Select Publications

Preprints

Masamsetti VP; Salehin N; Kim HJ; Santucci N; Weatherstone M; Knowles H; Sun J; McMahon R; Studdert JB; Aryamanesh N; Wang R; Jing N; Yang P; Osteil P; Tam PPL, 2024, Characterization of the mesendoderm progenitors in the gastrulating mouse embryo, , http://dx.doi.org/10.1101/2024.04.28.591221

Kim HJ; O’Hara-Wright M; Kim D; Loi TH; Lim B; Jamieson R; Gonzalez-Cordero A; Yang P, 2022, Comprehensive Characterisation of Fetal and Mature Retinal Cell Identity to Assess the Fidelity of Retinal Organoids, , http://dx.doi.org/10.1101/2022.06.13.495996

Chen C; Kim HJ; Yang P, 2022, Evaluating spatially variable gene detection methods for spatial transcriptomics data, , http://dx.doi.org/10.1101/2022.11.23.517747

Kim HJ; Wang K; Chen C; Lin Y; Tam PPL; Lin D; Yang JYH; Yang P, 2021, Cepo uncovers cell identity through differential stability, , http://dx.doi.org/10.1101/2021.01.10.426138

Fernando M; Lee S; Wark J; Xiao D; Kim H; Smith G; Wong T; Teber E; Ali R; Yang P; Graham M; Gonzalez-Cordero A, 2021, Differentiation of cortical brain organoids and optic nerve-like structures from retinal confluent cultures of pluripotent stem cells, , http://dx.doi.org/10.1101/2021.05.16.444356

Kim HJ; Kim T; Oldfield A; Yang P, 2020, Integrative Analysis Reveals Histone Demethylase LSD1/KDM1A Associates with RNA Polymerase II Pausing, , http://dx.doi.org/10.1101/2020.10.13.338103

Kim HJ; Kim T; Hoffman N; Xiao D; James D; Humphrey S; Yang P, 2020, PhosR enables processing and functional analysis of phosphoproteomic data, , http://dx.doi.org/10.1101/2020.08.31.276329

Kim HJ; Lin Y; Geddes T; Yang J; Yang P, 2019, CiteFuse enables multi-modal analysis of CITE-seq data, , http://dx.doi.org/10.1101/854299

Lin Y; Cao Y; Kim H; Salim A; Speed T; Lin D; Yang P; Yang JYH, 2019, scClassify: hierarchical classification of cells, , http://dx.doi.org/10.1101/776948

Kim HJ; Kim T; Hoffman NJ; Xiao D; James DE; Humphrey SJ; Yang P, PhosR Enables Processing and Functional Analysis of Phosphoproteomic Data, , http://dx.doi.org/10.2139/ssrn.3628295


Back to profile page