By Dr Hasindu Malshan Gamaarachchi

Conference Papers

Gamaarachchi H, 2026, 'Scalable, Portable and Live Nanopore Sequence Analysis', Association for Computing Machinery (ACM), pp. 84 - 87, presented at Proceedings of the 40th ACM International Conference on Supercomputing - Workshops, http://dx.doi.org/10.1145/3774895.3815154

Liyanage K; Gamaarachchi H; Saadat H; Li T; Samarakoon H; Parameswaran S, 2024, 'Accelerating Chaining in Genomic Analysis Using RISC- V Custom Instructions', in Proceedings Design Automation and Test in Europe Date, http://dx.doi.org/10.23919/DATE58400.2024.10546650

Gong J; Saadat H; Javaid H; Gamaarachchi H; Taubman D; Parameswaran S, 2024, 'SEA: Sign-Separated Accumulation Scheme for Resource-Efficient DNN Accelerators', in Proceedings Design Automation and Test in Europe Date, http://dx.doi.org/10.23919/DATE58400.2024.10546846

Gamaarachchi H; Liyanage K; Parameswaran S, 2023, 'Invited: Algorithms and Architectures for Accelerating Long Read Sequence Analysis', in Proceedings Design Automation Conference, http://dx.doi.org/10.1109/DAC56929.2023.10247772

Samarasinghe S; Premathilaka P; Herath W; Gamaarachchi H; Ragel R, 2021, 'Energy Efficient Adaptive Banded Event Alignment using OpenCL on FPGAs', in 2021 10th International Conference on Information and Automation for Sustainability Iciafs 2021, pp. 369 - 374, http://dx.doi.org/10.1109/ICIAfS52090.2021.9606056

Laguna AF; Gamaarachchi H; Yin X; Niemier M; Parameswaran S; Hu XS, 2020, 'Seed-and-Vote based In-Memory Accelerator for DNA Read Mapping', in IEEE ACM International Conference on Computer Aided Design Digest of Technical Papers Iccad, http://dx.doi.org/10.1145/3400302.3415651

Prasad Mohanty R; Gamaarachchi H; Lambert A; Parameswaran S, 2019, 'Swaram: Portable energy and cost efficient embedded system for genomic processing', in ACM Transactions on Embedded Computing Systems, http://dx.doi.org/10.1145/3358211

Gamaarachchi H; Fawsan M; Fasna F; Elkaduwe D, 2017, 'User-friendly interface for GPGPU programming', in Proceedings of the 2017 6th National Conference on Technology and Management Excel in Research and Build the Nation Nctm 2017, pp. 99 - 104, http://dx.doi.org/10.1109/NCTM.2017.7872835

Kumara TN; Gamaarachchi H; Prathap G; Ragel R, 2017, 'Generalized and hybrid fast-ICA implementation using GPU', in 16th International Conference on Advances in ICT for Emerging Regions Icter 2016 Conference Proceedings, pp. 13 - 20, http://dx.doi.org/10.1109/ICTER.2016.7829893

Prematilake M; Wickramasinghe B; Vithanage O; Gamaarachchi H; Ragel R, 2016, 'Accelerating Mutual Information Analysis based Power Analysis Attacks Using GPU', in 2016 IEEE International Conference on Information and Automation for Sustainability Interoperable Sustainable Smart Systems for Next Generation Iciafs 2016, http://dx.doi.org/10.1109/ICIAFS.2016.7946531

Jiffriya M; Jahan MA; Gamaarachchi H; Ragel RG, 2016, 'Accelerating text-based plagiarism detection using GPUs', in 2015 IEEE 10th International Conference on Industrial and Information Systems Iciis 2015 Conference Proceedings, pp. 395 - 400, http://dx.doi.org/10.1109/ICIINFS.2015.7399044

Gamaarachchi H; Ganegoda H; Ragel R, 2016, 'The A to Z of building a testbed for Power Analysis attacks', in 2015 IEEE 10th International Conference on Industrial and Information Systems Iciis 2015 Conference Proceedings, pp. 501 - 506, http://dx.doi.org/10.1109/ICIINFS.2015.7399063

Namal S; Gamaarachchi H; Lee GM; Um TW, 2016, 'Autonomic trust management in cloud-based and highly dynamic IoT applications', in Proceedings of the 2015 ITU Kaleidoscope Trust in the Information Society K 2015 Academic Conference, http://dx.doi.org/10.1109/Kaleidoscope.2015.7383635

Namal S; Gamaarachchi H; Lee GM; Um T-W, 2015, 'AUTONOMIC TRUST MANAGEMENT IN CLOUD-BASED AND HIGHLY DYNAMIC IOT APPLICATIONS', in 2015 ITU KALEIDOSCOPE: TRUST IN THE INFORMATION SOCIETY (K-2015), IEEE, SPAIN, Univ Autonoma, Barcelona, pp. 83 - 90, presented at ITU Kaleidoscope Academic Conference on Trust in the Information Society, SPAIN, Univ Autonoma, Barcelona, 09 December 2015 - 11 December 2015, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000380568500017&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Gamaarachchi H; Ragel R; Jayasinghe D, 2014, 'Accelerating correlation power analysis using graphics processing units (GPUs)', in 2014 7th International Conference on Information and Automation for Sustainability Sharpening the Future with Sustainable Technology Iciafs 2014, http://dx.doi.org/10.1109/ICIAFS.2014.7069547

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