By Professor Joseph Powell

Journal articles

Holton E; Muskovic W; Powell JE, 2024, 'Deciphering cancer cell state plasticity with single-cell genomics and artificial intelligence', Genome Medicine, 16, http://dx.doi.org/10.1186/s13073-024-01309-4

Neavin D; Senabouth A; Arora H; Lee JTH; Ripoll-Cladellas A; Franke L; Prabhakar S; Ye CJ; McCarthy DJ; Melé M; Hemberg M; Powell JE, 2024, 'Demuxafy: improvement in droplet assignment by integrating multiple single-cell demultiplexing and doublet detection methods', Genome Biology, 25, http://dx.doi.org/10.1186/s13059-024-03224-8

Zaman A; Muskovic W; Holton E; Pandya M; Zakanovic R; Chin V; Lam E; Yeung J; Sughrue M; Teo C; Powell J, 2024, 'KS01.5.A A BRAIN CANCER CELL ATLAS REVEALS SHARED ASTROCYTE-LIKE STEM CELL STATES DRIVE INTRATUMOURAL HETEROGENEITY AND SHAPE IMMUNE DYNAMICS IN ADULT-TYPE DIFFUSE GLIOMAS', Neuro-Oncology, 26, pp. v3 - v3, http://dx.doi.org/10.1093/neuonc/noae144.007

Cartland SP; Patil MS; Kelland E; Le N; Boccanfuso L; Stanley CP; Cholan PM; Dona MI; Patrick R; McGrath J; Su QP; Alwis I; Ganss R; Powell JE; Harvey RP; Pinto AR; Griffith TS; Loa J; Aitken SJ; Robinson DA; Patel S; Kavurma MM, 2024, 'The generation of stable microvessels in ischemia is mediated by endothelial cell derived TRAIL', Science Advances, 10, http://dx.doi.org/10.1126/sciadv.adn8760

Greatbatch CJ; Lu Q; Hung S; Tran SN; Wing K; Liang H; Han X; Zhou T; Siggs OM; Mackey DA; Liu GS; Cook AL; Powell JE; Craig JE; MacGregor S; Hewitt AW, 2024, 'Deep Learning-Based Identification of Intraocular Pressure-Associated Genes Influencing Trabecular Meshwork Cell Morphology', Ophthalmology Science, 4, http://dx.doi.org/10.1016/j.xops.2024.100504

Chauquet S; Willis EF; Grice L; Harley SBR; Powell JE; Wray NR; Nguyen Q; Ruitenberg MJ; Shah S; Vukovic J, 2024, 'Exercise rejuvenates microglia and reverses T cell accumulation in the aged female mouse brain', Aging Cell, 23, http://dx.doi.org/10.1111/acel.14172

Lim JWY; Chin VT; Keith P; McCloy R; Neavin D; Xue A; Kaczorowski D; Spenceley E; Arora H; Joshua AM; Powell J, 2024, 'Predicting immunotherapy toxicity through single-cell sequencing of peripheral immune cells: A pilot study.', Journal of Clinical Oncology, 42, pp. e14538 - e14538, http://dx.doi.org/10.1200/jco.2024.42.16_suppl.e14538

Greatbatch CJ; Lu Q; Hung S; Barnett AJ; Wing K; Liang H; Han X; Zhou T; Siggs OM; Mackey DA; Cook AL; Senabouth A; Liu GS; Craig JE; MacGregor S; Powell JE; Hewitt AW, 2024, 'High throughput functional profiling of genes at intraocular pressure loci reveals distinct networks for glaucoma', Human Molecular Genetics, 33, pp. 739 - 751, http://dx.doi.org/10.1093/hmg/ddae003

Farbehi N; Neavin DR; Cuomo ASE; Studer L; MacArthur DG; Powell JE, 2024, 'Integrating population genetics, stem cell biology and cellular genomics to study complex human diseases', Nature Genetics, 56, pp. 758 - 766, http://dx.doi.org/10.1038/s41588-024-01731-9

Rumker L; Sakaue S; Reshef Y; Kang JB; Yazar S; Alquicira-Hernandez J; Valencia C; Lagattuta KA; Mah-Som A; Nathan A; Powell JE; Loh PR; Raychaudhuri S, 2024, 'Identifying genetic variants that influence the abundance of cell states in single-cell data', Nature Genetics, http://dx.doi.org/10.1038/s41588-024-01909-1

Wang Q; Wang M; Choi I; Sarrafha L; Liang M; Ho L; Farrell K; Beaumont KG; Sebra R; De Sanctis C; Crary JF; Ahfeldt T; Blanchard J; Neavin D; Powell J; Davis DA; Sun X; Zhang B; Yue Z, 2024, 'Molecular profiling of human substantia nigra identifies diverse neuron types associated with vulnerability in Parkinson’s disease', Science Advances, 10, http://dx.doi.org/10.1126/sciadv.adi8287

Zhou Z; Du J; Wang J; Liu L; Gordon MG; Ye CJ; Powell JE; Li MJ; Rao S, 2024, 'SingleQ: a comprehensive database of single-cell expression quantitative trait loci (sc-eQTLs) cross human tissues', Database, 2024, http://dx.doi.org/10.1093/database/baae010

Chin V; McCloy RA; Sennabouth A; Neavin D; Arora H; Boyer M; Simes J; Joshua A; Brown B; Powell J, 2024, 'P1.03D.09 Single Cell RNA Sequencing and Functional Monocyte Stimulation Reveals Phenotypic Predispositions to Developing Lung Cancer in Never Smokers', Journal of Thoracic Oncology, 19, pp. S155 - S156, http://dx.doi.org/10.1016/j.jtho.2024.09.281

Neavin DR; Steinmann AM; Farbehi N; Chiu HS; Daniszewski MS; Arora H; Bermudez Y; Moutinho C; Chan CL; Bax M; Tyebally M; Gnanasambandapillai V; Lam CE; Nguyen U; Hernández D; Lidgerwood GE; Graham RM; Hewitt AW; Pébay A; Palpant NJ; Powell JE, 2023, 'A village in a dish model system for population-scale hiPSC studies', Nature Communications, 14, http://dx.doi.org/10.1038/s41467-023-38704-1

Kang JB; Shen AZ; Gurajala S; Nathan A; Rumker L; Aguiar VRC; Valencia C; Lagattuta KA; Zhang F; Jonsson AH; Yazar S; Alquicira-Hernandez J; Khalili H; Ananthakrishnan AN; Jagadeesh K; Dey K; Albrecht J; Apruzzese W; Banda N; Barnas JL; Bathon JM; Ben-Artzi A; Boyce BF; Boyle DL; Bridges SL; Bykerk VP; Campbell D; Carr HL; Ceponis A; Chicoine A; Cordle A; Curtis M; Deane KD; DiCarlo E; Dunn P; Filer A; Firestein GS; Forbess L; Geraldino-Pardilla L; Goodman SM; Gravallese EM; Gregersen PK; Guthridge JM; Holers VM; Horowitz D; Hughes LB; Ishigaki K; Ivashkiv LB; James JA; Keras G; Korsunsky I; Lakhanpal A; Lederer JA; Lewis M; Li ZJ; Li Y; Liao KP; Mandelin AM; Mantel I; Marks KE; Maybury M; McDavid A; McGeachy MJ; Mears J; Meednu N; Millard N; Moreland LW; Nayar S; Nerviani A; Orange DE; Perlman H; Pitzalis C; Rangel-Moreno J; Raza K; Reshef Y; Ritchlin C; Rivellese F; Robinson WH; Sahbudin I; Singaraju A; Seifert JA; Slowikowski K; Smith MH; Tabechian D; Scheel-Toellner D; Utz PJ; Watts GFM; Wei K; Weinand K; Weisenfeld D; Weisman MH; Wyse A; Xiao Q; Zhu Z; Daly MJ; Xavier RJ; Donlin LT; Anolik JH; Powell JE; Rao DA, 2023, 'Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution', Nature Genetics, 55, pp. 2255 - 2268, http://dx.doi.org/10.1038/s41588-023-01586-6

Dai Q; Zhou G; Zhao H; Võsa U; Franke L; Battle A; Teumer A; Lehtimäki T; Raitakari OT; Esko T; Agbessi M; Ahsan H; Alves I; Andiappan AK; Arindrarto W; Awadalla P; Beutner F; Jan Bonder M; Boomsma DI; Christiansen MW; Claringbould A; Deelen P; Favé MJ; Frayling T; Gharib SA; Gibson G; Heijmans BT; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg J; Kukushkina V; Kutalik Z; Lee B; Loeffler M; Marigorta UM; Mei H; Milani L; Montgomery GW; Müller-Nurasyid M; Nauck M; Nivard MG; Penninx B; Perola M; Pervjakova N; Pierce BL; Powell J; Prokisch H; Psaty BM; Ripatti S; Rotzschke O; Rüeger S; Saha A; Scholz M; Schramm K; Seppälä I; Slagboom EP; Stehouwer CDA; Stumvoll M; Sullivan P; ‘t Hoen PAC; Thiery J; Tong L; Tönjes A; van Dongen J; van Iterson M; van Meurs J; Veldink JH; Verlouw J; Visscher PM; Völker U; Westra HJ; Wijmenga C; Yaghootka H; Yang J; Zeng B; Zhang F; Epstein MP; Yang J, 2023, 'OTTERS: a powerful TWAS framework leveraging summary-level reference data', Nature Communications, 14, http://dx.doi.org/10.1038/s41467-023-36862-w

Xue A; Yazar S; Neavin D; Powell JE, 2023, 'Pitfalls and opportunities for applying latent variables in single-cell eQTL analyses', Genome Biology, 24, http://dx.doi.org/10.1186/s13059-023-02873-5

Sarrafha L; Neavin DR; Parfitt GM; Kruglikov IA; Whitney K; Reyes R; Coccia E; Kareva T; Goldman C; Tipon R; Croft G; Crary JF; Powell JE; Blanchard J; Ahfeldt T, 2023, 'Novel human pluripotent stem cell-derived hypothalamus organoids demonstrate cellular diversity', iScience, 26, http://dx.doi.org/10.1016/j.isci.2023.107525

Cuomo ASE; Nathan A; Raychaudhuri S; MacArthur DG; Powell JE, 2023, 'Single-cell genomics meets human genetics', Nature Reviews Genetics, 24, pp. 535 - 549, http://dx.doi.org/10.1038/s41576-023-00599-5

Lim J; Chin V; Fairfax K; Moutinho C; Suan D; Ji H; Powell JE, 2023, 'Transitioning single-cell genomics into the clinic', Nature Reviews Genetics, 24, pp. 573 - 584, http://dx.doi.org/10.1038/s41576-023-00613-w

Sikkema L; Ramírez-Suástegui C; Strobl DC; Gillett TE; Zappia L; Madissoon E; Markov NS; Zaragosi LE; Ji Y; Ansari M; Arguel MJ; Apperloo L; Banchero M; Bécavin C; Berg M; Chichelnitskiy E; Chung MI; Collin A; Gay ACA; Gote-Schniering J; Hooshiar Kashani B; Inecik K; Jain M; Kapellos TS; Kole TM; Leroy S; Mayr CH; Oliver AJ; von Papen M; Peter L; Taylor CJ; Walzthoeni T; Xu C; Bui LT; De Donno C; Dony L; Faiz A; Guo M; Gutierrez AJ; Heumos L; Huang N; Ibarra IL; Jackson ND; Kadur Lakshminarasimha Murthy P; Lotfollahi M; Tabib T; Talavera-López C; Travaglini KJ; Wilbrey-Clark A; Worlock KB; Yoshida M; Chen Y; Hagood JS; Agami A; Horvath P; Lundeberg J; Marquette CH; Pryhuber G; Samakovlis C; Sun X; Ware LB; Zhang K; van den Berge M; Bossé Y; Desai TJ; Eickelberg O; Kaminski N; Krasnow MA; Lafyatis R; Nikolic MZ; Powell JE; Rajagopal J; Rojas M; Rozenblatt-Rosen O; Seibold MA; Sheppard D; Shepherd DP; Sin DD; Timens W; Tsankov AM; Whitsett J; Xu Y; Banovich NE; Barbry P; Duong TE; Falk CS; Meyer KB; Kropski JA; Pe’er D; Schiller HB; Tata PR; Schultze JL; Teichmann SA; Misharin AV; Nawijn MC; Luecken MD; Theis FJ, 2023, 'An integrated cell atlas of the lung in health and disease', Nature Medicine, 29, pp. 1563 - 1577, http://dx.doi.org/10.1038/s41591-023-02327-2

Grimm L; Mason E; Yu H; Dudczig S; Panara V; Chen T; Bower NI; Paterson S; Rondon Galeano M; Kobayashi S; Senabouth A; Lagendijk AK; Powell J; Smith KA; Okuda KS; Koltowska K; Hogan BM, 2023, 'Single-cell analysis of lymphatic endothelial cell fate specification and differentiation during zebrafish development', EMBO Journal, 42, http://dx.doi.org/10.15252/embj.2022112590

Ballinger ML; Pattnaik S; Mundra PA; Zaheed M; Rath E; Priestley P; Baber J; Ray-Coquard I; Isambert N; Causeret S; van der Graaf WTA; Puri A; Duffaud F; Le Cesne A; Seddon B; Chandrasekar C; Schiffman JD; Brohl AS; James PA; Kurtz JE; Penel N; Myklebost O; Meza-Zepeda LA; Pickett H; Kansara M; Waddell N; Kondrashova O; Pearson JV; Barbour AP; Li S; Nguyen TL; Fatkin D; Graham RM; Giannoulatou E; Green MJ; Kaplan W; Ravishankar S; Copty J; Powell JE; Cuppen E; van Eijk K; Veldink J; Ahn JH; Kim JE; Lor Randall R; Tucker K; Judson I; Sarin R; Ludwig T; Genin E; Deleuze JF; Haber M; Marshall G; Cairns MJ; Blay JY; Thomas DM, 2023, 'Heritable defects in telomere and mitotic function selectively predispose to sarcomas', Science, 379, pp. 253 - 260, http://dx.doi.org/10.1126/science.abj4784

Brown M; Greenwood E; Gibson G, 2023, 'Effect of all-but-one conditional analysis for eQTL isolation in peripheral blood', Genetics, 223, http://dx.doi.org/10.1093/genetics/iyac162

Khoo WH; Jackson K; Phetsouphanh C; Zaunders JJ; Alquicira-Hernandez J; Yazar S; Ruiz-Diaz S; Singh M; Dhenni R; Kyaw W; Tea F; Merheb V; Lee FXZ; Burrell R; Howard-Jones A; Koirala A; Zhou L; Yuksel A; Catchpoole DR; Lai CL; Vitagliano TL; Rouet R; Christ D; Tang B; West NP; George S; Gerrard J; Croucher PI; Kelleher AD; Goodnow CG; Sprent JD; Powell JE; Brilot F; Nanan R; Hsu PS; Deenick EK; Britton PN; Phan TG, 2023, 'Tracking the clonal dynamics of SARS-CoV-2-specific T cells in children and adults with mild/asymptomatic COVID-19', Clinical Immunology, 246, http://dx.doi.org/10.1016/j.clim.2022.109209

Tyebally R; Xue A; Powell JE, 2023, 'The potential clinical impact of cell type-specific genetic regulation: Crohn's disease.', Clin Transl Med, 13, pp. e1474, http://dx.doi.org/10.1002/ctm2.1474

Wilson SB; Howden SE; Vanslambrouck JM; Dorison A; Alquicira-Hernandez J; Powell JE; Little MH, 2022, 'DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets', Genome Medicine, 14, http://dx.doi.org/10.1186/s13073-022-01023-z

Senabouth A; Daniszewski M; Lidgerwood GE; Liang HH; Hernández D; Mirzaei M; Keenan SN; Zhang R; Han X; Neavin D; Rooney L; Lopez Sanchez MIG; Gulluyan L; Paulo JA; Clarke L; Kearns LS; Gnanasambandapillai V; Chan CL; Nguyen U; Steinmann AM; McCloy RA; Farbehi N; Gupta VK; Mackey DA; Bylsma G; Verma N; MacGregor S; Watt MJ; Guymer RH; Powell JE; Hewitt AW; Pébay A, 2022, 'Transcriptomic and proteomic retinal pigment epithelium signatures of age-related macular degeneration', Nature Communications, 13, http://dx.doi.org/10.1038/s41467-022-31707-4

Phipson B; Sim CB; Porrello ER; Hewitt AW; Powell J; Oshlack A, 2022, 'propeller: testing for differences in cell type proportions in single cell data', Bioinformatics, 38, pp. 4720 - 4726, http://dx.doi.org/10.1093/bioinformatics/btac582

Yazar S; Powell JE, 2022, 'Single-cell expression Quantitative Trait Loci: T-cell immunology teams up with statistical genetics', Immunology and Cell Biology, 100, pp. 588 - 590, http://dx.doi.org/10.1111/imcb.12577

Patel B; Kleeman SO; Neavin D; Powell J; Baskozos G; Ng M; Ahmed WUR; Bennett DL; Schmid AB; Furniss D; Wiberg A, 2022, 'Shared genetic susceptibility between trigger finger and carpal tunnel syndrome: a genome-wide association study', The Lancet Rheumatology, 4, pp. e556 - e565, http://dx.doi.org/10.1016/S2665-9913(22)00180-1

Daniszewski M; Senabouth A; Liang HH; Han X; Lidgerwood GE; Hernández D; Sivakumaran P; Clarke JE; Lim SY; Lees JG; Rooney L; Gulluyan L; Souzeau E; Graham SL; Chan CL; Nguyen U; Farbehi N; Gnanasambandapillai V; McCloy RA; Clarke L; Kearns LS; Mackey DA; Craig JE; MacGregor S; Powell JE; Pébay A; Hewitt AW, 2022, 'Retinal ganglion cell-specific genetic regulation in primary open-angle glaucoma', Cell Genomics, 2, http://dx.doi.org/10.1016/j.xgen.2022.100142

Yazar S; Alquicira-Hernandez J; Wing K; Senabouth A; Gordon MG; Andersen S; Lu Q; Rowson A; Taylor TRP; Clarke L; Maccora K; Chen C; Cook AL; Ye CJ; Fairfax KA; Hewitt AW; Powell JE, 2022, 'Single-cell eQTL mapping identifies cell type-specific genetic control of autoimmune disease', Science, 376, http://dx.doi.org/10.1126/science.abf3041

Zammit NW; McDowell J; Warren J; Muskovic W; Gamble J; Shi YC; Kaczorowski D; Chan CL; Powell J; Ormandy C; Brown D; Oakes SR; Grey ST, 2022, 'TNFAIP3 Reduction-of-Function Drives Female Infertility and CNS Inflammation', Frontiers in Immunology, 13, http://dx.doi.org/10.3389/fimmu.2022.811525

Talenti A; Powell J; Hemmink JD; Cook EAJ; Wragg D; Jayaraman S; Paxton E; Ezeasor C; Obishakin ET; Agusi ER; Tijjani A; Amanyire W; Muhanguzi D; Marshall K; Fisch A; Ferreira BR; Qasim A; Chaudhry U; Wiener P; Toye P; Morrison LJ; Connelley T; Prendergast JGD, 2022, 'A cattle graph genome incorporating global breed diversity.', Nat Commun, 13, pp. 910, http://dx.doi.org/10.1038/s41467-022-28605-0

Chin V; Arora H; Senabouth A; Hernandez JA; McCloy R; Simes J; Boyer M; Hogg P; Young J; Joshua A; Brown B; Watkins N; Powell J, 2022, 'EP16.03-041 Single Cell RNA Sequencing Reveals Phenotypic Predispositions to Developing Lung Cancer in Never-Smokers', Journal of Thoracic Oncology, 17, pp. S608 - S608, http://dx.doi.org/10.1016/j.jtho.2022.07.1102

Bui LT; Winters NI; Chung MI; Joseph C; Gutierrez AJ; Habermann AC; Adams TS; Schupp JC; Poli S; Peter LM; Taylor CJ; Blackburn JB; Richmond BW; Nicholson AG; Rassl D; Wallace WA; Rosas IO; Jenkins RG; Kaminski N; Kropski JA; Banovich NE; Misharin AV; Tsankov AM; Spira A; Barbry P; Brazma A; Samakovlis C; Shepherd DP; Rawlins EL; Theis FJ; Griffonnet J; Lee H; Schiller HB; Hofman P; Powell JE; Schultze JL; Whitsett J; Choi J; Lundeberg J; Ordovas-Montanes J; Rajagopal J; Meyer KB; Krasnow MA; Saeb‐Parsy K; Zhang K; Lafyatis R; Leroy S; Haniffa M; Nawijn MC; Nikolić MZ; van den Berge M; Kuhnemund M; Marquette CH; Von Papen M; Eickelberg O; Rosenblatt-Rosen O; Reyfman PA; Pe’er D; Horvath P; Tata PR; Regev A; Rojas M; Seibold MA; Shalek AK; Spence JR; Teichmann SA; Quake S; Duong TE; Biancalani T; Desai T; Sun X; Zaragosi LE, 2021, 'Chronic lung diseases are associated with gene expression programs favoring SARS-CoV-2 entry and severity', Nature Communications, 12, http://dx.doi.org/10.1038/s41467-021-24467-0

Wu SZ; Roden DL; Al-Eryani G; Bartonicek N; Harvey K; Cazet AS; Chan CL; Junankar S; Hui MN; Millar EA; Beretov J; Horvath L; Joshua AM; Stricker P; Wilmott JS; Quek C; Long GV; Scolyer RA; Yeung BZ; Segara D; Mak C; Warrier S; Powell JE; O’Toole S; Lim E; Swarbrick A, 2021, 'Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis', Genome Medicine, 13, http://dx.doi.org/10.1186/s13073-021-00885-z

Muskovic W; Powell JE, 2021, 'DropletQC: improved identification of empty droplets and damaged cells in single-cell RNA-seq data', Genome Biology, 22, http://dx.doi.org/10.1186/s13059-021-02547-0

Mills MC; Tropf FC; Brazel DM; van Zuydam N; Vaez A; Agbessi M; Ahsan H; Alves I; Andiappan AK; Arindrarto W; Awadalla P; Battle A; Beutner F; Jan Bonder M; Boomsma DI; Christiansen MW; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib SA; Gibson G; Heijmans BT; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg J; Kukushkina V; Kutalik Z; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Mei H; Milani L; Montgomery GW; Müller-Nurasyid M; Nauck M; Nivard MG; Penninx BWJH; Perola M; Pervjakova N; Pierce BL; Powell J; Prokisch H; Psaty BM; Raitakari OT; Ripatti S; Rotzschke O; Rüeger S; Saha A; Scholz M; Schramm K; Seppälä I; Slagboom EP; Stehouwer CDA; Stumvoll M; Sullivan P; ‘t Hoen PAC; Teumer A; Thiery J; Tong L; Tönjes A; van Dongen J; van Iterson M; van Meurs J; Veldink JH; Verlouw J; Visscher PM; Völker U; Võsa U; Westra HJ; Wijmenga C; Yaghootkar H; Yang J; Zeng B; Zhang F; Akimova ET; Bergmann S; Boardman JD; Brumat M; Franke L; Cesarini D; Chasman DI; Chavarro JE; Cocca M; Concas MP; Davey-Smith G; Davies G; Deary IJ, 2021, 'Identification of 371 genetic variants for age at first sex and birth linked to externalising behaviour', Nature Human Behaviour, 5, pp. 1717 - 1730, http://dx.doi.org/10.1038/s41562-021-01135-3

Shen S; Sun Y; Matsumoto M; Shim WJ; Sinniah E; Wilson SB; Werner T; Wu Z; Bradford ST; Hudson J; Little MH; Powell J; Nguyen Q; Palpant NJ, 2021, 'Integrating single-cell genomics pipelines to discover mechanisms of stem cell differentiation', Trends in Molecular Medicine, 27, pp. 1135 - 1158, http://dx.doi.org/10.1016/j.molmed.2021.09.006

Neavin D; Nguyen Q; Daniszewski MS; Liang HH; Chiu HS; Wee YK; Senabouth A; Lukowski SW; Crombie DE; Lidgerwood GE; Hernández D; Vickers JC; Cook AL; Palpant NJ; Pébay A; Hewitt AW; Powell JE, 2021, 'Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells', Genome Biology, 22, http://dx.doi.org/10.1186/s13059-021-02293-3

Tuong ZK; Lukowski SW; Nguyen QH; Chandra J; Zhou C; Gillinder K; Bashaw AA; Ferdinand JR; Stewart BJ; Teoh SM; Hanson SJ; Devitt K; Clatworthy MR; Powell JE; Frazer IH, 2021, 'A model of impaired Langerhans cell maturation associated with HPV induced epithelial hyperplasia', iScience, 24, http://dx.doi.org/10.1016/j.isci.2021.103326

Currant H; Hysi P; Fitzgerald TW; Gharahkhani P; Bonnemaijer PWM; Senabouth A; Hewitt AW; Atan D; Aung T; Charng J; Choquet H; Craig J; Khaw PT; Klaver CCW; Kubo M; Ong JS; Pasquale LR; Reisman CA; Daniszewski M; Powell JE; Pébay A; Simcoe MJ; Thiadens AAHJ; van Duijn CM; Yazar S; Jorgenson E; MacGregor S; Hammond CJ; Mackey DA; Wiggs JL; Foster PJ; Patel PJ; Birney E; Khawaja AP, 2021, 'Erratum: Genetic variation affects morphological retinal phenotypes extracted from UK Biobank optical coherence tomography images (PLoS Genet (2021) 17:5 (e1009497) DOI: 10.1371/journal.pgen.1009497)', PLoS Genetics, 17, http://dx.doi.org/10.1371/journal.pgen.1009858

Nieto P; Elosua-Bayes M; Trincado JL; Marchese D; Massoni-Badosa R; Salvany M; Henriques A; Nieto J; Aguilar-Fernández S; Mereu E; Moutinho C; Ruiz S; Lorden P; Chin VT; Kaczorowski D; Chan CL; Gallagher R; Chou A; Planas-Rigol E; Rubio-Perez C; Gut I; Piulats JM; Seoane J; Powell JE; Batlle E; Heyn H, 2021, 'A single-cell tumor immune atlas for precision oncology', Genome Research, 31, pp. 1913 - 1926, http://dx.doi.org/10.1101/gr.273300.120

Du Q; Smith GC; Luu PL; Ferguson JM; Armstrong NJ; Caldon CE; Campbell EM; Nair SS; Zotenko E; Gould CM; Buckley M; Chia KM; Portman N; Lim E; Kaczorowski D; Chan CL; Barton K; Deveson IW; Smith MA; Powell JE; Skvortsova K; Stirzaker C; Achinger-Kawecka J; Clark SJ, 2021, 'DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity', Cell Reports, 36, http://dx.doi.org/10.1016/j.celrep.2021.109722

Wu SZ; Al-Eryani G; Roden DL; Junankar S; Harvey K; Andersson A; Thennavan A; Wang C; Torpy JR; Bartonicek N; Wang T; Larsson L; Kaczorowski D; Weisenfeld NI; Uytingco CR; Chew JG; Bent ZW; Chan CL; Gnanasambandapillai V; Dutertre CA; Gluch L; Hui MN; Beith J; Parker A; Robbins E; Segara D; Cooper C; Mak C; Chan B; Warrier S; Ginhoux F; Millar E; Powell JE; Williams SR; Liu XS; O’Toole S; Lim E; Lundeberg J; Perou CM; Swarbrick A, 2021, 'A single-cell and spatially resolved atlas of human breast cancers', Nature Genetics, 53, pp. 1334 - 1347, http://dx.doi.org/10.1038/s41588-021-00911-1

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