Select Publications

Preprints

Minoche AE; Lundie B; Peters GB; Ohnesorg T; Pinese M; Thomas DM; Zankl A; Roscioli T; Schonrock N; Kummerfeld S; Burnett L; Dinger ME; Cowley MJ, ClinSV: Clinical grade structural and copy number variant detection from whole genome sequencing data, http://dx.doi.org/10.1101/2020.06.30.20143453

Zammit NW; Gray PE; Siggs OM; Yap JY; Russell A; Cultrone D; Warren J; Walters SN; Brink R; Zahra D; Burnett DL; Gayevskiy V; Minoche AE; Ziegler JB; Craig ME; Wong M; Benitez-Aguirre P; Teo J; Cowley MJ; Dinger ME; Tangye SG; Burke C; Phan TG; Goodnow CC; Grey ST, Environmental and genetic disease modifiers of haploinsufficiency of A20, http://dx.doi.org/10.1101/2022.03.19.485004

Ross SE; Vázquez-Marín J; Gert KRB; González-Rajal Á; Dinger ME; Pauli A; Martínez-Morales JR; Bogdanovic O, Evolutionary conservation of embryonic DNA methylome remodelling in distantly related teleost species, http://dx.doi.org/10.1101/2023.05.24.542066

Su Z; Fang M; Smolnikov A; Vafaee F; Dinger ME; Oates EC, Genes in Humans and Mice: Insights from Deep learning of 777K Bulk Transcriptomes, http://dx.doi.org/10.1101/2024.04.01.587517

Gloss BS; Signal B; Cheetham SW; Gruhl F; Kaczorowski D; Perkins AC; Dinger ME, High temporal resolution of gene expression dynamics in developing mouse embryonic stem cells, http://dx.doi.org/10.1101/084442

Martinez CDP; Zeraati ; Rouet R; Mazigi O; Gloss B; Chan C-L; Bryan TM; Smith NM; Dinger ME; Kummerfeld S; Christ D, Human genomic DNA is widely interspersed with i-motif structures, http://dx.doi.org/10.1101/2022.04.14.488274

Puttick C; Kumar KR; Davis RL; Pinese M; Thomas DM; Dinger ME; Sue CM; Cowley MJ, mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data, http://dx.doi.org/10.1101/852210

Su Z; Fang M; Smolnikov A; Dinger ME; Oates EC; Vafaee F, Multifaceted Representation of Genes via Deep Learning of Gene Expression Networks, http://dx.doi.org/10.1101/2024.03.07.583777

Ross SE; Holliday H; Wang E; Zeraati M; Tsoli M; Ziegler DS; Dinger ME, RNA N6-Methyladenosine (m6A) regulates the cell cycle in Diffuse Midline Glioma (DMG) and confers sensitivity to FTO inhibition, http://dx.doi.org/10.21203/rs.3.rs-5390888/v1

Hoang VL; Tom LN; Quek X-C; Tan J-M; Payne EJ; Lin LL; Sinnya S; Raphael AP; Lambie D; Frazer IH; Dinger ME; Soyer HP; Prow TW, RNA-seq reveals more consistent reference genes for gene expression studies in human non-melanoma skin cancers, http://dx.doi.org/10.7287/peerj.preprints.2331

Lacaze P; Pinese M; Kaplan W; Stone A; Brion M-J; Woods RL; McNamara M; McNeil JJ; Dinger ME; Thomas DM, The Medical Genome Reference Bank: a whole-genome data resource of 4,000 healthy elderly individuals. Rationale and cohort design, http://dx.doi.org/10.1101/274019

Deveson IW; Brunck ME; Blackburn J; Tseng E; Hon T; Clark TA; Clark MB; Crawford J; Dinger ME; Nielsen LK; Mattick JS; Mercer TR, Universal alternative splicing of noncoding exons, http://dx.doi.org/10.1101/136275

Other

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Data from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.c.6540525.v1

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Data from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.c.6540525

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Supplemental Files from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.22513437.v1

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Supplemental Files from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.22513437

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Supplementary Data from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.22513434

Tousignant KD; Rockstroh A; Taherian Fard A; Lehman ML; Wang C; McPherson SJ; Philp LK; Bartonicek N; Dinger ME; Nelson CC; Sadowski MC, 2023, Supplementary Data from Lipid Uptake Is an Androgen-Enhanced Lipid Supply Pathway Associated with Prostate Cancer Disease Progression and Bone Metastasis, http://dx.doi.org/10.1158/1541-7786.22513434.v1

Palmer EE; Hong S; Al Zahrani F; Hashem MO; Aleisa FA; Jalal Ahmed HM; Kandula T; Macintosh R; Minoche AE; Puttick C; Gayevskiy V; Drew AP; Cowley MJ; Dinger M; Rosenfeld JA; Xiao R; Cho MT; Yakubu SF; Henderson LB; Guillen Sacoto MJ; Begtrup A; Hamad M; Shinawi M; Andrews MV; Jones MC; Lindstrom K; Bristol RE; Kayani S; Snyder M; Villanueva MM; Schteinschnaider A; Faivre L; Thauvin C; Vitobello A; Roscioli T; Kirk EP; Bye A; Merzaban J; Jaremko Ł; Jaremko M; Sachdev RK; Alkuraya FS; Arold ST; Palmer E, 2019, Erratum: De Novo Variants Disrupting the HX Repeat Motif of ATN1 Cause a Recognizable Non-progressive Neurocognitive Syndrome (The American Journal of Human Genetics (2019) 104(3) (542–552), (S0002929719300138), (10.1016/j.ajhg.2019.01.013)), Elsevier, http://dx.doi.org/10.1016/j.ajhg.2019.03.016


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