of public health, 39, pp. 141 - 147, http://dx.doi.org/10.1111/1753-6405.12287

Larney S; Grebely J; Falster M; Swart A; Amin J; Degenhardt L; Burns L; Vajdic CM, 2015, 'Opioid substitution therapy is associated with increased detection of hepatitis C virus infection: A 15-year observational cohort study', Drug and Alcohol Dependence, 148, pp. 213 - 216, http://dx.doi.org/10.1016/j.drugalcdep.2014.12.027

Yuneti O; Sawitri A; Wulandari L; Muliawan P; Widyanthini D; Kathy P; Amin J; Mathers B; Kaldor J; Merati T; Wirawan D, 2015, 'P16.18 Influence of baseline characteristics on the increase cd4 >350 cells/mm3 among HIV/AIDS patients receiving antiretroviral therapy in indonesia', Sexually Transmitted Infections, 91, pp. a218.1 - a2a218, http://dx.doi.org/10.1136/sextrans-2015-052270.565

Hajarizadeh B; Grady B; Page K; Kim AY; McGovern BH; Cox AL; Rice TM; Sacks-Davis R; Bruneau J; Morris M; Amin J; Schinkel J; Applegate T; Maher L; Hellard M; Lloyd AR; Prins M; Geskus RB; Dore GJ; Grebely J; Lauer G; Shoukry NH; Hahn J; Shiboski S; Rice TM; Alavi M; Bouchard R; Aneja J; Teutsch S; White B; Wells B; Zang G; Matthews G; Marks P; Yeung B; Prince LE; Roy E; Bates A; Enriquez J; Chow S; McCredie L; Aitken C; Doyle J; Spelman T; Evans J, 2014, 'Interferon lambda 3 genotype predicts hepatitis C virus RNA levels in early acute infection among people who inject drugs: The InC3 Study', Journal of Clinical Virology, 61, pp. 430 - 434, http://dx.doi.org/10.1016/j.jcv.2014.08.027

Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR; Bretana N, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Hajarizadeh B; Grebely J; Applegate T; Matthews GV; Amin J; Petoumenos K; Hellard M; Rawlinson W; Lloyd A; Kaldor J; Dore GJ; Dolan K, 2014, 'Dynamics of HCV RNA Levels During Acute Hepatitis C Virus Infection', Journal of Medical Virology, 86, pp. 1722 - 1729, http://dx.doi.org/10.1002/jmv.24010

Haskelberg H; Mallon PWG; Hoy J; Amin J; Moore C; Phanuphak P; Ferret S; Belloso WH; Boyd MA; Cooper DA; Emery S; Cooper D, 2014, 'Bone mineral density over 96 weeks in adults failing first-line therapy randomised to raltegravir/lopinavir/ritonavir compared to standard second-line therapy', Journal of Acquired Immune Deficiency Syndromes, http://dx.doi.org/10.1097/QAI.0000000000000288

Muscatello DJ; Amin J; MacIntyre CR; Newall AT; Rawlinson WD; Sintchenko V; Gilmour R; Thackway S, 2014, 'Inaccurate ascertainment of morbidity and mortality due to influenza in administrative databases: A population-based record linkage study', Plos One, 9, pp. e98446, http://dx.doi.org/10.1371/journal.pone.0098446

Lee FJ; Amin J; Carr A, 2014, 'Efficacy of initial antiretroviral therapy for HIV-1 infection in adults: A systematic review and meta-analysis of 114 studies with up to 144 weeks' follow-up', Plos One, 9, http://dx.doi.org/10.1371/journal.pone.0097482

ENCORE1 Study Group , 2014, 'Efficacy of 400 mg efavirenz versus standard 600 mg dose in HIV-infected, antiretroviral-naive adults (ENCORE1): a randomised, double-blind, placebo-controlled, non-inferiority trial.', Lancet, 383, pp. 1474 - 1482, http://dx.doi.org/10.1016/S0140-6736(13)62187-X

Haskelberg H; Pocock N; Amin J; Ebeling PR; Emery S; Carr A; Post J; Medland N; Boyd M, 2014, 'Hip structural parameters over 96 weeks in HIV-infected adults switching treatment to tenofovir-emtricitabine or abacavir-lamivudine', Plos One, 9, pp. e94858, http://dx.doi.org/10.1371/journal.pone.0094858

Haskelberg H; Cordery DV; Amin J; Kelleher AD; Cooper DA; Emery S; Post J, 2014, 'HLA Alleles association with changes in bone mineral density in HIV-1-infected adults changing treatment to tenofovir-emtricitabine or abacavir-lamivudine', Plos One, 9, pp. e93333, http://dx.doi.org/10.1371/journal.pone.0093333

Haskelberg H; Mallon PWG; Hoy J; Amin J; Moore C; Phanuphak P; Ferret S; Belloso WH; Boyd MA; Cooper DA; Emery S, 2014, 'Bone mineral density over 96 weeks in adults failing first-line therapy randomized to raltegravir/lopinavir/ ritonavir compared with standard second-line therapy', Journal of Acquired Immune Deficiency Syndromes, 67, pp. 161 - 168, http://dx.doi.org/10.1097/QAI.0000000000000288

Amin J; Law MG; Puls R; Kelleher A; Cooper DA; Emery S; Han A, 2014, 'Comparison of central and local HIV-1 RNA quantification from two international clinical trials', AIDS, 28, pp. 2480 - 2483, http://dx.doi.org/10.1097/QAD.0000000000000461

Alavi M; Law MG; Grebely J; Thein HH; Walter S; Amin J; Dore GJ; Han A, 2014, 'Lower life expectancy among people with an HCV notification: A population-based linkage study', Journal of Viral Hepatitis, 21, pp. e10 - e18, http://dx.doi.org/10.1111/jvh.12245

Grebely J; Page K; Sacks-Davis R; van der Loeff MS; Rice TM; Bruneau J; Morris MD; Hajarizadeh B; Amin J; Cox AL; Kim AY; Mcgovern BH; Schinkel J; George J; Shoukry NH; Lauer GM; Maher L; Lloyd AR; Hellard M; Dore GJ; Prins M, 2014, 'The effects of female sex, viral genotype, and IL28B genotype on spontaneous clearance of acute hepatitis C virus infection', Hepatology, 59, pp. 109 - 120, http://dx.doi.org/10.1002/hep.26639

Moore CL; Amin J; Gidding HF; Law MG, 2014, 'A new method for assessing how sensitivity and specificity of linkage studies affects estimation.', PLoS One, 9, pp. e103690, http://dx.doi.org/10.1371/journal.pone.0103690

Luciani F; Bretaña NA; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR, 2014, 'A prospective study of hepatitisCincidence in Australian prisoners', Addiction, 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Phetsouphanh C; Xu Y; Amin J; Seddiki N; Procopio F; Sekaly RP; Zaunders JJ; Kelleher AD, 2013, 'Characterization of Transcription Factor Phenotypes within Antigen-Specific CD4+ T Cells Using Qualitative Multiplex Single-Cell RT-PCR', Plos One, 8, http://dx.doi.org/10.1371/journal.pone.0074946

Deans GD; Raffa JD; Lai C; Fischer B; Krajden M; Amin J; Walter SR; Dore GJ; Grebely J; Tyndall MW, 2013, 'Mortality in a large community-based cohort of inner-city residents in Vancouver, Canada', CMAJ Open, 1, pp. e68 - e76, http://dx.doi.org/10.9778/cmajo.20130002

Sidebottom AJ; Patel AA; Amin J, 2013, 'Botulinum injection for the management of myofascial pain in the masticatory muscles. A prospective outcome study', British Journal of Oral and Maxillofacial Surgery, 51, pp. 199 - 205, http://dx.doi.org/10.1016/j.bjoms.2012.07.002

Wildan T; Amin J; Bowe D; Gerber B; Saeed NR, 2013, 'Dental foundation year 2 training in oral and maxillofacial surgery units – the trainees’ perspective', British Journal of Oral and Maxillofacial Surgery, 51, pp. e155 - e164, http://dx.doi.org/10.1016/j.bjoms.2012.06.001

Rodger AJ; Lodwick RK; Schechter M; Deeks SG; Amin J; Gilson RJC; Paredes R; Bakowska E; Engsig FN; Phillips AN, 2013, 'Mortality in well controlled HIV in the continuous antiretroviral therapy arms of the SMART and ESPRIT trials compared with the general population', AIDS, 27, pp. 973 - 979, http://dx.doi.org/10.1097/QAD.0b013e32835cae9c

Matthews GV; Ali RJ; Avihingsanon A; Amin J; Hammond RA; Bowden S; Lewin SR; Sasadeusz JJ; Littlejohn M; Locarnini SL; Ruxrungtham K; Dore GJ, 2013, 'Quantitative HBsAg and HBeAg Predict Hepatitis B Seroconversion after Initiation of HAART in HIV-HBV Coinfected Individuals', PLoS One, 8, pp. e61297, http://dx.doi.org/10.1371/journal.pone.0061297

Leenders FJ; Amin J; Bloch M; Pett SL; Marriott D; Carr AD, 2013, 'Skeletal muscle toxicity associated with raltegravir-based combination antiretroviral therapy in HIV-infected adults', JAIDS: Journal of Acquired Immune Deficiency Syndromes, 62, pp. 525 - 533, http://dx.doi.org/10.1097/QAI.0b013e3182832578

Mccredie L; Luciani F; Teutsch S; Amin J; Topp L; Dolan K; Lloyd A, 2012, 'BLOODY PRISONS: INCIDENCE OF RISK BEHAVIOURS AND HEPATITIS C VIRUS TRANSMISSION IN AN AUSTRALIAN PRISONER COHORT', DRUG AND ALCOHOL REVIEW, 31, pp. 57 - 57, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000311236700175&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Achhra AC; Amin J; Sabin C; Chu H; Dunn D; Kuller LH; Kovacs JA; Cooper DA; Emery S; Law MG, 2012, 'Reclassification of risk of death with the knowledge of D-dimer in a cohort of treated HIV-infected individuals', AIDS, 26, pp. 1707 - 1717, http://dx.doi.org/10.1097/QAD.0b013e328355d659

Brown DA; Hance KW; Rogers CJ; Sansbury LB; Albert PS; Murphy G; Laiyemo AO; Wang Z; Cross AJ; Schatzkin A; Danta M; Srasuebkul P; Amin J; Law M; Breit SN; Lanza E, 2012, 'Serum Macrophage Inhibitory Cytokine-1 (MIC-1/GDF15): A Potential Screening Tool for the Prevention of Colon Cancer?', Cancer Epidemiology, Biomarkers & Prevention, 21, pp. 337 - 346, http://dx.doi.org/10.1158/1055-9965.epi-11-0786

Hsu DC; Zaunders J; Plit ML; Leeman C; Ip S; Iampornsin T; Pett SL; Bailey MR; Amin J; Ubolyam S; Avihingsanon A; Ananworanich J; Ruxrungtham K; Cooper DA; Kelleher AD, 2012, 'A novel assay detecting recall response to Mycobacterium tuberculosis: Comparison with existing assays', Tuberculosis, 92, pp. 321 - 327, http://dx.doi.org/10.1016/j.tube.2012.03.008

Haskelberg H; Hoy J; Amin J; Ebeling PR; Emery S; Carr AD, 2012, 'Changes in Bone Turnover and Bone Loss in HIV-Infected Patients Changing Treatment to Tenofovir-Emtricitabine or Abacavir-Lamivudine', PLoS ONE, 7, pp. e38377, http://dx.doi.org/10.1371/journal.pone.0038377

Alavi M; Grebely J; Matthews GV; Petoumenos K; Yeung B; Day C; Lloyd AR; Van Beek I; Kaldor JM; Hellard M; Dore GJ; Haber PS; ATAHC Study Group , 2012, 'Effect of pegylated interferon-α-2a treatment on mental health during recent hepatitis C virus infection.', J Gastroenterol Hepatol, 27, pp. 957 - 965, http://dx.doi.org/10.1111/j.1440-1746.2011.07035.x

Gidding HF; Law MG; Amin J; Ostapowicz G; Weltman M; Macdonald GA; Sasadeusz JJ; Haber PAW; George J; Dore GJ, 2012, 'Hepatitis C treatment outcomes in Australian clinics', Medical Journal of Australia, 196, pp. 633 - 637, http://dx.doi.org/10.5694/mja12.10014

Achhra AC; Amin J, 2012, 'Race and CD4 + T-cell count in HIV prognosis and treatment', Future Virology, 7, pp. 193 - 203, http://dx.doi.org/10.2217/fvl.11.143

Wren LH; Chung AW; Isitman G; Kelleher AD; Parsons MS; Amin J; Cooper DA; Stratov SI; Navis M; Kent SJ, 2012, 'Specific antibody-dependent cellular cytotoxicity responses associated with slow progression of HIV infection', Immunology, 138, pp. 116 - 123, http://dx.doi.org/10.1111/imm.12016

Thein H; Walter SR; Gidding HF; Amin J; Law MG; George J; Dore GJ, 2012, 'Survival after diagnosis of hepatocellular carcinoma and potential impact of treatment in a hepatitis B or C infected cohort', Hepatology Research, 42, pp. 1175 - 1186, http://dx.doi.org/10.1111/j.1872-034x.2012.01037.x

Cordery D; Martin A; Kelleher AD; Emery S; Cooper DA, 2012, 'The influence of HLA supertype on thymidine analogue associated with low peripheral fat in HIV.', AIDS, 26, pp. 2337 - 2344, http://dx.doi.org/10.1097/QAD.0b013e32835ab213

Byakwaga H; Kelly M; Purcell DFJ; French MA; Amin J; Lewin SR; Haskelberg H; Kelleher AD; Garsia R; Boyd MA; Cooper DA; Emery S, 2011, 'Intensification of Antiretroviral Therapy With Raltegravir or Addition of Hyperimmune Bovine Colostrum in HIV-Infected Patients With Suboptimal CD4⁺ T-Cell Response: A Randomized Controlled Trial', JOURNAL OF INFECTIOUS DISEASES, 204, pp. 1532 - 1540, http://dx.doi.org/10.1093/infdis/jir559

Kumarasinghe G; Herrera C; Stuart S; Victor A; Amin J; Hayward C; MacDonald P; Danta M, 2011, 'Noninvasive assessment of liver fibrosis in cardiac disease', JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 26, pp. 54 - 54, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=000295157300141&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Gidding HF; Law MG; Amin J; Macdonald GA; Sasadeusz JJ; Jones TL; Strasser SI; George J; Dore GJ; ACHOS investigator team , 2011, 'Predictors of deferral of treatment for hepatitis C infection in Australian clinics.', Med J Aust, 194, pp. 398 - 402, http://dx.doi.org/10.5694/j.1326-5377.2011.tb03029.x

Haskelberg H; Hoy J; Amin J; Ebeling PR; Emery S; Carr A, 2011, 'Lower fat mass and lower bone formation predict greater bone loss with tenofovir in HIV-infected adults', ANTIVIRAL THERAPY, 16, pp. A6 - A7, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000294375900007&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Cordery DV; Humphries A; Amin J; Kelleher AD; Emery S; Cooper DA, 2011, 'The influence of HLA supertype on thymidine analogue induced body composition changes in STEAL', ANTIVIRAL THERAPY, 16, pp. A20 - A21, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000294375900025&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Chung AW; Navis M; Isitman G; Wren L; Silvers J; Amin J; Kent SJ; Stratov I, 2011, 'Activation of NK cells by ADCC antibodies and HIV disease progression', JAIDS: Journal of Acquired Immune Deficiency Syndromes, 58, pp. 127 - 131, http://dx.doi.org/10.1097/QAI.0b013e31822c62b9

Kariminia A; Chokephaibulkit K; Pang J; Lumbiganond P; Hansudewechakul R; Amin J; Kumarasamy N; Puthanakit T; Kurniati N; Yusoff N; Saphonn V; Fong SM; Razali K; Nallusamy R; Sohn A; Sirisanthana V, 2011, 'Cohort profile: The TREAT Asia pediatric HIV observational database', International Journal of Epidemiology, 40, pp. 15 - 24, http://dx.doi.org/10.1093/ije/dyp358

GIDDING HF; AMIN J; DORE GJ; LAW MG, 2011, 'Hospitalization rates associated with hepatitis B and HIV co-infection, age and sex in a population-based cohort of people diagnosed with hepatitis C', Epidemiology and Infection, 139, pp. 1151 - 1158, http://dx.doi.org/10.1017/s095026881000258x

Achhra A; Phanuphak P; Amin J, 2011, 'Long-term immunological outcomes in treated HIV-infected individuals in high-income and low-middle income countries', Current opinion in HIV & AIDS, 6, pp. 258 - 265, http://dx.doi.org/10.1097/COH.0b013e3283476c72

Jackson A; Hill A; Puls R; Else L; Amin J; Back D; Lin E; Khoo S; Emery S; Morley R; Gazzard B; Boffito M, 2011, 'Pharmacokinetics of plasma lopinavir/ritonavir following the administration of 400/100 mg, 200/150 mg and 200/50 mg twice daily in HIV-negative volunteers', Journal of Antimicrobial Chemotherapy, 66, pp. 635 - 640, http://dx.doi.org/10.1093/jac/dkq468

Martin A; Amin J; Emery S; Baker D; Carr AD; Cooper DA; Bloch M, 2011, 'Predictors of limb fat gain in HIV positive patients following a change to tenofovir-emtricitabine or Abacavir-Lamivudine', PLoS One, 6, pp. Article number e26885, http://dx.doi.org/10.1371/journal.pone.0026885

Wildan T; Amin J; Saeed N, 2011, 'Relevance of Dental Foundation Year 2 training in maxillofacial units', British Journal of Oral and Maxillofacial Surgery, 49, pp. s25, http://dx.doi.org/10.1016/j.bjoms.2011.04.065

Walter SR; Thein H; Gidding HF; Amin J; Law MG; George J; Dore GJ, 2011, 'Risk factors for hepatocellular carcinoma in a cohort infected with hepatitis B or C', Journal of Gastroenterology and Hepatology, 26, pp. 1757 - 1764, http://dx.doi.org/10.1111/j.1440-1746.2011.06785.x

Achhra AC; Zhou J; Choi JY; Hoy J; Zhang F; Templeton DJ; Merati T; Woolley I; Petoumenos K; Amin J; TAHOD and AHOD , 2011, 'The Clinical Significance of CD4 Counts in Asian and Caucasian HIV-Infected Populations: Results from TAHOD and AHOD.', J Int Assoc Physicians AIDS Care (Chic), 10, pp. 160 - 170, http://dx.doi.org/10.1177/1545109711402213

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