Select Publications
Book Chapters
2024, 'Ancient starch and usewear analyses of an excavated pestle fragment from the Upper Kaironk Valley, Madang Province, Papua New Guinea', in Forty Years in the South Seas: Archaeological Perspectives on the Human History of Papua New Guinea and the Western Pacific Region, ANU Press, pp. 391 - 415, http://dx.doi.org/10.22459/ta57.2024.18
,2020, 'Models of Membrane-Mediated Processes: Cascades and Cycles in Insulin Action', in Systems Medicine: Integrative, Qualitative and Computational Approaches: Volume 1-3, pp. 143 - 155, http://dx.doi.org/10.1016/B978-0-12-801238-3.11348-0
,2018, 'The Shape of Things to Come—Using Geometric and Morphometric Analyses to Identify Archaeological Starch Grains', in Mathematics for Industry, Springer Singapore, pp. 1 - 6, http://dx.doi.org/10.1007/978-981-10-7811-8_1
,2008, 'High-throughput analysis of the dynamics of recycling cell surface proteins', in Ivanov AI (ed.), Exocytosis and Endocytosis, Humana Press, NJ USA, pp. 129 - 146
,1995, 'Neural Thermodynamics for Biological Ensembles', in Cho S; Oh J-H; Kwon C (ed.), Neural Networks: The Statistical Mechanics Perspective, World Scientific Publishing Company Incorporated
,Journal articles
2024, 'Corrigendum to ‘A 47,000 year archaeological and palaeoenvironmental record from Juukan 2 rockshelter on the western Hamersley Plateau of the Pilbararegion, Western Australia’ [Quaternary Sci. Rev. 338 (2024) 108823] (Quaternary Science Reviews (2024) 338, (S027737912400324X), (10.1016/j.quascirev.2024.108823))', Quaternary Science Reviews, 342, http://dx.doi.org/10.1016/j.quascirev.2024.108892
,2024, 'Tropomyosin Isoforms Segregate into Distinct Clusters on Single Actin Filaments', Biomolecules, 14, http://dx.doi.org/10.3390/biom14101240
,2024, 'The Distance Between: An Algorithmic Approach to Comparing Stochastic Models to Time-Series Data', Bulletin of Mathematical Biology, 86, http://dx.doi.org/10.1007/s11538-024-01331-y
,2024, 'A 47,000 year archaeological and palaeoenvironmental record from Juukan 2 rockshelter on the western Hamersley Plateau of the Pilbara region, Western Australia', Quaternary Science Reviews, 338, http://dx.doi.org/10.1016/j.quascirev.2024.108823
,2024, 'APPLYING HYPERGRAPHS TO STUDIES IN QUANTITATIVE BIOLOGY', LIFE: International Journal of Health and Life-Sciences, 9, pp. 21 - 33, http://dx.doi.org/10.20319/lijhls.2024.9.2133
,2024, 'Periodic insulin stimulation of Akt: Dynamic steady states and robustness', Mathematical Biosciences, 367, http://dx.doi.org/10.1016/j.mbs.2023.109113
,2023, 'Oncolytic virus treatment of human breast cancer cells: Modelling therapy efficacy', Journal of Theoretical Biology, 560, http://dx.doi.org/10.1016/j.jtbi.2022.111394
,2022, '65,000-years of continuous grinding stone use at Madjedbebe, Northern Australia', Scientific Reports, 12, http://dx.doi.org/10.1038/s41598-022-15174-x
,2022, 'Metabolomics and Lipidomics Signatures of Insulin Resistance and Abdominal Fat Depots in People Living with Obesity', Metabolites, 12, pp. 1272, http://dx.doi.org/10.3390/metabo12121272
,2021, 'Holocene grinding stones at Madjedbebe reveal the processing of starchy plant taxa and animal tissue', Journal of Archaeological Science: Reports, 35, http://dx.doi.org/10.1016/j.jasrep.2020.102754
,2020, 'From insulin to Akt: Time delays and dominant processes', Journal of Theoretical Biology, 507, http://dx.doi.org/10.1016/j.jtbi.2020.110454
,2020, 'Functional studies of flaked and ground stone artefacts reveal starchy tree nut and root exploitation in mid-Holocene highland New Guinea', Holocene, 30, pp. 1360 - 1374, http://dx.doi.org/10.1177/0959683620919983
,2020, 'Irradiation impairs mitochondrial function and skeletal muscle oxidative capacity: significance for metabolic complications in cancer survivors', Metabolism: Clinical and Experimental, 103, pp. 154025, http://dx.doi.org/10.1016/j.metabol.2019.154025
,2020, 'Enhancing oncolytic virotherapy: Observations from a Voronoi Cell-Based model', Journal of Theoretical Biology, 485, pp. 110052, http://dx.doi.org/10.1016/j.jtbi.2019.110052
,2020, 'Emergence of a Neolithic in highland New Guinea by 5000 to 4000 years ago', Science Advances, 6, http://dx.doi.org/10.1126/sciadv.aay4573
,2020, 'Obesity and Insulin Resistance Are Inversely Associated with Serum and Adipose Tissue Carotenoid Concentrations in Adults', Journal of Nutrition, 150, pp. 38 - 46, http://dx.doi.org/10.1093/jn/nxz184
,2020, 'Tropical Foodways and Exchange along the Coastal Margin of Northeastern New Guinea', Journal of Field Archaeology, pp. 498 - 511, http://dx.doi.org/10.1080/00934690.2020.1786285
,2019, 'Longitudinal changes in insulin resistance in normal weight, overweight and obese individuals', Journal of Clinical Medicine, 8, pp. 623, http://dx.doi.org/10.3390/jcm8050623
,2019, 'Crosstalk in transition: the translocation of Akt', Journal of Mathematical Biology, 78, pp. 919 - 942, http://dx.doi.org/10.1007/s00285-018-1297-8
,2019, 'Ancient starch analysis of grinding stones from Kokatha Country, South Australia', Journal of Archaeological Science: Reports, 23, pp. 178 - 188, http://dx.doi.org/10.1016/j.jasrep.2018.10.023
,2018, 'Interactions of tropomyosin Tpm1.1 on a single actin filament: A method for extraction and processing of high resolution TIRF microscopy data', PLoS ONE, 13, pp. e0208586, http://dx.doi.org/10.1371/journal.pone.0208586
,2018, 'Modelling heterogeneity in viral-tumour dynamics: The effects of gene-attenuation on viral characteristics', Journal of Theoretical Biology, 454, pp. 41 - 52, http://dx.doi.org/10.1016/j.jtbi.2018.05.030
,2018, 'Modelling combined virotherapy and immunotherapy: strengthening the antitumour immune response mediated by IL-12 and GM-CSF expression', Letters in Biomathematics, 5, pp. S99 - S116, http://dx.doi.org/10.1080/23737867.2018.1438216
,2018, 'Treating cancerous cells with viruses: insights from a minimal model for oncolytic virotherapy', Letters in Biomathematics, 5, pp. S117 - S136, http://dx.doi.org/10.1080/23737867.2018.1440977
,2018, 'Mathematical Modelling of the Interaction Between Cancer Cells and an Oncolytic Virus: Insights into the Effects of Treatment Protocols', Bulletin of Mathematical Biology, 80, pp. 1615 - 1629, http://dx.doi.org/10.1007/s11538-018-0424-4
,2018, 'New data from an open Neolithic site in Eastern Indonesia', Asian Perspectives, 57, pp. 222 - 243, http://dx.doi.org/10.1353/asi.2018.0015
,2018, 'Modelling Combined Virotherapy and Immunotherapy: Strengthening the Antitumour Immune Response Mediated by IL-12 and GM-CSF Expression', Letters in Biomathematics, 5, http://dx.doi.org/10.30707/lib5.2jennera
,2018, 'Treating Cancerous Cells with Viruses: Insights from Aminimal Model for Oncolytic Virotherapy', Letters in Biomathematics, 5, http://dx.doi.org/10.30707/lib5.2jenner
,2017, 'Association of muscle lipidomic profile with high-fat diet-induced insulin resistance across five mouse strains', Scientific Reports, 7, pp. 13914, http://dx.doi.org/10.1038/s41598-017-14214-1
,2016, 'Hyperactivation of the insulin signaling pathway improves intracellular proteostasis by coordinately up-regulating the proteostatic machinery in adipocytes', Journal of Biological Chemistry, 291, pp. 25629 - 25640, http://dx.doi.org/10.1074/jbc.M116.741140
,2016, 'Effect of surface chemistry on tropomyosin binding to actin filaments on surfaces', Cytoskeleton, 73, pp. 729 - 738, http://dx.doi.org/10.1002/cm.21342
,2016, 'Human-environment dynamics during the Holocene in the Australian Wet Tropics of NE Queensland: A starch and phytolith study', Journal of Anthropological Archaeology, 44, pp. 216 - 234, http://dx.doi.org/10.1016/j.jaa.2016.07.007
,2016, 'Regulation of glucose homeostasis and insulin action by ceramide acyl-chain length: A beneficial role for very long-chain sphingolipid species', Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids, 1861, pp. 1828 - 1839, http://dx.doi.org/10.1016/j.bbalip.2016.08.016
,2016, 'The impact of tropomyosins on actin filament assembly is isoform specific', BioArchitecture, 6, pp. 61 - 75, http://dx.doi.org/10.1080/19490992.2016.1201619
,2016, 'The Akt switch model: Is location sufficient?', Journal of Theoretical Biology, 398, pp. 103 - 111, http://dx.doi.org/10.1016/j.jtbi.2016.03.005
,2016, 'Rab14 limits the sorting of Glut4 from endosomes into insulin-sensitive regulated secretory compartments in adipocytes', Biochemical Journal, 473, pp. 1315 - 1327, http://dx.doi.org/10.1042/BCJ20160020
,2016, 'Skeletal muscle and plasma lipidomic signatures of insulin resistance and overweight/obesity in humans', Obesity, 24, pp. 908 - 916, http://dx.doi.org/10.1002/oby.21448
,2016, 'Binding of transcription factor GabR to DNA requires recognition of DNA shape at a location distinct from its cognate binding site', Nucleic Acids Research, 44, pp. 1411 - 1420, http://dx.doi.org/10.1093/nar/gkv1466
,2016, 'Glut4 is sorted from a Rab10 GTPase-independent constitutive recycling pathway into a highly insulinresponsive Rab10 GTPase-dependent sequestration pathway after adipocyte differentiation', Journal of Biological Chemistry, 291, pp. 773 - 789, http://dx.doi.org/10.1074/jbc.M115.694919
,2015, 'Dietary acid load, metabolic acidosis and insulin resistance - Lessons from cross-sectional and overfeeding studies in humans', Clinical Nutrition, 35, pp. 1084 - 1090, http://dx.doi.org/10.1016/j.clnu.2015.08.002
,2015, 'Selective insulin resistance in adipocytes', Journal of Biological Chemistry, 290, pp. 11337 - 11348, http://dx.doi.org/10.1074/jbc.M114.623686
,2015, 'A receptor state space model of insulin signalling system in glucose transport', Mathematical Medicine and Biology, First published online: February 10, 2015, pp. 1 - 17, http://dx.doi.org/10.1093/imammb/dqv003
,2015, 'What starch grain is that? - A geometric morphometric approach to determining plant species origin', Journal of Archaeological Science, 58, pp. 9 - 25, http://dx.doi.org/10.1016/j.jas.2015.03.014
,2014, 'Glycemic effects and safety of L-glutamine supplementation with or without sitagliptin in type 2 diabetes patients-a randomized study', PLoS ONE, 9, pp. e113366, http://dx.doi.org/10.1371/journal.pone.0113366
,2014, 'Insulin-regulated Glut4 translocation: Membrane protein trafficking with six distinctive steps', Journal of Biological Chemistry, 289, pp. 17280 - 17298, http://dx.doi.org/10.1074/jbc.M114.555714
,