Select Publications
Journal articles
2023, 'Respiratory infections and type 1 diabetes: Potential roles in pathogenesis', Reviews in Medical Virology, 33, http://dx.doi.org/10.1002/rmv.2429
,2023, 'High activation levels maintained in receptor-binding domain–specific memory B cells in people with severe coronavirus disease 2019', Immunology and Cell Biology, 101, pp. 142 - 155, http://dx.doi.org/10.1111/imcb.12607
,2023, 'Persistence of a Frameshifting Deletion in SARS-CoV-2 ORF7a for the Duration of a Major Outbreak', Viruses, 15, http://dx.doi.org/10.3390/v15020522
,2023, 'Bioinformatic investigation of discordant sequence data for SARS-CoV-2: insights for robust genomic analysis during pandemic surveillance', Microbial Genomics, 9, http://dx.doi.org/10.1099/mgen.0.001146
,2023, 'Fatal Human Neurologic Infection Caused by Pigeon Avian Paramyxovirus-1, Australia', Emerging Infectious Diseases, 29, pp. 2482 - 2487, http://dx.doi.org/10.3201/eid2912.230250
,2023, 'Protocol for a nested case-control study design for omics investigations in the Environmental Determinants of Islet Autoimmunity cohort', Annals of Medicine, 55, http://dx.doi.org/10.1080/07853890.2023.2198255
,2022, 'Global disparities in SARS-CoV-2 genomic surveillance', Nature Communications, 13, http://dx.doi.org/10.1038/s41467-022-33713-y
,2022, 'Simultaneous monitoring of eight human respiratory viruses including SARS-CoV-2 using liquid chromatography-tandem mass spectrometry', Scientific Reports, 12, http://dx.doi.org/10.1038/s41598-022-16250-y
,2022, 'Hepatitis C Virus Reinfection Following Direct-Acting Antiviral Treatment in the Prison Setting: The SToP-C Study', Clinical Infectious Diseases, 75, pp. 1809 - 1819, http://dx.doi.org/10.1093/cid/ciac246
,2022, 'Australian Paediatric Surveillance Unit (APSU) Annual Surveillance Report 2021', Communicable diseases intelligence (2018), 46, http://dx.doi.org/10.33321/cdi.2022.46.66
,2022, 'Longitudinal Characterization of Phagocytic and Neutralization Functions of Anti-Spike Antibodies in Plasma of Patients after Severe Acute Respiratory Syndrome Coronavirus 2 Infection', Journal of Immunology, 209, pp. 1499 - 1512, http://dx.doi.org/10.4049/jimmunol.2200272
,2022, 'Cadaveric donor specimens and serological testing for SARS-CoV-2', Pathology, 54, pp. 797 - 800, http://dx.doi.org/10.1016/j.pathol.2022.05.005
,2022, 'Circulation of enterovirus D68 (EV-D68) causing respiratory illness in New South Wales, Australia, between August 2018 and November 2019', Pathology, 54, pp. 784 - 789, http://dx.doi.org/10.1016/j.pathol.2022.03.007
,2022, 'Highly Conserved Interaction Profiles between Clinically Relevant Mutants of the Cytomegalovirus CDK-like Kinase pUL97 and Human Cyclins: Functional Significance of Cyclin H', International Journal of Molecular Sciences, 23, http://dx.doi.org/10.3390/ijms231911814
,2022, 'Molecular typing of enteroviruses: comparing 5′UTR, VP1 and whole genome sequencing methods', Pathology, 54, pp. 779 - 783, http://dx.doi.org/10.1016/j.pathol.2022.03.013
,2022, 'SARS-CoV-2 Omicron BA.5: Evolving tropism and evasion of potent humoral responses and resistance to clinical immunotherapeutics relative to viral variants of concern', eBioMedicine, 84, http://dx.doi.org/10.1016/j.ebiom.2022.104270
,2022, 'Detection of respiratory viruses directly from clinical samples using next-generation sequencing: A literature review of recent advances and potential for routine clinical use', Reviews in Medical Virology, 32, http://dx.doi.org/10.1002/rmv.2375
,2022, 'eLearning significantly improves midwives' knowledge of the congenital cytomegalovirus prevention guidelines', WOMEN AND BIRTH, 35, pp. S23 - S23, http://dx.doi.org/10.1016/j.wombi.2022.07.063
,2022, 'Evolution of the SARS-CoV-2 omicron variants BA.1 to BA.5: Implications for immune escape and transmission', Reviews in Medical Virology, 32, http://dx.doi.org/10.1002/rmv.2381
,2022, 'Persistent high-level shedding of cultivable SARS-CoV-2 Delta virus 33 days after onset of COVID-19 in a hospitalized patient with pneumonia', Journal of Medical Virology, 94, pp. 4043 - 4046, http://dx.doi.org/10.1002/jmv.27832
,2022, 'Notifiable Infectious Diseases Among Organ Transplant Recipients: A Data-Linked Cohort Study, 2000-2015', Open Forum Infectious Diseases, 9, http://dx.doi.org/10.1093/ofid/ofac337
,2022, 'Proficiency testing for SARS-CoV-2 whole genome sequencing', Pathology, 54, pp. 615 - 622, http://dx.doi.org/10.1016/j.pathol.2022.04.002
,2022, 'Detection of Ganciclovir-Resistant Cytomegalovirus in a Prospective Cohort of Kidney Transplant Recipients Receiving Subtherapeutic Valganciclovir Prophylaxis', Microbiology Spectrum, 10, http://dx.doi.org/10.1128/spectrum.02684-21
,2022, 'eLearning significantly improves maternity professionals’ knowledge of the congenital cytomegalovirus prevention guidelines', Australian and New Zealand Journal of Obstetrics and Gynaecology, 62, pp. 445 - 452, http://dx.doi.org/10.1111/ajo.13500
,2022, 'Platform for isolation and characterization of SARS-CoV-2 variants enables rapid characterization of Omicron in Australia', Nature Microbiology, 7, pp. 896 - 908, http://dx.doi.org/10.1038/s41564-022-01135-7
,2022, 'Proficiency testing for SARS-CoV-2 in assuring the quality and overall performance in viral RNA detection in clinical and public health laboratories', Pathology, 54, pp. 472 - 478, http://dx.doi.org/10.1016/j.pathol.2022.01.006
,2022, 'SARS-CoV-2 N-gene mutation leading to Xpert Xpress SARS-CoV-2 assay instability', Pathology, 54, pp. 499 - 501, http://dx.doi.org/10.1016/j.pathol.2022.02.001
,2022, 'Maintenance of broad neutralizing antibodies and memory B cells 1 year post-infection is predicted by SARS-CoV-2-specific CD4+ T cell responses', Cell Reports, 38, pp. 110345, http://dx.doi.org/10.1016/j.celrep.2022.110345
,2022, 'Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia', Viruses, 14, http://dx.doi.org/10.3390/v14020185
,2022, 'Characteristics and Donation Outcomes of Potential Organ Donors Perceived to Be at Increased Risk for Blood-borne Virus Transmission: An Australian cohort study 2010–2018', Transplantation, 106, pp. 348 - 357, http://dx.doi.org/10.1097/TP.0000000000003715
,2022, 'Comparison of Strongyloides-specific IgG enzyme immunoassays for laboratory detection of Strongyloides stercoralis infection', Pathology, 54, pp. 127 - 129, http://dx.doi.org/10.1016/j.pathol.2021.03.002
,2022, 'RSV Epidemiology in Australia Before and During COVID-19', Pediatrics, 149, http://dx.doi.org/10.1542/peds.2021-053537
,2022, 'Transplacental transfer of RSV antibody in Australian First Nations infants', Journal of Medical Virology, 94, pp. 782 - 786, http://dx.doi.org/10.1002/jmv.27383
,2022, 'Viruses associated with acute respiratory infection in a community-based cohort of healthy New Zealand children', Journal of Medical Virology, 94, pp. 454 - 460, http://dx.doi.org/10.1002/jmv.25493
,2022, 'Women with type 1 diabetes exhibit a progressive increase in gut Saccharomyces cerevisiae in pregnancy associated with evidence of gut inflammation', Diabetes Research and Clinical Practice, 184, http://dx.doi.org/10.1016/j.diabres.2022.109189
,2021, 'Immunizations with diverse sarbecovirus receptor-binding domains elicit SARS-CoV-2 neutralizing antibodies against a conserved site of vulnerability', Immunity, 54, pp. 2908 - 2921.e6, http://dx.doi.org/10.1016/j.immuni.2021.10.019
,2021, 'Chimeric synthetic reference standards enable cross-validation of positive and negative controls in SARS-CoV-2 molecular tests', Scientific Reports, 11, http://dx.doi.org/10.1038/s41598-021-81760-0
,2021, 'Development of a PROTAC-based targeting strategy provides a mechanistically unique mode of anti-cytomegalovirus activity', International Journal of Molecular Sciences, 22, http://dx.doi.org/10.3390/ijms222312858
,2021, 'Differences in antibiotic and antiviral use in people with confirmed influenza: a retrospective comparison of rapid influenza PCR and multiplex respiratory virus PCR tests', BMC Infectious Diseases, 21, http://dx.doi.org/10.1186/s12879-021-06030-w
,2021, 'Proficiency testing for bacterial whole genome sequencing in assuring the quality of microbiology diagnostics in clinical and public health laboratories', Pathology, 53, pp. 902 - 911, http://dx.doi.org/10.1016/j.pathol.2021.03.012
,2021, 'Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing', Scientific Reports, 11, pp. 3934, http://dx.doi.org/10.1038/s41598-021-83642-x
,2021, 'Serological Detection of SARS-CoV-2 IgG Using Commercially Available Enzyme Immunoassays on Dried Blood Spots Collected from Patients', Microbiology Spectrum, 9, http://dx.doi.org/10.1128/Spectrum.01245-21
,2021, 'Type 1 diabetes in pregnancy is associated with distinct changes in the composition and function of the gut microbiome', Microbiome, 9, http://dx.doi.org/10.1186/s40168-021-01104-y
,2021, 'Evaluation of protocol amendments to the Environmental Determinants of Islet Autoimmunity (ENDIA) study during the COVID-19 pandemic', Diabetic Medicine, 38, http://dx.doi.org/10.1111/dme.14638
,2021, 'Receptors in host pathogen interactions between human cytomegalovirus and the placenta during congenital infection', Reviews in Medical Virology, 31, http://dx.doi.org/10.1002/rmv.2233
,2021, 'Review of studies of severe acute respiratory syndrome related coronavirus–2 pathogenesis in human organoid models', Reviews in Medical Virology, 31, http://dx.doi.org/10.1002/rmv.2227
,2021, 'Australian Paediatric Surveillance Unit (APSU) Annual Surveillance Report 2020', Communicable diseases intelligence (2018), 45, http://dx.doi.org/10.33321/cdi.2021.45.59
,2021, 'A portable rt-lamp/crispr machine for rapid covid-19 screening', Biosensors, 11, http://dx.doi.org/10.3390/bios11100369
,2021, 'Seroprevalence of hepatitis B antibodies among international and domestic university students', Journal of Viral Hepatitis, 28, pp. 1400 - 1412, http://dx.doi.org/10.1111/jvh.13580
,2021, 'Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2 with grinch', Wellcome Open Research, 6, pp. 121 - 121, http://dx.doi.org/10.12688/wellcomeopenres.16661.2
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