By Professor Fabio Luciani

Preprints

Parikh D; Xue A; Liao H-C; Wishart C; Ashhurst TM; Putri GH; Luciani F; Naik SH; Salim A; Marsh-Wakefield F; Louie RHY, 2025, Identifying the Minimal Number of Protein Markers for Cell Type Annotation Using MiniMarS, http://dx.doi.org/10.1101/2025.07.14.664825

Louie RHY; Cai C; Singh M; Deveson I; Ferguson J; Amos T; McGuire HM; Samir J; Gowrishankar K; Adikari T; Balderas R; Bishop D; Gottlieb D; Blyth E; Micklethwaite K; Luciani F, 2022, CAR⁺ and CAR^- T cells differentiate into an NK-like subset that is associated with increased inflammatory cytokines following infusion, http://dx.doi.org/10.1101/2022.03.29.22273013

Samir J; Rizzetto S; Gupta M; Luciani F, 2019, Exploring and analysing immune single cell multi-omics data with VDJView, http://dx.doi.org/10.1101/613083

Tikoo S; Jain R; Martinez B; Song R; Wielscher M; Rizzetto S; Shaw LE; Mitchell AJ; Torres-Pacheco ME; Luciani F; Farlik M; Wong JJ; Jung S; Fraser ST; Weninger W, A distinct CD115- erythro-myeloid precursor present at the maternal-embryonic interface and in the bone marrow of adult mice, http://dx.doi.org/10.1101/2021.07.24.453629

Bull RA; Adikari T; Ferguson JM; Hammond JM; Stevanovski I; Beukers AG; Naing Z; Yeang M; Verich A; Gamaarachchi H; Kim KW; Luciani F; Stelzer-Braid S; Eden J-S; Rawlinson WD; van Hal SJ; Deveson IW, Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis, http://dx.doi.org/10.1101/2020.08.04.236893

Sutton HJ; Aye R; Idris AH; Vistein R; Nduati E; Kai O; Mwacharo J; Li X; Gao X; Andrews TD; Koutsakos M; Nguyen THO; Nekrasov M; Milburn P; Ethala A; Berry AA; Natasha K; Chakravarty S; Sim BKL; Wheatley AK; Kent SJ; Hoffman SL; Lyke KE; Bejon P; Luciani F; Kedzierska K; Seder RA; Ndungu FM; Cockburn IA, Atypical B cells are a normal component of immune responses to vaccination and infection in humans, http://dx.doi.org/10.1101/2020.05.28.120808

Rizzetto S; Koppstein DN; Samir J; Singh M; Reed JH; Cai CH; Lloyd AR; Eltahla AA; Goodnow CC; Luciani F, B-cell receptor reconstruction from single-cell RNA-seq with VDJPuzzle, http://dx.doi.org/10.1101/181156

Louie R; Cai C; Singh M; Deveson I; Ferguson J; Amos T; McGuire H; Samir J; Gowrishankar K; Adikari T; Balderas R; Bishop D; Gottlieb D; Blyth E; Micklethwaite K; Luciani F, CAR+ and CAR- T cells differentiate into an NK-like subset that is associated with increased inflammatory cytokines following infusion, http://dx.doi.org/10.21203/rs.3.rs-1495587/v1

Singh M; Louie RHY; Samir J; Field MA; Milthorpe C; Aldiriki T; Mackie J; Roper E; Faulks M; Jackson KJL; Calcino A; Hardy MY; Blombery P; Amos TG; Deveson IW; Read SA; Shek D; Guerin A; S C; Tangye SG; Di Sabatino A; Lenti MV; Pasini A; Ciccocioppo R; Ahlenstiel G; Suan D; Tye-Din JA; Goodnow CC; Luciani F, Expanded T cell clones with lymphoma driver somatic mutations in refractory celiac disease, http://dx.doi.org/10.1101/2024.03.17.24304320

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v3

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v2

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v1

Samir J; Rizzetto S; Gupta M; Luciani F, Exploring and analysing single cell multi-omics data with VDJView, http://dx.doi.org/10.21203/rs.2.14949/v4

Ghita L; Yao Z; Xie Y; Duran V; Cagirici HB; Samir J; Osman I; Rojas OLA; Sanz AM; Sahoo MK; Robinson ML; Gelvez RM; Bueno N; Luciani F; Pinsky BA; Montoya JG; Cardenas MIE; Centeno LAV; Garrido EMR; Rosso F; Quake SR; Zanini F; Einav S, Global and cell type-specific immunological hallmarks of severe dengue progression, http://dx.doi.org/10.1101/2022.12.11.519930

Singh M; Al-Eryani G; Carswell S; Ferguson JM; Blackburn J; Barton K; Roden D; Luciani F; Phan T; Junankar S; Jackson K; Goodnow CC; Smith MA; Swarbrick A, High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes, http://dx.doi.org/10.1101/424945

Rizzetto S; Eltahla AA; Lin P; Bull R; Lloyd AR; Ho JWK; Venturi V; Luciani F, Impact of sequencing depth and read length on single cell RNA sequencing data: lessons from T cells, http://dx.doi.org/10.1101/134130

Young C; Singh M; Jackson KJ; Field MA; Peters TJ; Angioletti-Uberti S; Frenkel D; Ravishankar S; Gupta M; Wang JJ; Agapiou D; Faulks ML; Al-Eryani G; Luciani F; Gordon TP; Reed JH; Danta M; Carr A; Kelleher AD; Dore GJ; Matthews G; Brink R; Bull RA; Suan D; Goodnow CC, Self-reactive B cells traverse a perfect storm of somatic mutagenesis to cause a virus-induced autoimmune disease, http://dx.doi.org/10.1101/2024.01.07.574561

Cai C; Samir J; Pirozyan MR; Adikari TN; Gupta M; Leung P; Hughes B; Van der Byl W; Rizzetto S; Elthala A; Keoshkerian E; Palgen J-L; Peters T; Nguyen THO; Louie R; Kedzierska K; Gaudieri S; Bull RA; Lloyd AR; Luciani F, Single cell multi-omics reveals early elevated function and multiple fates within human progenitor exhausted CD8+ T cells, http://dx.doi.org/10.1101/2021.09.09.459584

Walker MR; Leung P; Keoshkerian E; Pirozyan MR; Lloyd AR; Luciani F; Bull RA, Temporal dynamics of viral fitness and the adaptive immune response in HCV infection, http://dx.doi.org/10.1101/2024.09.07.611784

Back to profile page