By Dr Francesca Di Giallonardo

Journal articles

Simen BB; Braverman MS; Abbate I; Aerssens J; Bidet Y; Bouchez O; Gabriel C; Izopet J; Kessler HH; Stelzl E; Di Giallonardo F; Schlapbach R; Radonic A; Paredes R; Recordon-Pinson P; Sakwa J; St. John EP; Schmitz-Agheguian GG; Metzner KJ; Däumer MP; Danzer M; Hackl C; Pröll J; Niklas N; Bizon B; Van Eygen V; Vandenbroucke I; Van Marck H; Dubois M; Nicot F; Milan D; Masquelier B; Fleury H; Viala S; Marell R; Thiele B; Kuecherer C; Meixenberger K; Nitsche A; Dabrowski PW; Ihlenfeldt HG; Capobianchi MR; Bruselles A; Rozera G; Bartolini B; Stephens D; Makgamathe M; Pillay D; Gordon M; Green T; Codoñer FM; Pou C; Günthard HF; Künzli-Gontarczyk M; Bruggmann R; Qi W; Turenchalk G; Hanczaruk B, 2014, 'An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing', Journal of Virological Methods, 204, pp. 31 - 37, http://dx.doi.org/10.1016/j.jviromet.2014.04.007

Di Giallonardo F; Zagordi O; Duport Y; Leemann C; Joos B; Künzli-Gontarczyk M; Bruggmann R; Beerenwinkel N; Günthard HF; Metzner KJ, 2013, 'Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination', Plos One, 8, http://dx.doi.org/10.1371/journal.pone.0074249

Decker M; Adamska M; Cronin A; Di Giallonardo F; Burgener J; Marowsky A; Falck JR; Morisseau C; Hammock BD; Gruzdev A; Zeldin DC; Arand M, 2012, 'EH3 (ABHD9): The first member of a new epoxide hydrolase family with high activity for fatty acid epoxides', Journal of Lipid Research, 53, pp. 2038 - 2045, http://dx.doi.org/10.1194/jlr.M024448

Althaus CF; Vongrad V; Niederöst B; Joos B; Di Giallonardo F; Rieder P; Pavlovic J; Trkola A; Günthard HF; Metzner KJ; Fischer M, 2012, 'Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells', Retrovirology, 9, http://dx.doi.org/10.1186/1742-4690-9-27

Metzner KJ; Leemann C; Di Giallonardo F; Grube C; Scherrer AU; Braun D; Kuster H; Weber R; Guenthard HF, 2011, 'Reappearance of minority K103N HIV-1 variants after interruption of ART initiated during primary HIV-1 infection', Plos One, 6, http://dx.doi.org/10.1371/journal.pone.0021734

Knoepfel SA; Di Giallonardo F; Däumer M; Thielen A; Metzner KJ, 2011, 'In-depth analysis of G-to-A hypermutation rate in HIV-1 env DNA induced by endogenous APOBEC3 proteins using massively parallel sequencing', Journal of Virological Methods, 171, pp. 329 - 338, http://dx.doi.org/10.1016/j.jviromet.2010.11.016

Huelsmann PM; Hofmann AD; Knoepfel SA; Popp J; Rauch P; Di Giallonardo F; Danke C; Gueckel E; Schambach A; Wolff H; Metzner KJ; Berens C, 2011, 'A suicide gene approach using the human pro-apoptotic protein tBid inhibits HIV-1 replication', BMC Biotechnology, 11, http://dx.doi.org/10.1186/1472-6750-11-4

Conference Papers

Topfer A; Di Giallonardo F; Metzner KJ; Gunthard HF; Beerenwinkel N, 2013, 'Probing of viral diversity by global haplotype prediction', in 2013 IEEE 3rd International Conference on Computational Advances in Bio and medical Sciences (ICCABS), IEEE, pp. 1 - 1, presented at 2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 12 June 2013 - 14 June 2013, http://dx.doi.org/10.1109/iccabs.2013.6629231

Cozzi-Lepri A; Noguera-Julian M; Di Giallonardo F; Schuurman R; Daeumer M; Aitken S; Guenthard HF; Brun-Vezinet F; Metzner KJ; Paredes R, 2013, 'Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multi-cohort European case-control study using centralized ultrasensitive 454 sequencing', in ANTIVIRAL THERAPY, INT MEDICAL PRESS LTD, CANADA, Toronto, pp. A41 - A41, presented at International Workshop on HIV and Hepatitis Virus Drug Resistance and Curative Strategies, CANADA, Toronto, 04 June 2013 - 08 June 2013, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000335229500037&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Adamska M; Bekteshi M; Cronin A; Decker M; di Giallonardo F; Arand M, 2008, 'Characterisation of a new human epoxide hydrolase capable of metabolizing epoxyeicosatrienoic acids', in FASEB JOURNAL, FEDERATION AMER SOC EXP BIOL, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000208467808115&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Adamska M; Cronin A; Decker M; Di Giallonardo F; Arand M, 2008, 'Identification and characterization of a new mammalian epoxide hydrolase', in NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY, SPRINGER, GERMANY, Mainz, pp. 67 - 67, presented at 49th Annual Meeting of the German-Society-for-Experimental-and-Clinical-Pharmacology-and-Toxicology, GERMANY, Mainz, 11 March 2008 - 13 March 2008, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000254204900333&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Di Giallonardo F; Adamska M; Arand M, 2008, 'Identification of the amino acid residues responsible for the catalytic activity of the new human epoxide hydrolase', in NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY, SPRINGER, GERMANY, Mainz, pp. 67 - 67, presented at 49th Annual Meeting of the German-Society-for-Experimental-and-Clinical-Pharmacology-and-Toxicology, GERMANY, Mainz, 11 March 2008 - 13 March 2008, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000254204900334&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Conference Abstracts

Adikari TN; Leung P; Grifoni A; Di Giallonardo F; Weiskopf D; Sette A; Bull RA; Luciani F, 2019, 'Pan serotypic, highly conserved CD8 epitopes for a potential T-cell based vaccine against dengue infection', in EUROPEAN JOURNAL OF IMMUNOLOGY, WILEY, PEOPLES R CHINA, Beijing, Vol. 49, pp. 1690 - 1690, presented at 17th International Congress of Immunology of the International-Union-of-Immunological-Societies (IUIS), PEOPLES R CHINA, Beijing, 19 October 2019 - 23 October 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000490026905345&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Preprints

Jurisic L; Auerswald H; Marcacci M; Di Giallonardo F; Coetzee LM; Curini V; Averaimo D; Ortiz-Baez AS; Cammà C; Di Teodoro G; Richt JA; Holmes EC; Lorusso A, 2024, Insect-specific Alphamesonivirus-1 (Mesoniviridae) in lymph node and lung tissues from two horses with acute respiratory syndrome, http://dx.doi.org/10.1101/2024.11.10.622896

Sghaier S; Sailleau C; Marcacci M; Thabet S; Curini V; Ben Hassine T; Teodori L; Portanti O; Hammami S; Jurisic L; Spedicato M; Postic L; Gazani I; Ben Osman R; Zientara S; Breard E; Calistri P; Richt JA; Holmes EC; Savini G; Di Giallonardo F; Lorusso A, 2022, Epizootic Haemorrhagic Disease Virus Serotype 8 in Tunisia, 2021, http://dx.doi.org/10.20944/preprints202211.0195.v1

Di Giallonardo F; Puglia I; Curini V; Cammà C; Mangone I; Calistri P; Cobbin JCA; Holmes EC; Lorusso A, 2021, Emergence and spread of SARS-CoV-2 lineages B.1.1.7 and P.1 in Italy, http://dx.doi.org/10.1101/2021.03.24.21254277

Campbell SJ; Ashley W; Gil-Fernandez M; Newsome TM; Di Giallonardo F; Ortiz-Baez AS; Mahar JE; Towerton AL; Gillings M; Holmes EC; Carthey AJR; Geoghegan JL, 2020, Red fox viromes across an urban-rural gradient, http://dx.doi.org/10.1101/2020.06.15.153858

Geoghegan JL; Di Giallonardo F; Wille M; Ortiz-Baez AS; Costa VA; Ghaly T; Mifsud JCO; Turnbull OMH; Bellwood DR; Williamson JE; Holmes EC, 2020, Virome composition in marine fish revealed by meta-transcriptomics, http://dx.doi.org/10.1101/2020.05.06.081505

Featherstone LA; Di Giallonardo F; Holmes EC; Vaughan TG; Duchêne S, 2019, Infectious disease phylodynamics with occurrence data, http://dx.doi.org/10.1101/596700

Kerr PJ; Eden J-S; Di Giallonardo F; Peacock D; Liu J; Strive T; Read AF; Holmes EC, 2018, Punctuated evolution of myxoma virus: rapid and disjunct evolution of a recent viral lineage in Australia, http://dx.doi.org/10.1101/465583

Di Giallonardo F; Kok J; Fernandez M; Carter I; Geoghegan JL; Dwyer DE; Holmes EC; Eden J-S, 2018, Evolution of Human Respiratory Syncytial Virus (RSV) over Multiple Seasons in New South Wales, Australia, http://dx.doi.org/10.20944/preprints201808.0318.v1

Wong AKH; Mathivanan V; Di Giallonardo F; Ahlenstiel C; Turville SG, A Molecular Basis for the Increased Transmission of Ebolavirus in Recent Outbreaks, http://dx.doi.org/10.2139/ssrn.3507710

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