Select Publications

Journal articles

Lisciandro JG; Prescott SL; Nadal-Sims MG; Devitt CJ; Pomat W; Siba PM; Holt PG; Strickland D; van den Biggelaar AHJ, 2012, 'Comparison of neonatal T regulatory cell function in Papua New Guinean and Australian newborns.', Pediatr Allergy Immunol, 23, pp. 173 - 180, http://dx.doi.org/10.1111/j.1399-3038.2011.01242.x

Jackson KJ; Wang Y; Gaeta BA; Pomat W; Siba PM; Sewell WA; Collins AM, 2012, 'Divergent human populations show extensive shared IGK rearrangements in peripheral blood B cells', Immunogenetics, 64, pp. 3 - 14, http://dx.doi.org/10.1007/s00251-011-0559-z

van den Biggelaar AHJ; Pomat WS; Phuanukoonnon S; Michael A; Aho C; Nadal-Sims MA; Devitt CJ; Jacoby PA; Hales BJ; Smith W-A; Mitchell T; Wiertsema S; Richmond P; Siba P; Holt PG; Lehmann D, 2012, 'Effect of early carriage of Streptococcus pneumoniae on the development of pneumococcal protein-specific cellular immune responses in infancy.', Pediatr Infect Dis J, 31, pp. 243 - 248, http://dx.doi.org/10.1097/INF.0b013e318245a5a8

Lisciandro JG; Prescott SL; Nadal-Sims MG; Devitt CJ; Richmond PC; Pomat W; Siba PM; Holt PG; Strickland DH; van den Biggelaar AHJ, 2012, 'Neonatal antigen-presenting cells are functionally more quiescent in children born under traditional compared with modern environmental conditions.', J Allergy Clin Immunol, 130, pp. 1167 - 1174.e10, http://dx.doi.org/10.1016/j.jaci.2012.06.005

Lisciandro JG; Prescott SL; Nadal-Sims MG; Devitt CJ; Pomat W; Siba PM; Tulic MC; Holt PG; Strickland D; van den Biggelaar AHJ, 2012, 'Ontogeny of Toll-like and NOD-like receptor-mediated innate immune responses in Papua New Guinean infants.', PLoS One, 7, pp. e36793, http://dx.doi.org/10.1371/journal.pone.0036793

Chidlow GR; Laing IA; Harnett GB; Greenhill AR; Phuanukoonnon S; Siba PM; Pomat WS; Shellam GR; Smith DW; Lehmann D, 2012, 'Respiratory viral pathogens associated with lower respiratory tract disease among young children in the highlands of Papua New Guinea.', J Clin Virol, 54, pp. 235 - 239, http://dx.doi.org/10.1016/j.jcv.2012.04.008

van den Biggelaar AHJ; Pomat W; Bosco A; Phuanukoonnon S; Devitt CJ; Nadal-Sims MA; Siba PM; Richmond PC; Lehmann D; Holt PG, 2011, 'Pneumococcal conjugate vaccination at birth in a high-risk setting: no evidence for neonatal T-cell tolerance.', Vaccine, 29, pp. 5414 - 5420, http://dx.doi.org/10.1016/j.vaccine.2011.05.065

Wang Y; Jackson KJ; Gaeta BA; Pomat W; Rim ; Sewell WA; Collins AM, 2011, 'Genomic screening by 454 pyrosequencing identifies a new human IGHV gene and sixteen other new IGHV allelic variants', Immunogenetics, 63, pp. 259 - 265, http://dx.doi.org/10.1007/s00251-010-0510-8

Wang Y; Jackson KJ; Chen Z; Gaeta BA; Siba P; Pomat W; Walpole E; Rimmer J; Sewell WA; Collins AM, 2011, 'IgE sequences in individuals living in an area of endemic parasitism show little mutational evidence of antigen selection', Scandinavian Journal of Immunology, 73, pp. 496 - 504, http://dx.doi.org/10.1111/j.1365-3083.2011.02525.x

Pomat WS; Greenhill AR; Lehmann D, 2010, 'Pneumonia in Papua New Guinea: lessons learnt for the way forward.', Papua and New Guinea medical journal, 53, pp. 89 - 93

Phuanukoonnon S; Reeder JC; Pomat WS; Van den Biggelaar AH; Holt PG; Saleu G; Opa C; Michael A; Aho C; Yoannes M; Francis J; Orami T; Namuigi P; Siba PM; Richmond PC; Lehmann D; Neonatal Pneumococcal Conjugate Vaccine Trial Study Team , 2010, 'A neonatal pneumococcal conjugate vaccine trial in Papua New guinea: study population, methods and operational challenges.', Papua and New Guinea medical journal, 53, pp. 191 - 206

Greenhill A; Pomat W; Duke T; Lagani W; Mokela D; Lehmann D, 2010, 'The role of biomedical research in the fight against pneumonia in Papua New Guinea.', P N G Med J, 53, pp. 1 - 4, https://www.ncbi.nlm.nih.gov/pubmed/22768473

van den Biggelaar AHJ; Richmond PC; Pomat WS; Phuanukoonnon S; Nadal-Sims MA; Devitt CJ; Siba PM; Lehmann D; Holt PG, 2009, 'Neonatal pneumococcal conjugate vaccine immunization primes T cells for preferential Th2 cytokine expression: a randomized controlled trial in Papua New Guinea.', Vaccine, 27, pp. 1340 - 1347, http://dx.doi.org/10.1016/j.vaccine.2008.12.046

Francis JP; Richmond PC; Pomat WS; Michael A; Keno H; Phuanukoonnon S; Nelson JB; Whinnen M; Heinrich T; Smith W-A; Prescott SL; Holt PG; Siba PM; Lehmann D; van den Biggelaar AHJ, 2009, 'Maternal antibodies to pneumolysin but not to pneumococcal surface protein A delay early pneumococcal carriage in high-risk Papua New Guinean infants.', Clin Vaccine Immunol, 16, pp. 1633 - 1638, http://dx.doi.org/10.1128/CVI.00247-09

van den Biggelaar AHJ; Prescott SL; Roponen M; Nadal-Sims MA; Devitt CJ; Phuanukoonnon S; Pomat W; Tulic MK; Lehmann D; Siba PM; Richmond PC; Holt PG, 2009, 'Neonatal innate cytokine responses to BCG controlling T-cell development vary between populations.', J Allergy Clin Immunol, 124, pp. 544 - 550.e2, http://dx.doi.org/10.1016/j.jaci.2009.03.040

Lehmann D; Pomat WS; Riley ID; Alpers MP, 2003, 'Studies of maternal immunisation with pneumococcal polysaccharide vaccine in Papua New Guinea.', Vaccine, 21, pp. 3446 - 3450, http://dx.doi.org/10.1016/s0264-410x(03)00348-7

Lehmann D; Pomat WS; Combs B; Dyke T; Alpers MP, 2002, 'Maternal immunization with pneumococcal polysaccharide vaccine in the highlands of Papua New Guinea.', Vaccine, 20, pp. 1837 - 1845, http://dx.doi.org/10.1016/s0264-410x(02)00040-3

Pomat WS; Lehmann D; Sanders RC; Lewis DJ; Wilson J; Rogers S; Dyke T; Alpers MP, 1994, 'Immunoglobulin G antibody responses to polyvalent pneumococcal vaccine in children in the highlands of Papua New Guinea.', Infect Immun, 62, pp. 1848 - 1853, http://dx.doi.org/10.1128/iai.62.5.1848-1853.1994

POMAT WS; SMITH TA; SANDERS RC; WITT CS; MONTGOMERY J; LEHMANN D; ALPERS MP, 1993, 'LEVELS OF ANTIPNEUMOCOCCAL ANTIBODIES IN YOUNG-CHILDREN IN PAPUA-NEW-GUINEA', EPIDEMIOLOGY AND INFECTION, 111, pp. 109 - 119, http://dx.doi.org/10.1017/S0950268800056739

Witt CS; Pomat W; Lehmann D; Alpers MP, 1991, 'Antibodies to pneumococcal polysaccharides in pneumonia and response to pneumococcal vaccination in young children in Papua New Guinea.', Clin Exp Immunol, 83, pp. 219 - 224, http://dx.doi.org/10.1111/j.1365-2249.1991.tb05618.x

Witt CS; Pomat W, 1991, 'Immune function risk factors for acute lower respiratory tract infections.', P N G Med J, 34, pp. 211 - 214, https://www.ncbi.nlm.nih.gov/pubmed/1750266

Witt CS; Montgomery JM; Pomat W; Lehmann D; Alpers MP, 1990, 'Detection of Streptococcus pneumoniae and Haemophilus influenzae type b antigens in the serum and urine of patients with pneumonia in Papua New Guinea: comparison of latex agglutination and counterimmunoelectrophoresis.', Rev Infect Dis, 12 Suppl 8, pp. S1001 - S1005, http://dx.doi.org/10.1093/clinids/12.supplement_8.s1001

Witt CS; Pomat W; Alpers MP, 1989, 'Pneumococcal antibody concentrations in young Papua New Guinean Highland children with pneumonia.', Pediatr Infect Dis J, 8, pp. 533 - 534, http://dx.doi.org/10.1097/00006454-198908000-00013

Conference Papers

Scoullar M; Boeuf P; Peach E; Kearney E; Fidelis R; Tokmun K; Melepia P; Bradshaw C; Elijah A; Fehler G; Siba P; Erskine S; Mokany E; Kennedy E; Umbers A; Luchters S; Robinson L; Wong N; Vallely A; Badman S; Vallely L; Fowkes F; Morgan C; Pomat W; Crabb B; Beeson J; Study Team H, 2021, 'O16.1 High burden of reproductive tract infections and poor sexual and reproductive health in pregnancy and postpartum in Papua New Guinea', in Female reproductive health for STIs and HIV, BMJ Publishing Group Ltd, presented at Abstracts for the STI & HIV World Congress, July 14–17 2021, http://dx.doi.org/10.1136/sextrans-2021-sti.140

Badman SG; Vallely LM; Toliman P; Kariwiga G; Tabrizi S; Pomat W; Guy R; Homer C; Luchters S; Morgan C; Garland SM; Rogerson S; Whiley D; Mola GDL; Wand H; Donovan B; Causer L; Siba P; Kaldor JM; Vallely A, 2015, 'POINT-OF-CARE TESTING AND IMMEDIATE TREATMENT OF CURABLE SEXUALLY TRANSMITTED AND GENITAL INFECTIONS AMONG ANTENATAL WOMEN IN PAPUA NEW GUINEA', in SEXUALLY TRANSMITTED INFECTIONS, BMJ PUBLISHING GROUP, pp. A27 - A27, http://dx.doi.org/10.1136/sextrans-2015-052270.85

Laing IA; Lai M; Jacoby P; Pomat W; Orami T; Phuanukoonnon S; Opa C; Holt PG; van den Biggelaar A; Richmond P; Siba P; Lehmann D, 2011, 'IL-8 Polymorphisms Associated With Earlier And Increased Incidence Of Acute Lower Respiratory Infections In Children From Papua New Guinea (PNG)', in C25. PEDIATRIC RESPIRATORY INFECTIONS, American Thoracic Society, presented at American Thoracic Society 2011 International Conference, May 13-18, 2011 • Denver Colorado, http://dx.doi.org/10.1164/ajrccm-conference.2011.183.1_meetingabstracts.a4162

Reports

Newland J; Neuendorf N; Vallely L; Mek A; Vengiau G; Farquhar R; Boli-Neo R; Seymour M; Wratten M; Aeno H; Trumb RN; Kerry Z; Huang KL; Maalsen A; Homer C; Robinson L; Majumdar S; Vallely A; Laman M; Pomat W; Kelly-Hanku A, 2022, COVID-19 and its impacts on primary health services and public health infectious disease programs in Papua New Guinea, http://dx.doi.org/10.26190/6mhp-gc18

Preprints

Middleton J; Colthart G; Dem F; Elkins A; Fairhead J; Hazell RJ; Head MG; Inacio J; Jimbudo M; Jones CI; Laman M; MacGregor H; Novotny V; Peck M; Philip J; Paliau J; Pomat W; Stockdale JA; Sui S; Stewart AJ; Umari R; Walker SL; Cassell J, 2023, Health service needs and perspectives of a rainforest conserving community in Papua New Guinea’s Ramu lowlands: a combined clinical and rapid anthropological assessment with parallel treatment of urgent cases, , http://dx.doi.org/10.31219/osf.io/ahvq3

Quinn L; Moltke I; Whitfield J; Alpers M; Campbell T; Hummerich H; Pomat W; Siba P; Koki G; Collinge J; Hellenthal G; Mead S, 2022, Population Structure and Migration in the Eastern Highlands of Papua New Guinea; a Region Impacted by the kuru Epidemic, , http://dx.doi.org/10.1101/2022.09.26.509478

Saweri OPM; Batura N; Pulford J; Khan MM; Hou X; Pomat WS; Vallely AJ; Wiseman V, 2022, Investigating Health Service Availability and Readiness for Antenatal Testing and Treatment for HIV and Syphilis in Papua New Guinea, , http://dx.doi.org/10.21203/rs.3.rs-1281575/v1

Steinig E; Pitt M; Aglua I; Suttie A; Greenhill A; Heather C; Firth C; Smith S; Pomat W; Horwood P; McBryde E; Coin L, 2022, Genomic neighbor typing for bacterial outbreak surveillance, , http://dx.doi.org/10.1101/2022.02.05.479210

Dyson ZA; Malau E; Horwood PF; Ford R; Siba V; Yoannes M; Pomat W; Passey M; Judd LM; Ingle DJ; Williamson DA; Dougan G; Greenhill AR; Holt KE, 2021, Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials, , http://dx.doi.org/10.1101/2021.09.27.21264209

Martínez PM; Gabong R; Balanza N; Luana S; Sanz S; Raulo S; Elizah A; Wali C; Paivu B; Dalmas J; Tabie S; Karl S; Laman M; Pomat W; Mitjà O; Baro B; Bassat Q, 2021, Coverage, Determinants of Use and Repurposing of Long-Lasting Insecticidal Nets Two Years After a Mass Distribution in Lihir Islands, Papua New Guinea: A Cross-Sectional Study, , http://dx.doi.org/10.21203/rs.3.rs-517737/v1

Steinig E; Duchêne S; Aglua I; Greenhill A; Ford R; Yoannes M; Jaworski J; Drekore J; Urakoko B; Poka H; Wurr C; Ebos E; Nangen D; Laman M; Manning L; Firth C; Smith S; Pomat W; Tong S; Coin L; McBryde E; Horwood P, 2021, Phylodynamic modelling of bacterial outbreaks using nanopore sequencing, , http://dx.doi.org/10.1101/2021.04.30.442218

Steinig E; Aglua I; Duchêne S; Meehan MT; Yoannes M; Firth C; Jaworski J; Drekore J; Urakoko B; Poka H; Wurr C; Ebos E; Nangen D; Müller E; Mulvey P; Jackson C; Blomfeldt A; Aamot HV; Laman M; Manning L; Earls M; Coleman DC; Greenhill A; Ford R; Stegger M; Syed MA; Jamil B; Monecke S; Ehricht R; Smith S; Pomat W; Horwood P; Tong SYC; McBryde E, 2021, Phylodynamic signatures in the emergence of community-associated MRSA, , http://dx.doi.org/10.1101/2021.04.30.442212

Scoullar MJL; Boeuf P; Peach E; Fidelis R; Tokmun K; Melepia P; Elijah A; Bradshaw CS; Fehler G; Siba PM; Erskine S; Mokany E; Kennedy E; Umbers AJ; Luchters S; Robinson LJ; Wong NC; Vallely A; Badman SG; Vallely LM; Fowkes FJI; Morgan C; Pomat W; Crabb BS; Beeson JG, 2020, High burden of Mycoplasma genitalium and other reproductive tract infections among pregnant women in Papua New Guinea, , http://dx.doi.org/10.1101/2020.05.22.109983

Eghrari D; Scoullar M; Wilson AN; Peach E; Elijah A; Melepia P; SupSup H; Vallely LM; Siba PM; Kennedy E; Vogel JP; Homer C; Robinson LJ; Fowkes F; Pomat W; Crabb BS; Beeson JG; Morgan C; Team HMHBS, Low Knowledge of Newborn Danger Signs Among Pregnant Women in Papua New Guinea and Implications for Health Seeking Behaviour in Early Infancy – Findings from a Longitudinal Study, , http://dx.doi.org/10.2139/ssrn.4111169

Pham BNN; Jorry R; Abori N; Silas VD; Okely AD; Pomat W, Non-Communicable Diseases Attributed Mortality and Associated Sociodemographic Factors in Papua New Guinea: Evidence from Comprehensive Health and Epidemiological Surveillance System, , http://dx.doi.org/10.2139/ssrn.3915679

Pham BNN; Maraga S; Kue L; Silas VD; Abori N; Jorry R; Okely AD; Pomat W, Prevalence and Sociodemographic Distribution of Injuries-Attributed Mortalities in Papua New Guinea: Evidence from the Comprehensive Health and Epidemiological Surveillance System, , http://dx.doi.org/10.2139/ssrn.4052656

Pham BNN; Abori N; Silas VD; Jorry R; Pomat W, Tuberculosis and HIV/AIDS-Attributed Mortalities and Associated Socioeconomic Demographic Factors in Papua New Guinea: Evidence From the Comprehensive Health and Epidemiological Surveillance System, , http://dx.doi.org/10.2139/ssrn.3889356


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