Select Publications

Journal articles

Egilmezer E; Hamilton ST; Foster CSP; Marschall M; Rawlinson WD, 2024, 'Human cytomegalovirus (CMV) dysregulates neurodevelopmental pathways in cerebral organoids', Communications Biology, 7, http://dx.doi.org/10.1038/s42003-024-05923-1

Hamilton ST; Loo C; Weber MA; John R; Shand A; Rawlinson WD, 2024, 'SARS-CoV-2 infection of the placenta is associated with extensive fibrin deposition which may cause adverse pregnancy outcomes', Pathology, 56, pp. 437 - 441, http://dx.doi.org/10.1016/j.pathol.2023.06.016

Walker G; Rawlinson W, 2024, 'Contextualising COVID-19 in 2024', Microbiology Australia, 45, pp. 3, http://dx.doi.org/10.1071/MA24002

Marinelli T; Masters J; Buckland ME; Lee M; Rawlinson W; Kim KW; Urriola N; van Hal S, 2024, 'Chronic and neurotropic: A paradigm-challenging case of dengue virus encephalitis in patient with advanced human immunodeficiency virus infection.', Clin Infect Dis, http://dx.doi.org/10.1093/cid/ciae061

Walker GJ; Foster CSP; Sevendal A; Domazetovska A; Kamalakkannan A; Williams PCM; Kim KW; Condylios A; Stelzer-Braid S; Bartlett AW; Rawlinson W, 2024, 'Clinical, Genomic, and Immunological Characterization of RSV Surge in Sydney, Australia, 2022', Pediatrics, 153, http://dx.doi.org/10.1542/peds.2023-063667

Lau KA; Foster CSP; Theis T; Draper J; Sullivan MJ; Ballard S; Rawlinson WD, 2024, 'Continued improvement in the development of the SARS-CoV-2 whole genome sequencing proficiency testing program', Pathology, http://dx.doi.org/10.1016/j.pathol.2024.02.010

Grosse SD; Fleming P; Pesch MH; Rawlinson WD, 2024, 'Estimates of congenital cytomegalovirus-attributable infant mortality in high-income countries: A review', Reviews in Medical Virology, 34, http://dx.doi.org/10.1002/rmv.2502

Wang X; Kim KW; Walker G; Stelzer-Braid S; Scotch M; Rawlinson WD, 2024, 'Genome characterization of influenza A and B viruses in New South Wales, Australia, in 2019: A retrospective study using high-throughput whole genome sequencing', Influenza and other Respiratory Viruses, 18, http://dx.doi.org/10.1111/irv.13252

Dyda A; Broome A; Rawlinson W; Mahimbo A; Saha A; Kefalas B; Seale H; Macintyre CR; Zwar N; Gidding HF; Heywood AE, 2024, 'Measles, mumps, rubella and varicella antibodies among international and domestic university students', Journal of Travel Medicine, 31, http://dx.doi.org/10.1093/jtm/taae004

Hurley S; Kim KW; Domazetovska A; Yau C; Yeang M; Donovan L; Kok J; Rawlinson W, 2024, 'Mpox detection in clinical specimens by three commercial real-time PCR assays demonstrates comparable results', Pathology, http://dx.doi.org/10.1016/j.pathol.2023.11.010

Rouet R; Henry JY; Johansen MD; Sobti M; Balachandran H; Langley DB; Walker GJ; Lenthall H; Jackson J; Ubiparipovic S; Mazigi O; Schofield P; Burnett DL; Brown SHJ; Martinello M; Hudson B; Gilroy N; Post JJ; Kelleher A; Jäck HM; Goodnow CC; Turville SG; Rawlinson WD; Bull RA; Stewart AG; Hansbro PM; Christ D, 2023, 'Broadly neutralizing SARS-CoV-2 antibodies through epitope-based selection from convalescent patients', Nature Communications, 14, http://dx.doi.org/10.1038/s41467-023-36295-5

Wong DD; Ho SA; Domazetovska A; Yong MK; Rawlinson WD, 2023, 'Evidence supporting the use of therapeutic drug monitoring of ganciclovir in transplantation', Current Opinion in Infectious Diseases, 36, pp. 505 - 513, http://dx.doi.org/10.1097/QCO.0000000000000965

Halley C; Honeywill C; Kang J; Pierse N; Robertson O; Rawlinson W; Stelzer-Braid S; Willink R; Crane J, 2023, 'Preventing upper respiratory tract infections with prophylactic nasal carrageenan: a feasibility study', Future Microbiology, 18, pp. 1319 - 1328, http://dx.doi.org/10.2217/fmb-2021-0122

Boppana SB; van Boven M; Britt WJ; Gantt S; Griffiths PD; Grosse SD; Hyde TB; Lanzieri TM; Mussi-Pinhata MM; Pallas SE; Pinninti SG; Rawlinson WD; Ross SA; Vossen ACTM; Fowler KB, 2023, 'Vaccine value profile for cytomegalovirus', Vaccine, 41, pp. S53 - S75, http://dx.doi.org/10.1016/j.vaccine.2023.06.020

Schütz M; Wangen C; Sommerer M; Kögler M; Eickhoff J; Degenhart C; Klebl B; Naing Z; Egilmezer E; Hamilton ST; Rawlinson WD; Sticht H; Marschall M, 2023, 'Cytomegalovirus cyclin-dependent kinase ortholog vCDK/pUL97 undergoes regulatory interaction with human cyclin H and CDK7 to codetermine viral replication efficiency', Virus Research, 335, http://dx.doi.org/10.1016/j.virusres.2023.199200

Harrison LC; Bandala-Sanchez E; Oakey H; Colman PG; Watson K; Kim KW; Wu R; Hamilton-Williams EE; Stone NL; Haynes A; Thomson RL; Vuillermin PJ; Soldatos G; Rawlinson WD; McGorm KJ; Morahan G; Barry SC; Sinnott RO; Wentworth JM; Couper JJ; Penno MAS, 2023, 'A surge in serum mucosal cytokines associated with seroconversion in children at risk for type 1 diabetes', Journal of Diabetes Investigation, 14, pp. 1092 - 1100, http://dx.doi.org/10.1111/jdi.14031

Bowden-Reid E; Ledger S; Zhang Y; Di Giallonardo F; Aggarwal A; Stella AO; Akerman A; Milogiannakis V; Walker G; Rawlinson W; Turville S; Kelleher AD; Ahlenstiel C, 2023, 'Novel siRNA therapeutics demonstrate multi-variant efficacy against SARS-CoV-2', Antiviral Research, 217, http://dx.doi.org/10.1016/j.antiviral.2023.105677

Barrios MH; Nicholson S; Bull RA; Martinello M; Rawlinson W; Mina M; Post JJ; Hudson B; Gilroy N; Lloyd AR; Konecny P; Mordant F; Catton M; Subbarao K; Caly L; Druce J; Netter HJ, 2023, 'Comparative Longitudinal Serological Study of Anti-SARS-CoV-2 Antibody Profiles in People with COVID-19', Microorganisms, 11, http://dx.doi.org/10.3390/microorganisms11081985

Isaacs SR; Roy A; Dance B; Ward EJ; Foskett DB; Maxwell AJ; Rawlinson WD; Kim KW; Craig ME, 2023, 'Enteroviruses and risk of islet autoimmunity or type 1 diabetes: systematic review and meta-analysis of controlled observational studies detecting viral nucleic acids and proteins', The Lancet Diabetes and Endocrinology, 11, pp. 578 - 592, http://dx.doi.org/10.1016/S2213-8587(23)00122-5

Bennett D; Chen X; Walker GJ; Mehdipour M; Stelzer-Braid S; Rawlinson WD; Hibbert DB; Tilley RD; Gooding JJ, 2023, 'Erratum: Machine Learning Color Feature Analysis of a High Throughput Nanoparticle Conjugate Sensing Assay (Analytical Chemistry (2023) 95:6 (550-6558) DOI: 10.1021/acs.analchem.2c05292)', Analytical Chemistry, 95, pp. 8393, http://dx.doi.org/10.1021/acs.analchem.3c01892

Bennett D; Chen X; Walker GJ; Stelzer-Braid S; Rawlinson WD; Hibbert DB; Tilley RD; Gooding JJ, 2023, 'Machine Learning Color Feature Analysis of a High Throughput Nanoparticle Conjugate Sensing Assay', Analytical Chemistry, 95, pp. 6550 - 6558, http://dx.doi.org/10.1021/acs.analchem.2c05292

Akerman A; Milogiannakis V; Jean T; Esneau C; Silva MR; Ison T; Fichter C; Lopez JA; Chandra D; Naing Z; Caguicla J; Li D; Walker G; Amatayakul-Chantler S; Roth N; Manni S; Hauser T; Barnes T; Condylios A; Yeang M; Wong M; Foster CSP; Sato K; Lee S; Song Y; Mao L; Sigmund A; Phu A; Vande More AM; Hunt S; Douglas M; Caterson I; Britton W; Sandgren K; Bull R; Lloyd A; Triccas J; Tangye S; Bartlett NW; Darley D; Matthews G; Stark DJ; Petoumenos K; Rawlinson WD; Murrell B; Brilot F; Cunningham AL; Kelleher AD; Aggarwal A; Turville SG, 2023, 'Emergence and antibody evasion of BQ, BA.2.75 and SARS-CoV-2 recombinant sub-lineages in the face of maturing antibody breadth at the population level', eBioMedicine, 90, http://dx.doi.org/10.1016/j.ebiom.2023.104545

Wu R; Mumtaz M; Maxwell AJ; Isaacs SR; Laiho JE; Rawlinson WD; Hyöty H; Craig ME; Kim KW, 2023, 'Respiratory infections and type 1 diabetes: Potential roles in pathogenesis', Reviews in Medical Virology, 33, http://dx.doi.org/10.1002/rmv.2429

Gupta M; Balachandran H; Louie RHY; Li H; Agapiou D; Keoshkerian E; Christ D; Rawlinson W; Mina MM; Post JJ; Hudson B; Gilroy N; Konecny P; Bartlett AW; Sasson SC; Ahlenstiel G; Dwyer D; Lloyd AR; Martinello M; Luciani F; Bull RA, 2023, 'High activation levels maintained in receptor-binding domain–specific memory B cells in people with severe coronavirus disease 2019', Immunology and Cell Biology, 101, pp. 142 - 155, http://dx.doi.org/10.1111/imcb.12607

Foster CSP; Bull RA; Tedla N; Santiago F; Agapiou D; Adhikari A; Walker GJ; Shrestha LB; Van Hal SJ; Kim KW; Rawlinson WD, 2023, 'Persistence of a Frameshifting Deletion in SARS-CoV-2 ORF7a for the Duration of a Major Outbreak', Viruses, 15, http://dx.doi.org/10.3390/v15020522

Zufan SE; Lau KA; Donald A; Hoang T; Foster CSP; Sikazwe C; Theis T; Rawlinson WD; Ballard SA; Stinear TP; Howden BP; Jennison AV; Seemann T, 2023, 'Bioinformatic investigation of discordant sequence data for SARS-CoV-2: insights for robust genomic analysis during pandemic surveillance', Microbial Genomics, 9, http://dx.doi.org/10.1099/mgen.0.001146

Hurley S; Eden JS; Bingham J; Rodriguez M; Neave MJ; Johnson A; Howard-Jones AR; Kok J; Anazodo A; McMullan B; Williams DT; Watson J; Solinas A; Kim KW; Rawlinson W, 2023, 'Fatal Human Neurologic Infection Caused by Pigeon Avian Paramyxovirus-1, Australia', Emerging Infectious Diseases, 29, pp. 2482 - 2487, http://dx.doi.org/10.3201/eid2912.230250

Oakey H; Giles LC; Thomson RL; Lê Cao KA; Ashwood P; Brown JD; Knight EJ; Barry SC; Craig ME; Colman PG; Davis EA; Hamilton-Williams EE; Harrison LC; Haynes A; Kim KW; Mallitt KA; McGorm K; Morahan G; Rawlinson WD; Sinnott RO; Soldatos G; Wentworth JM; Couper JJ; Penno MAS, 2023, 'Protocol for a nested case-control study design for omics investigations in the Environmental Determinants of Islet Autoimmunity cohort', Annals of Medicine, 55, http://dx.doi.org/10.1080/07853890.2023.2198255

Brito AF; Semenova E; Dudas G; Hassler GW; Kalinich CC; Kraemer MUG; Ho J; Tegally H; Githinji G; Agoti CN; Matkin LE; Whittaker C; Kantardjiev T; Korsun N; Stoitsova S; Dimitrova R; Trifonova I; Dobrinov V; Grigorova L; Stoykov I; Grigorova I; Gancheva A; Jennison A; Leong L; Speers D; Baird R; Cooley L; Kennedy K; de Ligt J; Rawlinson W; van Hal S; Williamson D; Singh R; Nathaniel-Girdharrie SM; Edghill L; Indar L; St. John J; Gonzalez-Escobar G; Ramkisoon V; Brown-Jordan A; Ramjag A; Mohammed N; Foster JE; Potter I; Greenaway-Duberry S; George K; Belmar-George S; Lee J; Bisasor-McKenzie J; Astwood N; Sealey-Thomas R; Laws H; Singh N; Oyinloye A; McMillan P; Hinds A; Nandram N; Parasram R; Khan-Mohammed Z; Charles S; Andrewin A; Johnson D; Keizer-Beache S; Oura C; Pybus OG; Faria NR; Stegger M; Albertsen M; Fomsgaard A; Rasmussen M; Khouri R; Naveca F; Graf T; Miyajima F; Wallau G; Motta F; Khare S; Freitas L; Schiavina C; Bach G; Schultz MB; Chew YH; Makheja M; Born P; Calegario G; Romano S; Finello J; Diallo A; Lee RTC; Xu YN; Yeo W; Tiruvayipati S; Yadahalli S; Wilkinson E; Iranzadeh A; Giandhari J; Doolabh D; Pillay S; Ramphal U; San JE, 2022, 'Global disparities in SARS-CoV-2 genomic surveillance', Nature Communications, 13, http://dx.doi.org/10.1038/s41467-022-33713-y

Hodgkins C; Buckton LK; Walker GJ; Crossett B; Cordwell SJ; Horvath AR; Rawlinson WD, 2022, 'Simultaneous monitoring of eight human respiratory viruses including SARS-CoV-2 using liquid chromatography-tandem mass spectrometry', Scientific Reports, 12, http://dx.doi.org/10.1038/s41598-022-16250-y

Carson JM; Dore GJ; Lloyd AR; Grebely J; Byrne M; Cunningham E; Amin J; Vickerman P; Martin NK; Treloar C; Martinello M; Matthews GV; Hajarizadeh B, 2022, 'Hepatitis C Virus Reinfection Following Direct-Acting Antiviral Treatment in the Prison Setting: The SToP-C Study', Clinical Infectious Diseases, 75, pp. 1809 - 1819, http://dx.doi.org/10.1093/cid/ciac246

Teutsch SM; Nunez CA; Morris A; Eslick GD; Berkhout A; Novakovic D; Brotherton JM; McGregor S; Khawar L; Khandaker G; Booy R; Jones CA; Rawlinson W; Thorley BR; Elliott EJ, 2022, 'Australian Paediatric Surveillance Unit (APSU) Annual Surveillance Report 2021', Communicable diseases intelligence (2018), 46, http://dx.doi.org/10.33321/cdi.2022.46.66

Adhikari A; Abayasingam A; Rodrigo C; Agapiou D; Pandzic E; Brasher NA; Fernando BSM; Keoshkerian E; Li H; Kim HN; Lord M; Popovic G; Rawlinson W; Mina M; Post JJ; Hudson B; Gilroy N; Dwyer D; Sasson SC; Grubor-Bauk B; Lloyd AR; Martinello M; Bull RA; Tedla N; Kaldor J; Dore G; Sorrell T; Bartlett A; Lemberg D; Di Girolamo N; Byrne M; Hammoud M; Sultan R; Konecny P; Matthews G; Shek D; Holdaway S; Mitsa-Kos K; How-Chow D; Lagunday R; Robinson S; Terrill L; Joshi N; Li Y; Gill S; Sevehon A, 2022, 'Longitudinal Characterization of Phagocytic and Neutralization Functions of Anti-Spike Antibodies in Plasma of Patients after Severe Acute Respiratory Syndrome Coronavirus 2 Infection', Journal of Immunology, 209, pp. 1499 - 1512, http://dx.doi.org/10.4049/jimmunol.2200272

Yeang M; Ramachandran V; Naing Z; Kok CC; Rawlinson WD, 2022, 'Cadaveric donor specimens and serological testing for SARS-CoV-2', Pathology, 54, pp. 797 - 800, http://dx.doi.org/10.1016/j.pathol.2022.05.005

Stelzer-Braid S; Yeang M; Britton PN; Kim KW; Varadhan H; Andrews PI; Briest R; Branley J; Balgahom R; Burrell R; Gehrig N; Newcombe J; Kesson A; Kok J; Maley M; Van Hal S; MacIntyre CR; Craig ME; Ferson MJ; Rawlinson WD, 2022, 'Circulation of enterovirus D68 (EV-D68) causing respiratory illness in New South Wales, Australia, between August 2018 and November 2019', Pathology, 54, pp. 784 - 789, http://dx.doi.org/10.1016/j.pathol.2022.03.007

Schütz M; Müller R; Socher E; Wangen C; Full F; Wyler E; Wong D; Scherer M; Stamminger T; Chou S; Rawlinson WD; Hamilton ST; Sticht H; Marschall M, 2022, 'Highly Conserved Interaction Profiles between Clinically Relevant Mutants of the Cytomegalovirus CDK-like Kinase pUL97 and Human Cyclins: Functional Significance of Cyclin H', International Journal of Molecular Sciences, 23, http://dx.doi.org/10.3390/ijms231911814

Aggarwal A; Akerman A; Milogiannakis V; Silva MR; Walker G; Stella AO; Kindinger A; Angelovich T; Waring E; Amatayakul-Chantler S; Roth N; Manni S; Hauser T; Barnes T; Condylios A; Yeang M; Wong M; Jean T; Foster CSP; Christ D; Hoppe AC; Munier ML; Darley D; Churchill M; Stark DJ; Matthews G; Rawlinson WD; Kelleher AD; Turville SG, 2022, 'SARS-CoV-2 Omicron BA.5: Evolving tropism and evasion of potent humoral responses and resistance to clinical immunotherapeutics relative to viral variants of concern', eBioMedicine, 84, http://dx.doi.org/10.1016/j.ebiom.2022.104270

Wang X; Stelzer-Braid S; Scotch M; Rawlinson WD, 2022, 'Detection of respiratory viruses directly from clinical samples using next-generation sequencing: A literature review of recent advances and potential for routine clinical use', Reviews in Medical Virology, 32, http://dx.doi.org/10.1002/rmv.2375

Swinburn K; Sheedy HS; Waight E; King R; Hall B; Hui L; Jones C; Daly K; Rawlinson W; McIntyre S; Webb A; Badawi N; Bowen A; Britton P; Palasanthiran P; Lainchbury A; Shand A, 2022, 'eLearning significantly improves midwives' knowledge of the congenital cytomegalovirus prevention guidelines', WOMEN AND BIRTH, 35, pp. S23 - S23, http://dx.doi.org/10.1016/j.wombi.2022.07.063

Kim KW; Wang X; Adhikari A; Yeang M; Jenkins F; Naing Z; Walker GJ; Foster CSP; Stelzer-Braid S; Deveson I; Craig ME; Tedla N; Bull RA; Martinello M; Pinto AN; Chan R; Turville S; Rawlinson WD; van Hal S, 2022, 'Persistent high-level shedding of cultivable SARS-CoV-2 Delta virus 33 days after onset of COVID-19 in a hospitalized patient with pneumonia', Journal of Medical Virology, 94, pp. 4043 - 4046, http://dx.doi.org/10.1002/jmv.27832

Waller KMJ; De La Mata NL; Wyburn KR; Hedley JA; Rosales BM; Kelly PJ; Ramachandran V; Shah KK; Morton RL; Rawlinson WD; Webster AC, 2022, 'Notifiable Infectious Diseases Among Organ Transplant Recipients: A Data-Linked Cohort Study, 2000-2015', Open Forum Infectious Diseases, 9, http://dx.doi.org/10.1093/ofid/ofac337

Lau KA; Horan K; Gonçalves da Silva A; Kaufer A; Theis T; Ballard SA; Rawlinson WD, 2022, 'Proficiency testing for SARS-CoV-2 whole genome sequencing', Pathology, 54, pp. 615 - 622, http://dx.doi.org/10.1016/j.pathol.2022.04.002

Wong DD; van Zuylen WJ; Novos T; Stocker S; Reuter SE; Au J; Foster CSP; Day RO; Horvath AR; Endre Z; Rawlinson WD, 2022, 'Detection of Ganciclovir-Resistant Cytomegalovirus in a Prospective Cohort of Kidney Transplant Recipients Receiving Subtherapeutic Valganciclovir Prophylaxis', Microbiology Spectrum, 10, http://dx.doi.org/10.1128/spectrum.02684-21

Smithers-Sheedy H; Swinburn K; Waight E; King R; Hui L; Jones CA; Daly K; Rawlinson W; Mcintyre S; Webb A; Badawi N; Bowen A; Britton PN; Palasanthiran P; Lainchbury A; Shand A, 2022, 'eLearning significantly improves maternity professionals’ knowledge of the congenital cytomegalovirus prevention guidelines', Australian and New Zealand Journal of Obstetrics and Gynaecology, 62, pp. 445 - 452, http://dx.doi.org/10.1111/ajo.13500

Aggarwal A; Stella AO; Walker G; Akerman A; Esneau C; Milogiannakis V; Burnett DL; McAllery S; Silva MR; Lu Y; Foster CSP; Brilot F; Pillay A; Van Hal S; Mathivanan V; Fichter C; Kindinger A; Hoppe AC; Munier ML; Amatayakul-Chantler S; Roth N; Coppola G; Symonds GP; Schofield P; Jackson J; Lenthall H; Henry JY; Mazigi O; Jäck HM; Davenport MP; Darley DR; Matthews GV; Khoury DS; Cromer D; Goodnow CC; Christ D; Robosa R; Starck DJ; Bartlett NW; Rawlinson WD; Kelleher AD; Turville SG, 2022, 'Platform for isolation and characterization of SARS-CoV-2 variants enables rapid characterization of Omicron in Australia', Nature Microbiology, 7, pp. 896 - 908, http://dx.doi.org/10.1038/s41564-022-01135-7

Lau KA; Kaufer A; Gray J; Theis T; Rawlinson WD, 2022, 'Proficiency testing for SARS-CoV-2 in assuring the quality and overall performance in viral RNA detection in clinical and public health laboratories', Pathology, 54, pp. 472 - 478, http://dx.doi.org/10.1016/j.pathol.2022.01.006

Foster CSP; Madden M; Chan R; Agapiou D; Bull RA; Rawlinson WD; Van Hal SJ, 2022, 'SARS-CoV-2 N-gene mutation leading to Xpert Xpress SARS-CoV-2 assay instability', Pathology, 54, pp. 499 - 501, http://dx.doi.org/10.1016/j.pathol.2022.02.001

Balachandran H; Phetsouphanh C; Agapiou D; Adhikari A; Rodrigo C; Hammoud M; Shrestha LB; Keoshkerian E; Gupta M; Turville S; Christ D; King C; Sasson SC; Bartlett A; Grubor-Bauk B; Rawlinson W; Aggarwal A; Stella AO; Klemm V; Mina MM; Post JJ; Hudson B; Gilroy N; Konecny P; Ahlenstiel G; Dwyer DE; Sorrell TC; Kelleher A; Tedla N; Lloyd AR; Martinello M; Bull RA, 2022, 'Maintenance of broad neutralizing antibodies and memory B cells 1 year post-infection is predicted by SARS-CoV-2-specific CD4+ T cell responses', Cell Reports, 38, pp. 110345, http://dx.doi.org/10.1016/j.celrep.2022.110345

Foster CSP; Stelzer-Braid S; Deveson IW; Bull RA; Yeang M; Au JP; Ruiz Silva M; van Hal SJ; Rockett RJ; Sintchenko V; Kim KW; Rawlinson WD, 2022, 'Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia', Viruses, 14, http://dx.doi.org/10.3390/v14020185

Waller KMJ; de la Mata NL; Rosales BM; Hedley JA; Kelly PJ; Thomson IK; O’Leary MJ; Cavazzoni E; Ramachandran V; Rawlinson WD; Wyburn KR; Webster AC, 2022, 'Characteristics and Donation Outcomes of Potential Organ Donors Perceived to Be at Increased Risk for Blood-borne Virus Transmission: An Australian cohort study 2010–2018', Transplantation, 106, pp. 348 - 357, http://dx.doi.org/10.1097/TP.0000000000003715


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