By Associate Professor John Zaunders

Journal articles

Colineau L; Rouers A; Yamamoto T; Xu Y; Urrutia A; Pham HP; Cardinaud S; Samri A; Dorgham K; Coulon PG; Cheynier R; Hosmalin A; Oksenhendler E; Six A; Kelleher AD; Zaunders J; Koup RA; Autran B; Moris A; Graff-Dubois S, 2015, 'HIV-infected spleens present altered follicular helper T cell (Tfh) subsets and skewed B cell maturation', PLoS ONE, 10, pp. e0140978, http://dx.doi.org/10.1371/journal.pone.0140978

Koelsch KK; Hey-Cunningham WJ; Sasson SC; Pearson C; Bailey M; Marks KH; Hiener BM; Palmer S; Zaunders JJ; Post JJ; Milliken ST; Kelleher AD; Cooper DA; Xu Y, 2015, 'Allogeneic bone marrow transplantation in two HIV-1 infected patients shows no detectable HIV-1 RNA or DNA, and a profound reduction in HIV-1 antibodies', Pathology, 47, pp. S55 - S55, http://dx.doi.org/10.1097/01.pat.0000461459.26902.eb

Ho J; Bailey M; Zaunders J; Mrad N; Sacks R; Sewell W; Harvey RJ, 2015, 'Cellular comparison of sinus mucosa vs polyp tissue from a single sinus cavity in chronic rhinosinusitis', International Forum of Allergy & Rhinology, 5, pp. 14 - 27, http://dx.doi.org/10.1002/alr.21417

Ho J; Bailey M; Zaunders J; Mrad N; Sacks R; Sewell W; Harvey RJ, 2015, 'Group 2 innate lymphoid cells (ILC2s) are increased in chronic rhinosinusitis with nasal polyps or eosinophilia', Clinical & Experimental Allergy, 45, pp. 394 - 403, http://dx.doi.org/10.1111/cea.12462

Tong WWY; Turville S; Roberts J; Zaunders J; Jin F; Poynten IM; Hillman RJ; Grulich AE; Kelleher AD; Carr A, 2015, 'P10.10 T-cells in the anal mucosa of men with high-grade squamous intraepithelial lesions', Sexually Transmitted Infections, 91, pp. A168.2 - A168, http://dx.doi.org/10.1136/sextrans-2015-052270.438

Zaunders JJ; Lévy Y; Seddiki N, 2014, 'Exploiting differential expression of the IL-7 receptor on memory T cells to modulate immune responses', Cytokine and Growth Factor Reviews, 25, pp. 391 - 401, http://dx.doi.org/10.1016/j.cytogfr.2014.07.012

Murray JM; Zaunders JJ; McBride KL; Xu Y; Bailey M; Suzuki K; Cooper DA; Emery S; Kelleher AD; Koelsch KK, 2014, 'HIV DNA subspecies persist in both activated and resting memory CD4⁺ T cells during antiretroviral therapy', Journal of Virology, 88, pp. 3516 - 3526, http://dx.doi.org/10.1128/JVI.03331-13

Seddiki N; Cook L; Hsu DC; Phetsouphanh C; Brown K; Xu Y; Kerr SJ; Cooper DA; Munier CML; Pett S; Ananworanich J; Zaunders J; Kelleher AD, 2014, 'Human antigen-specific CD4⁺CD25⁺CD134⁺CD39⁺ T cells are enriched for regulatory T cells and comprise a substantial proportion of recall responses', European Journal of Immunology, 44, pp. 1644 - 1661, http://dx.doi.org/10.1002/eji.201344102

Hsu DC; Kerr SJ; Thongpaeng P; Iampornsin T; Pett SL; Zaunders JJ; Avihingsanon A; Ubolyam S; Ananworanich J; Kelleher AD; Cooper DA, 2014, 'Incomplete restoration of Mycobacterium tuberculosis-specific-CD4 T cell responses despite antiretroviral therapy', Journal of Infection, 68, pp. 344 - 354, http://dx.doi.org/10.1016/j.jinf.2013.11.016

Phetsouphanh C; Xu Y; Bailey M; Pett S; Zaunders J; Seddiki N; Kelleher AD, 2014, 'Ratios of effector to central memory antigen-specific CD4 + T cells vary with antigen exposure in HIV+ patients', Immunology and Cell Biology, 92, pp. 384 - 388, http://dx.doi.org/10.1038/icb.2013.101

Estaquier J; Zaunders J; Laforge M, 2013, 'HIV integrase and the swan song of the CD4 T cells?', Retrovirology, 10, pp. 149, http://dx.doi.org/10.1186/1742-4690-10-149

Murray JM; Zaunders JJ; Koelsch KK; Natarajan V; Badralmaa Y; McBride K; Carrera A; Cooper DA; Emery S; Kelleher AD, 2013, 'Short communication: HIV blips while on antiretroviral therapy can indicate consistently detectable viral levels due to assay underreporting', AIDS Research and Human Retroviruses, 29, pp. 1621 - 1625, http://dx.doi.org/10.1089/aid.2013.0132

Hsu DC; Kerr SJ; Iampornsin T; Pett SL; Avihingsanon A; Thongpaeng P; Zaunders JJ; Ubolyam S; Ananworanich J; Kelleher AD; Cooper DA, 2013, 'Restoration of CMV-Specific-CD4 T Cells with ART Occurs Early and Is Greater in Those with More Advanced Immunodeficiency', PLoS ONE, 8, http://dx.doi.org/10.1371/journal.pone.0077479

Phetsouphanh C; Xu Y; Amin J; Seddiki N; Procopio F; Sekaly RP; Zaunders JJ; Kelleher AD, 2013, 'Characterization of Transcription Factor Phenotypes within Antigen-Specific CD4+ T Cells Using Qualitative Multiplex Single-Cell RT-PCR', PLoS ONE, 8, http://dx.doi.org/10.1371/journal.pone.0074946

McBride K; Xu Y; Bailey M; Seddiki N; Suzuki K; Murray JM; Gao Y; Yan C; Cooper DA; Kelleher AD; Koelsch KK; Zaunders J, 2013, 'The majority of HIV type 1 DNA in circulating CD4⁺ T lymphocytes is present in non-gut-homing resting memory CD4⁺ T cells', AIDS Research and Human Retroviruses, 29, pp. 1330 - 1339, http://dx.doi.org/10.1089/aid.2012.0351

Zaunders J; van Bockel D, 2013, 'Innate and Adaptive Immunity in Long-Term Non-Progression in HIV Disease', Frontiers in Immunology, 4, http://dx.doi.org/10.3389/fimmu.2013.00095

Xu Y; Fernandez CS; Alcantara S; Bailey MR; De Rose R; Kelleher AD; Zaunders J; Kent SJ, 2013, 'Serial study of lymph node cell subsets using fine needle aspiration in pigtail macaques', Journal of Immunological Methods, 394, pp. 73 - 83, http://dx.doi.org/10.1016/j.jim.2013.05.005

Xu Y; Weatherall CJ; Bailey MR; Alcantara S; De Rose R; Estaquier J; Wilson KM; Suzuki K; Corbeil J; Cooper DA; Kent SJ; Kelleher AD; Zaunders J, 2013, 'Simian immunodeficiency virus infects follicular helper CD4 T cells in lymphoid tissues during pathogenic infection of pigtail macaques', Journal of Virology, 87, pp. 3760 - 3773, http://dx.doi.org/10.1128/JVI.02497-12

Seddiki N; Phetsouphanh C; Swaminathan S; Xu Y; Rao S; Li J; Sutcliffe E; Denyer G; Finlayson R; Gelgor L; Cooper DA; Zaunders J; Kelleher AD, 2013, 'The microRNA-9/B-lymphocyte-induced maturation protein-1/IL-2 axis is differentially regulated in progressive HIV infection', European Journal of Immunology, 43, pp. 510 - 520, http://dx.doi.org/10.1002/eji.201242695

Hsu DC; Zaunders J; Plit ML; Leeman C; Ip S; Iampornsin T; Pett SL; Bailey MR; Amin J; Ubolyam S; Avihingsanon A; Ananworanich J; Ruxrungtham K; Cooper DA; Kelleher AD, 2012, 'A novel assay detecting recall response to Mycobacterium tuberculosis: Comparison with existing assays', Tuberculosis, 92, pp. 321 - 327, http://dx.doi.org/10.1016/j.tube.2012.03.008

Keoshkerian E; Helbig K; Beard M; Zaunders J; Seddiki N; Kelleher AD; Hampartzoumian T; Zekry A; Lloyd AR, 2012, 'A novel assay for detection of hepatitis C virus-specific effector CD4(+) T cells via co-expression of CD25 and CD134', Journal of Immunological Methods, 375, pp. 148 - 158, http://dx.doi.org/10.1016/j.jim.2011.10.004

Murray JM; McBride K; Boesecke C; Bailey MR; Amin J; Suzuki K; Baker D; Zaunders JJ; Emery S; Cooper DA; Koelsch KK; Kelleher AD, 2012, 'Integrated HIV DNA accumulates prior to treatment while episomal HIV DNA records ongoing transmission afterwards', AIDS, 26, pp. 543 - 550, http://dx.doi.org/10.1097/QAD.0b013e328350fb3c

Sasson SC; Zaunders J; Seddiki N; Mcbride K; Koelsch KK; Merlin KM; Smith DE; Cooper DA; Kelleher AD; Bailey MR, 2012, 'Progressive activation of CD127+132- recent thymic emigrants into terminally differentiated CD127-132+ T-cells in HIV-1 infection', PLoS One, 7, pp. e31148, http://dx.doi.org/10.1371/journal.pone.0031148

Savkovic B; Macpherson JL; Zaunders J; Kelleher A; Knop A; Pond S; Evans L; Symonds G; Murray JM, 2012, 'T-lymphocyte perturbation following large-scale apheresis and hematopoietic stem cell transplantation in HIV-infected individuals', Clinical Immunology, 144, pp. 159 - 171, http://dx.doi.org/10.1016/j.clim.2012.06.004

Sauce D; Larsen M; Fastenackels S; Pauchard M; Ait-mohand H; Schneider L; Guihot A; Boufassa F; Zaunders J; Iguertsira M; Bailey M; Gorochov G; Duvivier C; Carcelain G; Kelleher AD; Simon A; Meyer L; Costagliola D; Deeks SG; Lambotte O; Autran B; Hunt P; Katlama C; Appay V, 2011, 'HIV disease progression despite suppression of viral replication is associated with exhaustion of lymphopoiesis', Blood, 117, pp. 5142 - 5151, http://dx.doi.org/10.1182/blood-2011-01-331306

Laforge M; Campillo-gimenez L; Monceaux V; Cumont M; Hurtel B; Corbeil J; Zaunders J; Eblim C; Estaquier J, 2011, 'HIV/SIV infection primes monocytes and dendritic cells for apoptosis', PLoS Pathogens, 7, pp. N/A - N/A, http://www.plospathogens.org/article/info%3Adoi/10.1371/journal.ppat.1002087

Koelsch KK; Boesecke C; Mcbride K; Gelgor L; Fahey P; Natarajan V; Baker D; Bloch M; Murray JM; Zaunders J; Emery S; Cooper DA; Kelleher AD, 2011, 'Impact of treatment with raltegravir during primary or chronic HIV infection on RNA decay characteristics and the HIV viral reservoir', AIDS, 25, pp. 2069 - 2078, http://dx.doi.org/10.1097/QAD.0b013e32834b9658

Van Bockel DJ; Price DA; Munier CM; Venturi V; Asher T; Ladell K; Greenaway HY; Zaunders J; Douek DC; Cooper DA; Davenport MP; Kelleher AD, 2011, 'Persistent survival of prevalent clonotypes within an immunodominant HIV gag-specific CD8 + T cell response', Journal of Immunology, 186, pp. 359 - 371, http://www.jimmunol.org/content/186/1/359

Zaunders J; Dyer W; Churchill M, 2011, 'The Sydney Blood Bank Cohort: Implications for viral fitness as a cause of elite control', Current opinion in HIV & AIDS, 6, pp. 151 - 156, http://dx.doi.org/10.1097/COH.0b013e3283454d5b

Campillo-Gimenez L; Cumont MC; Fay M; Kared H; Monceaux V; Diop O; Müller-Trutwin M; Hurtrel B; Lévy Y; Zaunders J; Dy M; Leite-de-Moraes MC; Elbim C; Estaquier J, 2010, 'AIDS progression is associated with the emergence of IL-17-producing cells early after simian immunodeficiency virus infection', Journal of Immunology, 184, pp. 984 - 992, http://dx.doi.org/10.4049/jimmunol.0902316

Estaquier J; Zaunders JJ, 2010, 'Cytokines and the pathogenesis of HIV infection', European Cytokine Network, 21, pp. 195 - 196, http://dx.doi.org/10.1684/ecn.2010.0200

Campillo-Gimenez L; Elbim C; Laforge M; Leite-de-Moraes MC; Zaunders J; Estaquier J, 2010, 'IL-17 and HIV pathogenesis', European Cytokine Network, 21, pp. 222 - 225, http://dx.doi.org/10.1684/ecn.2010.0196

Pett SL; Zaunders J; Bailey M; Murray JM; Macrae K; Emery S; Cooper DA; Kelleher AD, 2010, 'A novel Chemokine-Receptor-5 (CCR5) blocker, SCH532706, has differential effects on CCR5+CD4+ and CCR5+CD8+ T cell numbers in chronic HIV infection', AIDS Research and Human Retroviruses, 26, pp. 653 - 661, http://dx.doi.org/10.1089/aid.2009.0278

Campillo-gimenez L; Cumont M; Fay MF; Kared H; Monceaux V; Diop O; Muller M; Hurtrel B; Levy V; Zaunders J; Dy M; Leite-de-Moraes MC; Elbim C; Estaquier J, 2010, 'AIDS progression is associated with the emergence of IL-17 producing cells early after SIV infection', Journal of Immunology, 184, pp. 984 - 992

Sasson SC; Smith S; Seddiki N; Zaunders J; Bryant AJ; Koelsch KK; Weatherall CJ; Munier CM; McGinley C; Yeung J; Mulligan S; Moore JJ; Cooper DA; Milliken ST; Kelleher AD, 2010, 'IL-7 receptor is expressed on adult pre-B-cell acute lymphoblastic leukemia and other B-cell derived neoplasms and correlates with expression of proliferation and survival markers', Cytokine, 50, pp. 58 - 68

Koelsch KK; Xu Y; Bailey M; McBride K; Seddiki N; Suzuki K; Murray J; Cooper DA; Kelleher AD; Zaunders J, 2010, 'Most HIV DNA in PBMC is present in non‐gut homing, resting memory CD4+ T cells with a ß7‐CD38‐CD127 high phenotype', Journal of the International AIDS Society, 13, http://dx.doi.org/10.1186/1758-2652-13-s3-o2

Campillo-gimenez L; Laforge M; Fay MF; Brussel A; Cumont M; Monceaux V; Diop O; Levy Y; Hurtrel B; Zaunders J; Corbeil J; Elbim C; Estaquier J, 2010, 'Nonpathogenesis of simian immunodeficiency virus infection is associated with reduced inflammation and recruitment of plasmacytoid dendritic cells to lymph nodes, not to lack of an interferon type I response, during the acute phase', Journal of Virology, 84, pp. 1838 - 1846, http://dx.doi.org/10.1128/JVI.01496-09

Swaminathan S; Zaunders J; Wilkinson J; Suzuki K; Kelleher AD, 2009, 'Does the presence of anti-HIV miRNAs in monocytes explain their resistance to HIV-1 infection?', Blood, 113, pp. 5029 - 5030, http://dx.doi.org/10.1182/blood-2009-01-196741

Munier CM; Zaunders J; Ip S; Cooper DA; Kelleher AD, 2009, 'A culture amplified multi-parametric intracellular cytokine assay (CAMP-ICC) for enhanced detection of antigen specific T-cell responses', Journal of Immunological Methods, 345, pp. 1 - 16

Zaunders J; Munier ML; Seddiki N; Pett SL; Ip S; Bailey M; Xu Y; Brown KJ; Dyer W; Kim MS; De Rose R; Kent SJ; Jiang L; Breit SN; Emery S; Cunningham AL; Cooper DA; Kelleher AD, 2009, 'High levels of human antigen-specific CD4+ T cells in peripheral blood revealed by stimulated coexpression of CD25 and CD134 (OX40)', Journal of Immunology, 183, pp. 2827 - 2836, http://dx.doi.org/10.4049/jimmunol.0803548

Seddiki N; Sasson SC; Santner-Nanan B; Munier M; Van Bockel DJ; Ip S; Marriott D; Pett SL; Nanan R; Cooper DA; Zaunders J; Kelleher AD, 2009, 'Proliferation of weakly suppressive regulatory CD4+ T cells is associated with over-active CD4+ T-cell responses in HIV-positive patients with mycobacterial immune restoration disease', European Journal of Immunology, 39, pp. 391 - 403, http://dx.doi.org/10.1002/eji.200838630

Dyer WB; Zaunders JJ; Yuan FF; Wang B; Learmont JC; Geczy AF; Saksena NK; McPhee DA; Gorry PR; Sullivan JS, 2008, 'Mechanisms of HIV non-progression; robust and sustained CD4+ T-cell proliferative responses to p24 antigen correlate with control of viraemia and lack of disease progression after long-term transfusion-acquired HIV-1 infection', Retrovirology, 5, http://dx.doi.org/10.1186/1742-4690-5-112

Pett SL; Zaunders J; Bailey M; Cooper DA; MacRae K; Emery S; Kelleher A, 2008, 'Changes in CCR5+ cells and antigen-specific CD4+ T-cells during monotherapy with a CCR5 antagonist SCH532706 compared with combination therapy', Journal of the International AIDS Society, 11, http://dx.doi.org/10.1186/1758-2652-11-s1-p297

De Rose R; Mason RS; Loh L; Peut V; Smith MZ; Fernandez CS; Alcantara S; amarasena T; Reece J; Seddiki N; Kelleher AD; Zaunders J; Kent SJ, 2008, 'Safety, immunogenicity and efficacy of peptide-pulsed cellular immunotherapy in macaques.', Journal of Medical Primatology, 37, pp. 69 - 78

Lewin S; Murray JM; Solomon A; Wightman F; Cameron P; Purcell DJ; Zaunders J; Grey PA; Bloch M; Smith DE; Cooper DA; Kelleher AD, 2008, 'Virologic determinants of success after structured treatment interruptions in antiretrovirals in acute HIV-1 infection', JAIDS: Journal of Acquired Immune Deficiency Syndromes, 47, pp. 140 - 147

Zaunders J; Jing J; Leipold M; Maecker H; Kelleher AD; Koch I, 2007, 'Computationally efficient multidimensional analysis of complex flow cytometry data using second order polynomial histograms', Cytometry Part A, 89, pp. 44 - 58, http://dx.doi.org/10.1002/cyto.a.22704

Maher L; Tachedjian G; Hoy J; Millwood I; Guy R; Walsh N; Zaunders J; Jaworowski A; Kaldor J, 2007, '4th International AIDS Society Conference on HIV Pathogenesis, Treatment and Prevention', Medical Journal of Australia, 187, pp. 610 - 612

Wu J; Wang B; Belov L; Chrisp J; Learmont JC; Dyer W; Zaunders J; Cunningham AL; Dwyer D; Saksena N, 2007, 'Antibody microarray analysis of cell surface antigens on CD4+ and CD8+ T cells from HIV+ individuals correlates with disease stages', Retrovirology, 83

Croitoru-Lamoury J; Lamoury F; Zaunders J; Veas LA; Brew BJ, 2007, 'Human mesenchymal stem cells constitutively express chemokines and chemokine receptors that can be upregulated by cytokines, IFN-beta, and Copaxone', Journal of Interferon and Cytokine Research, 27, pp. 53 - 64

Gorry P; Mcphee D; Verity E; Dyer W; Wesselingh S; Learmont J; Sullivan JS; Roche M; Zaunders J; Gabuzda D; Crowe S; Mills J; Lewin S; Brew BJ; Cunningham AL; Churchill M, 2007, 'Pathogenicity and immunogenicity of attenuated, nef-deleted HIV-1 strains in vivo', Retrovirology, 4 (66)

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