ORCID as entered in ROS
https://orcid.org/0000-0001-5100-9724
Select Publications
Conference Papers
, 2018, 'Deep neural networks and distant supervision for geographic location mention extraction', in Bioinformatics, pp. i565 - i573, http://dx.doi.org/10.1093/bioinformatics/bty273
, 2018, 'Clinical NER and Relation Extraction using Bi-Char-LSTMs and Random Forest Classifiers', in Proceedings of Machine Learning Research, pp. 25 - 30
, 2017, 'CSaRUS-CNN at AMIA-2017 Tasks 1, 2: Under sampled CNN for text classification', in CEUR Workshop Proceedings, pp. 76 - 78
, 2016, 'Social media mining for public health monitoring and surveillance', in Pacific Symposium on Biocomputing 2016, PSB 2016, Kohala Coast, Hawaii, USA, pp. 468 - 479, presented at
, 2015, 'Analyses of Merging Clinical and Viral Genetic Data for Influenza Surveillance', in Proceedings - a conference of the American Medical Informatics Association / . AMIA Annual Fall Symposium. AMIA Fall Symposium, San Francisco, CA, pp. 1995 - 2004, presented at
, 2015, 'Conceptualizing a Novel Quasi-Continuous Bayesian Phylogeographic Framework for Spatiotemporal Hypothesis Testing.', in Conceptualizing a Novel Quasi-Continuous Bayesian Phylogeographic Framework for Spatiotemporal Hypothesis Testing., AMIA Jt Summits Transl Sci Proc, San Francisco, CA, presented at
, 2015, 'Analysis of Viral Genetics for Estimating Diffusion of Influenza A H6N1', in American Medical Informatics Association Joint Summits on Translational Science, San Francisco, CA, pp. 36 - 40, presented at
, 2014, 'Generalized linear models for identifying predictors of the evolutionary diffusion of viruses.', San Francisco, CA, pp. 23 - 28, presented at
, 2014, 'Natural language processing methods for enhancing geographic metadata for phylogeography of zoonotic viruses.', in Natural language processing methods for enhancing geographic metadata for phylogeography of zoonotic viruses., American Medical Informatics Association Joint Summints on Translational Science, San Francisco, CA, pp. 102 - 111, presented at
, 2014, 'Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses', in Proceedings of the Annual Meeting of the Association for Computational Linguistics, pp. 1 - 9
, 2014, 'Natural language processing methods for enhancing geographic metadata for phylogeography of zoonotic viruses.', in AMIA Jt Summits Transl Sci Proc, United States, pp. 102 - 111, United States, https://www.ncbi.nlm.nih.gov/pubmed/25717409
, 2010, 'GEOGRAPHIC VARIATION OF MISSED VISITS AMONG HIV INFECTED VETERANS', in JOURNAL OF GENERAL INTERNAL MEDICINE, SPRINGER, MN, Minneapolis, pp. 285 - 285, presented at
, 2010, 'RURAL RESIDENCE IS ASSOCIATED WITH INCREASED MORTALITY AMONG VETERANS INITIATING HIGHLY ACTIVE ANTIRETROVIRAL THERAPY FOR HIV INFECTION', in JOURNAL OF GENERAL INTERNAL MEDICINE, SPRINGER, MN, Minneapolis, pp. 386 - 387, presented at
, 2005, 'SOVAT: Spatial OLAP visualization and analysis tool', in Proceedings of the Annual Hawaii International Conference on System Sciences, pp. 142
, 2002, 'The companion project - A wearable computing device for the patient for reducing medical errors and improving patient care', in Kohane IS (ed.), AMIA 2002 SYMPOSIUM, PROCEEDINGS, HANLEY & BELFUS INC MED PUBLISHERS, TX, San Antonio, pp. 1157 - 1157, presented at
, 'SOVAT: Spatial OLAP Visualization and Analysis Tool', in Proceedings of the 38th Annual Hawaii International Conference on System Sciences, IEEE, presented at
Preprints
, 2024, Potential Pathways of Spread of Highly Pathogenic Avian Influenza A/H5N1 Clade 2.3.4.4b Across Dairy Farms in the United States, , http://dx.doi.org/10.1101/2024.05.02.24306785
, 2024, Patient-Related Metadata Reported in Sequencing Studies of SARS-CoV-2: Protocol for a Scoping Review and Bibliometric Analysis., , http://dx.doi.org/10.1101/2023.07.14.23292681
, 2023, Text mining biomedical literature to identify extremely unbalanced data for digital epidemiology and systematic reviews: dataset and methods for a SARS-CoV-2 genomic epidemiology study., , http://dx.doi.org/10.1101/2023.07.29.23293370
, 2022, SEED: Symptom Extraction from English Social Media Posts using Deep Learning and Transfer Learning., , http://dx.doi.org/10.1101/2021.02.09.21251454
, 2021, Unrestricted Online Sharing of High-frequency, High-resolution Data on SARS-CoV-2 in Wastewater to Inform the COVID-19 Public Health Response in Greater Tempe, Arizona, , http://dx.doi.org/10.1101/2021.07.29.21261338
, 2021, Identifying Mitigation Strategies for COVID-19 Superspreading on Flights using Models that Account for Passenger Movement, , http://dx.doi.org/10.48550/arxiv.2106.10313
, 2020, The Molecular Epidemiology and Clinical Phylogenetics of Rhinoviruses among Paediatric Cases in Sydney, Australia., , http://dx.doi.org/10.22541/au.160614561.14239652/v1
, 2020, From Bad to Worse: Airline Boarding Changes in Response to COVID-19, , http://dx.doi.org/10.48550/arxiv.2006.06403
, 2020, An 81 base-pair deletion in SARS-CoV-2 ORF7a identified from sentinel surveillance in Arizona (Jan-Mar 2020)., , http://dx.doi.org/10.1101/2020.04.17.20069641
, 2020, Mathematical assessment of the impact of non-pharmaceutical interventions on curtailing the 2019 novel Coronavirus, , http://dx.doi.org/10.48550/arxiv.2004.07391
, 2020, Mathematical assessment of the impact of non-pharmaceutical interventions on curtailing the 2019 novel Coronavirus, , http://dx.doi.org/10.1101/2020.04.15.20066480
, 2016, Self-Propelled Pedestrian Dynamics Model: Application to Passenger Movement and Infection Propagation in Airplanes, , http://dx.doi.org/10.48550/arxiv.1603.08380
https://orcid.org/0000-0001-5100-9724