By Dr Sebastiano Barbieri

Journal articles

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2020, 'Measuring dementia incidence within a cohort of 267,153 older Australians using routinely collected linked administrative data', Scientific Reports, 10, pp. 1 - 14, http://dx.doi.org/10.1038/s41598-020-65273-w

Barbieri S; Gurney-Champion OJ; Klaassen R; Thoeny HC, 2020, 'Deep learning how to fit an intravoxel incoherent motion model to diffusion-weighted MRI', Magnetic Resonance in Medicine, 83, pp. 312 - 321, http://dx.doi.org/10.1002/mrm.27910

Barbieri S; Jorm L, 2019, 'Travel times to hospitals in Australia', Scientific Data, 6, http://dx.doi.org/10.1038/s41597-019-0266-4

Nairz K; Böhm I; Barbieri S; Fiechter D; Hošek N; Heverhagen J, 2018, 'Enhancing patient value efficiently: Medical history interviews create patient satisfaction and contribute to an improved quality of radiologic examinations', Plos One, 13, http://dx.doi.org/10.1371/journal.pone.0203807

Gurney-Champion OJ; Klaassen R; Froeling M; Barbieri S; Stoker J; Engelbrecht MRW; Wilmink JW; Besselink MG; Bel A; Van Laarhoven HWM; Nederveen AJ, 2018, 'Comparison of six fit algorithms for the intravoxel incoherent motion model of diffusionweighted magnetic resonance imaging data of pancreatic cancer patients', Plos One, 13, http://dx.doi.org/10.1371/journal.pone.0194590

Thoeny HC; Barbieri S; Froehlich JM; Turkbey B; Choyke PL, 2017, 'Functional and targeted lymph node imaging in prostate cancer: Current status and future challenges', Radiology, 285, pp. 728 - 743, http://dx.doi.org/10.1148/radiol.2017161517

Steiger P; Barbieri S; Kruse A; Ith M; Thoeny HC, 2017, 'Selection for biopsy of kidney transplant patients by diffusion-weighted MRI', European Radiology, 27, pp. 4336 - 4344, http://dx.doi.org/10.1007/s00330-017-4814-z

Barbieri S; Brönnimann M; Boxler S; Vermathen P; Thoeny HC, 2017, 'Differentiation of prostate cancer lesions with high and with low Gleason score by diffusion-weighted MRI', European Radiology, 27, pp. 1547 - 1555, http://dx.doi.org/10.1007/s00330-016-4449-5

Taouli B; Beer AJ; Chenevert T; Collins D; Lehman C; Matos C; Padhani AR; Rosenkrantz AB; Shukla-Dave A; Sigmund E; Tanenbaum L; Thoeny H; Thomassin-Naggara I; Barbieri S; Corcuera-Solano I; Orton M; Partridge SC; Koh DM, 2016, 'Diffusion-weighted imaging outside the brain: Consensus statement from an ISMRM-sponsored workshop', Journal of Magnetic Resonance Imaging, 44, pp. 521 - 540, http://dx.doi.org/10.1002/jmri.25196

Barbieri S; Donati OF; Froehlich JM; Thoeny HC, 2016, 'Comparison of intravoxel incoherent motion parameters across MR imagers and field strengths: Evaluation in upper abdominal organs', Radiology, 279, pp. 784 - 794, http://dx.doi.org/10.1148/radiol.2015151244

Barbieri S; Schroeder C; Froehlich JM; Pasch A; Thoeny HC, 2016, 'High signal intensity in dentate nucleus and globus pallidus on unenhanced T1-weighted MR images in three patients with impaired renal function and vascular calcification', Contrast Media and Molecular Imaging, 11, pp. 245 - 250, http://dx.doi.org/10.1002/cmmi.1683

Barbieri S; Donati OF; Froehlich JM; Thoeny HC, 2016, 'Impact of the calculation algorithm on biexponential fitting of diffusion-weighted MRI in upper abdominal organs', Magnetic Resonance in Medicine, 75, pp. 2175 - 2184, http://dx.doi.org/10.1002/mrm.25765

Beg MF; Raamana PR; Barbieri S; Wang L, 2013, 'Comparison of four shape features for detecting hippocampal shape changes in early Alzheimer's', Statistical Methods in Medical Research, 22, pp. 439 - 462, http://dx.doi.org/10.1177/0962280212448975

Bauer MHA; Kuhnt D; Barbieri S; Klein J; Becker A; Freisleben B; Hahn HK; Nimsky C, 2013, 'Reconstruction of White Matter Tracts via Repeated Deterministic Streamline Tracking - Initial Experience', Plos One, 8, http://dx.doi.org/10.1371/journal.pone.0063082

Barbieri S; Bauer MHA; Klein J; Moltz J; Nimsky C; Hahn HK, 2012, 'DTI segmentation via the combined analysis of connectivity maps and tensor distances', Neuroimage, 60, pp. 1025 - 1035, http://dx.doi.org/10.1016/j.neuroimage.2012.01.076

Barbieri S; Klein J; Bauer MHA; Nimsky C; Hahn HK, 2012, 'Atlas-based fiber reconstruction from diffusion tensor MRI data', International Journal of Computer Assisted Radiology and Surgery, 7, pp. 959 - 967, http://dx.doi.org/10.1007/s11548-012-0774-6

Barbieri S; Bauer MHA; Klein J; Nimsky C; Hahn HK, 2011, 'Segmentation of fiber tracts based on an accuracy analysis on diffusion tensor software phantoms', Neuroimage, 55, pp. 532 - 544, http://dx.doi.org/10.1016/j.neuroimage.2010.12.069

Bauer MHA; Barbieri S; Klein J; Egger J; Kuhnt D; Freisleben B; Hahn HK; Nimsky C, 2011, 'Boundary estimation of fiber bundles derived from diffusion tensor images', International Journal of Computer Assisted Radiology and Surgery, 6, pp. 1 - 11, http://dx.doi.org/10.1007/s11548-010-0423-x

Conference Papers

Zhou G; Barbieri S, 2025, 'Generating Clinically Realistic EHR Data via a Hierarchy- and Semantics-Guided Transformer', in Frontiers in Artificial Intelligence and Applications, pp. 3944 - 3951, http://dx.doi.org/10.3233/FAIA251280

Kuppens D; Barbieri S; Rauh S; Gurney-Champion O, 2024, 'Generic and Robust Quantitative MRI Parameter Estimation using Neural Controlled Differential Equations', in Proceedings of the International Society for Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition., International Society for Magnetic Resonance in Medicine (ISMRM), presented at 2024 ISMRM & ISMRT Annual Meeting, http://dx.doi.org/10.58530/2024/1204

Kuppens D; van den Berg D; Barbieri S; Nederveen A; Gurney-Champion O, 2023, 'Quantitative MRI Parameter Estimation using Neural Controlled Differential Equations: Proof-of-Concept in Intra-voxel Incoherent Motion', in ISMRM Annual Meeting, ISMRM, presented at 2023 ISMRM & ISMRT Annual Meeting, 03 June 2023 - 08 June 2023, http://dx.doi.org/10.58530/2023/5184

Ottens T; Barbieri S; Orton M; Klaassen R; van Laarhoven H; Crezee H; Nederveen A; Gurney-Champion O, 2022, 'Deep learning DCE-MRI parameter estimation: Application in pancreatic cancer', in Proceedings of the International Society for Magnetic Resonance in Medicine ... Scientific Meeting and Exhibition., International Society for Magnetic Resonance in Medicine (ISMRM), presented at Joint Annual Meeting ISMRM-ESMRMB ISMRT 31st Annual Meeting, http://dx.doi.org/10.58530/2022/4910

Bharat C; Larney S; Barbieri S; Dobbins T; Jones NR; Hickman M; Gisev N; Ali R; Degenhardt L, 2021, 'THE EFFECT OF PERSON, TREATMENT AND PRESCRIBER CHARACTERISTICS ON RETENTION IN OPIOID AGONIST TREATMENT: A 15-YEAR RETROSPECTIVE COHORT STUDY', in DRUG AND ALCOHOL REVIEW, WILEY, pp. S46 - S47, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000715073200121&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Misha P. T. MPT; Barbieri S; Klaassen R; van Laarhoven HWM; Crezee H; While PT; Nederveen AJ; Gurney-Champion OJ, 2021, 'Improved unsupervised physics-informed deep learning for intravoxel-incoherent motion modeling', online, presented at ISMRM 2021, online, 15 May 2021 - 20 May 2021

Barbieri S; Thoeny H, 2017, 'Training an Artificial Neural Network by Diffusion-Weighted MRI Data to Differentiate Between Prostate Cancer With High and With Low Gleason Score', Honolulu, HI, USA, presented at ISMRM 25th Annual Meeting & Exhibition, Honolulu, HI, USA, 22 April 2017 - 27 April 2017

Barbieri S; Torresani B, 2013, 'Basis Selection for Increased Interclass Separability of EEG Signals', Pacific Grove, California, USA, presented at 5th International Brain-Computer Interface Meeting, Pacific Grove, California, USA

Barbieri S; Torresani B, 2013, 'Optimal time-frequency bases for EEG signal classification in BCI context', Brest, France, presented at GRETSI, Brest, France

Moltz JH; Braunewell S; Rühaak J; Heckel F; Barbieri S; Tautz L; Hahn HK; Peitgen HO, 2011, 'Analysis of variability in manual liver tumor delineation in CT scans', in Proceedings International Symposium on Biomedical Imaging, pp. 1974 - 1977, http://dx.doi.org/10.1109/ISBI.2011.5872797

Barbieri S; Bauer M; Klein J; Nimsky C; Hahn H, 2011, 'Analyzing the Accuracy of Fiber Tracking in Infiltrated Regions via Tumor Growth Simulation', Providence, Rhode Island, USA, presented at IEEE Visualization, Working with Uncertainty Workshop, Providence, Rhode Island, USA

Barbieri S; Klein J; Nimsky C; Hahn HK, 2010, 'Assessing fiber tracking accuracy via diffusion tensor software models', in Progress in Biomedical Optics and Imaging Proceedings of SPIE, http://dx.doi.org/10.1117/12.844215

Klein J; Grötsch A; Betz D; Barbieri S; Friman O; Stieltjes B; Hildebrandt H; Hahn HK, 2010, 'Qualitative and quantitative analysis of probabilistic and deterministic fiber tracking', in Progress in Biomedical Optics and Imaging Proceedings of SPIE, http://dx.doi.org/10.1117/12.843472

Barbieri S; Bauer M; Klein J; Nimsky C; Hahn H, 2010, 'A variational, nonparametric approach to the fuzzy segmentation of diffusion tensor images', Beijing, China, presented at MICCAI workshop on computational diffusion MRI (CDMRI), Beijing, China, 20 September 2010 - 24 September 2010

Bauer MHA; Egger J; O'Donnell T; Barbieri S; Klein J; Freisleben B; Hahn HK; Nimsky C, 2010, 'A fast and robust graph-based approach for boundary estimation of fiber bundles relying on fractional anisotropy maps', in Proceedings International Conference on Pattern Recognition, pp. 4016 - 4019, http://dx.doi.org/10.1109/ICPR.2010.1155

Bauer MHA; Barbieri S; Egger J; Kuhnt D; Klein J; Hahn HK; Freisleben B; Nimsky C, 2010, 'Segmentation of fiber tract systems with a beam-based approach and smoothing of the FA and angular cards', in Ceur Workshop Proceedings, pp. 147 - 151

Bauer M; Barbieri S; Klein J; Egger J; Kuhnt D; Hahn H; Freisleben B; Nimsky C, 2010, 'A Ray-based Approach for Boundary Estimation of Fiber Bundles Derived from Diffusion Tensor Imaging', Geneva, Switzerland, presented at Computer Assisted Radiology and Surgery, Geneva, Switzerland

Barbieri S; Klein J; Nimsky C; Hahn H, 2010, 'Towards Image-Dependent Safety Hulls for Fiber Tracking', Stockholm, Sweden, presented at ISMRM, Stockholm, Sweden

Barbieri S; Welk M; Weickert J, 2008, 'Variatlonal registration of tensor-valued images', in 2008 IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops Cvpr Workshops, http://dx.doi.org/10.1109/CVPRW.2008.4562964

Conference Abstracts

Mohammed F; Meredith T; Pomeroy A; Barbieri S; Meijering E; Kovacic J; Hayward C; Muller D; Feneley M; Namasivayam M, 2025, 'Abstract 4362307: Automated Aortic Valve Motion Analysis from Echocardiography for Efficient Classification of Aortic Stenosis Severity', in Circulation, Wolters Kluwer, Vol. 152, pp. a4362307 - a4362307, http://dx.doi.org/10.1161/circ.152.suppl_3.4362307

Meredith T; Mohammed F; Pomeroy A; Barbieri S; Meijering E; Jorm L; Roy D; Kovacic J; Feneley M; Hayward C; Muller D; Namasivayam M, 2025, 'Machine learning cluster analysis identifies increased 12-month mortality risk in transcatheter aortic valve replacement recipients', in Frontiers in Cardiovascular Medicine, Vol. 12, http://dx.doi.org/10.3389/fcvm.2025.1444658

Bharat C; Gisev N; Barbieri S; Dobbins T; Larney S; Buizen L; Degenhardt L, 2023, 'Association of Opioid Analgesics, Benzodiazepines, Gabapentinoids, and Opioid Agonist Treatment With Mortality Among Individuals With Opioid Dependence', in DRUG AND ALCOHOL DEPENDENCE, ELSEVIER IRELAND LTD, CO, Denver, Vol. 260, presented at 85th Annual Scientific Meeting of the College-on-Problems-of-Drug-Dependence (CPDD), CO, Denver, 17 July 2023 - 21 July 2023, http://dx.doi.org/10.1016/j.drugalcdep.2023.110845

Bharat C; Larney S; Barbieri S; Dobbins T; Jones NR; Hickman M; Gisev N; Ali R; Degenhardt L, 2021, 'The effect of prescriber, treatment, and client characteristics on retention in opioid agonist treatment: A 15-year retrospective cohort study', in PHARMACOEPIDEMIOLOGY AND DRUG SAFETY, WILEY, Vol. 30, pp. 357 - 357, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000687807300726&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Welberry H; Jorm L; Schaffer A; Barbieri S; Hsu B; Harris M; Hall J; Brodaty H, 2021, 'Changing general practitioner when entering residential aged care: impact on psychotropic medicine use and polypharmacy in 2,250 Australians with dementia', in Australian Dementia Forum, presented at Australian Dementia Forum

Hungerford P; Barbieri S; Schuler T; Eade T, 2020, 'Data Standardisation in Radiotherapy Using Deep Learning', in SPIE Medical Imaging, Houston, Texas, presented at SPIE Medical Imaging, Houston, Texas

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2020, 'Impact of prior home care on length-of-stay in residential care for Australians living with dementia', in Australian Dementia Forum, Adelaide, Australia, presented at Australian Dementia Forum, Adelaide, Australia

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2020, 'Measuring dementia incidence within a cohort of 267,153 older Australians using routinely collected linked administrative data', in 34th International Conference of Alzheimer’s Disease, Singapore, presented at 34th International Conference of Alzheimer’s Disease, Singapore

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2020, 'Measuring dementia incidence within a cohort of 267,153 older Australians using routinely collected linked administrative data', in International Population Data Linkage Network, presented at International Population Data Linkage Network

Barbieri S; Perez Concha O; Kotwal S; Gallagher M; Ritchie A; Jorm L, 2019, 'A Deep Representation of Longitudinal EMR Data Used for Predicting Readmission to the ICU and Describing Patients-at-Risk', in HSRAANZ, Auckland, New Zealand, presented at HSRAANZ, Auckland, New Zealand

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2019, 'Impact of prior home care on length of stay in residential care for Australians with dementia', in HSRAANZ, Auckland, New Zealand, presented at HSRAANZ, Auckland, New Zealand

Welberry H; Brodaty H; Barbieri S; Hsu B; Jorm L, 2019, 'Transitions through aged care in the last five years of life among those with dementia', in Australian Dementia Forum, Hobart, TAS, Australia, presented at Australian Dementia Forum, Hobart, TAS, Australia

Welberry H; Brodaty H; Hsu B; Barbieri S; Jorm L, 2018, 'Estimating dementia incidence and prevalence with multiple linked datasets', in Australian Epidemiological Associating Meeting, Fremantle, WA, Australia, presented at Australian Epidemiological Associating Meeting, Fremantle, WA, Australia

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