Select Publications

Book Chapters

Ma DK G;Stolte C;Kaur S;Bain M;O Donoghue SI, 2015, 'Visual analytics of signalling pathways using time profiles', in Advances in Experimental Medicine and Biology, pp. 3 - 22, http://dx.doi.org/10.1007/978-3-319-10984-8_1

Papapetrou P;Pizzato LA;Gionis A;Cai X;Bain M;Berkovsky S;Garriga G;Guy I;Gunopulos D;Hollmen J;Kay J;Koprinska I;Kronman U;Lappas T;Mahidadia A;Nayak R;Pasanen I;Petricek V;Potamias M;Terzi E;Wobcke W;Yacef K;Amer-Yahia S, 2011, 'Preface', in Proceedings - IEEE International Conference on Data Mining, ICDM, http://dx.doi.org/10.1109/ICDMW.2011.192

Ben-Naim D;Velan GM;Marcus N;Bain M, 2010, 'Adaptive Tutorials for Virtual Microscopy: A Design Paradigm to Promote Pedagogical Ownership.', in Aleven V;Kay J;Mostow J (ed.), Intelligent Tutoring Systems 10th International Conference, ITS 2010, Pittsburgh, PA, USA, June 14-18, 2010, Proceedings, Springer Science & Business Media, pp. 266 - 268, http://dx.doi.org/10.1007/978-3-642-13437-1_40

Bain M, 2010, 'Structured Induction.', in Sammut C;Webb GI (ed.), Encyclopedia of Machine Learning, Springer, pp. 930 - 933, https://doi.org/10.1007/978-0-387-30164-8

Journal articles

Heap B;Bain M;Wobcke W;Krzywicki A;Schmeidl S, 2017, 'Word Vector Enrichment of Low Frequency Words in the Bag-of-Words Model for Short Text Multi-class Classification Problems.', CoRR, vol. abs/1709.05778

Krzywicki A;Wobcke W;Bain M;Calvo Martinez J;Compton P, 2016, 'Data mining for building knowledge bases: Techniques, architectures and applications', Knowledge Engineering Review, vol. 31, pp. 97 - 123, http://dx.doi.org/10.1017/S0269888916000047

Masson B;Bain M;Page J, 2015, 'Large Aircraft Engine-Out Takeoff Path Optimization', Journal of Aerospace Operations

Wobcke W;Krzywicki A;Kim YS;Cai X;Bain M;Compton P;Mahidadia A, 2015, 'A Deployed People-to-People Recommender System in Online Dating', AI MAGAZINE, vol. 36, pp. 5 - 18, http://dx.doi.org/10.1609/aimag.v36i3.2599

Krzywicki A;Wobcke W;Kim YS;Cai X;Bain M;Mahidadia A;Compton P, 2015, 'Collaborative filtering for people-to-people recommendation in online dating: Data analysis and user trial', International Journal of Human Computer Studies, vol. 76, pp. 50 - 66, http://dx.doi.org/10.1016/j.ijhcs.2014.12.003

Akand E;Bain M;Temple M, 2010, 'Learning with gene ontology annotation using feature selection and construction', Applied Artificial Intelligence, vol. 24, pp. 5 - 38, http://dx.doi.org/10.1080/08839510903448627

Kadupitige SR;Leung KC;Sellmeier J;Sivieng J;Catchpoole DR;Bain ME;Gaëta BA, 2009, 'MINER: Exploratory analysis of gene interaction networks by machine learning from expression data', BMC Genomics, vol. 10

Gaëta BA;Malming HR;Jackson KJ L;Bain ME;Wilson P;Collins AM, 2007, 'iHMMune-align: Hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences', Bioinformatics, vol. 23, pp. 1580 - 1587, http://dx.doi.org/10.1093/bioinformatics/btm147

Lee CE H;Gaëta B;Malming HR;Bain ME;Sewell WA;Collins AM, 2006, 'Reconsidering the human immunoglobulin heavy-chain locus: 1. An evaluation of the expressed human IGHD gene repertoire', Immunogenetics, vol. 57, pp. 917 - 925, http://dx.doi.org/10.1007/s00251-005-0062-5

Srinivasan A;King RD;Bain ME, 2004, 'An empirical study of the use of relevance information in inductive logic programming', Journal of Machine Learning Research, vol. 4, pp. 369 - 383, http://dx.doi.org/10.1162/153244304773633861

Bain ME;Furukawa K;Ueno K, 2001, 'Motor Skill as Dynamic Constraint Satisfaction', Electronic Transactions on Artificial Intelligence, pp. 79 - 92

Conference Papers

Vig L;Srinivasan A;Bain M;Verma A, 2018, 'An investigation into the role of domain-knowledge on the use of embeddings', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 169 - 183, http://dx.doi.org/10.1007/978-3-319-78090-0_12

Heap B;Krzywicki A;Schmeidl S;Wobcke W;Bain M, 2017, 'A joint human/machine process for coding events and conflict drivers', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 639 - 654, http://dx.doi.org/10.1007/978-3-319-69179-4_45

Srinivasan A;Bain M;Vatsa D;Agarwal S, 2016, 'Identification of transition models of biological systems in the presence of transition noise', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 200 - 214, http://dx.doi.org/10.1007/978-3-319-40566-7_14

Alanazi AS;Bain ME, 2016, 'A Scalable People-to-People Hybrid Reciprocal Recommender Using Hidden Markov Models', in 2nd International Workshop on Machine Learning Methods for Recommender Systems, International Workshop on Machine Learning Methods for Recommender Systems, Miami, Florida, USA, presented at International Workshop on Machine Learning Methods for Recommender Systems, Miami, Florida, USA, 05 - 07 May 2016

Masson B;Bain M;Page J, 2015, 'Diverging engine failure paths on standard instrument departures', in AIAA Guidance, Navigation, and Control Conference, 2013

Masson B;Bain M;Page J, 2015, 'Diverging engine failure paths on standard instrument departures', in AIAA Guidance, Navigation, and Control Conference, 2013

Masson B;Bain M;Page J, 2015, 'Diverging engine failure paths on standard instrument departures', in AIAA Guidance, Navigation, and Control Conference 2015, MGNC 2015 - Held at the AIAA SciTech Forum 2015

Masson B;Page J, 2015, 'Runway and Terrain Classification and effect on Engine Out Takeoff Paths', in Runway and Terrain Classification and effect on Engine Out Takeoff Paths, APISAT 2015, Cairns, presented at APISAT 2015, Cairns, 25 - 27 November 2015

Masson B;Bain M;Page J, 2015, 'Is Engine Failure on the Runway at Takeoff the most limiting case?', in AIAC16, Australian International Aerospace Conference, Melbourne, Vic, presented at Australian International Aerospace Conference, Melbourne, Vic, 23 - 25 February 2015, http://search.informit.org/documentSummary;dn=254530517802743;res=IELENG;subject=Law

Heap B;Krzywicki A;Wobcke W;Bain M;Compton P, 2014, 'Combining career progression and profile matching in a job recommender system', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 396 - 408, http://dx.doi.org/10.1007/978-3-319-13560-1

Krzywicki A;Wobcke W;Kim YS;Cai X;Bain M;Compton P;Mahidadia A, 2014, 'Evaluation and deployment of a people-to-peopie recommender in online dating', in Proceedings of the National Conference on Artificial Intelligence, pp. 2914 - 2921

Ma DK G;Stolte C;Kaur S;Bain M;O'Donoghue SI, 2013, 'Visual analytics of phosphorylation time-series data on insulin response', in AIP Conference Proceedings, pp. 185 - 196, http://dx.doi.org/10.1063/1.4825010

Alanazi A;Bain M, 2012, 'Ranking interaction-based collaborative filtering recommendations using temporal features in online dating', in Innovation and Sustainable Competitive Advantage: From Regional Development to World Economies - Proceedings of the 18th International Business Information Management Association Conference, pp. 450 - 457

Masson B;Bain M;Page J, 2012, 'Engine-out takeoff path optimization out of terrain challenging airports', in 28th Congress of the International Council of the Aeronautical Sciences 2012, ICAS 2012, pp. 3174 - 3183

Srinivasan A;Bain M, 2012, 'Knowledge-guided identification of petri net models of large biological systems', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 317 - 331, http://dx.doi.org/10.1007/978-3-642-31951-8_27

Masson B;Bain M;Page J, 2011, 'Large aircraft takeoff path optimization out of terrain challenging airports', in 14th Australian International Aerospace Congress, AIAC 2011

Masson B;Bain M;Page J, 2011, 'Engine-out takeoff path optimization out of terrain challenging airports', in AIAA Guidance, Navigation, and Control Conference 2011

Bain ME, 2010, 'Cygnus: Back to the future - Applying commercial program lessons learned', in AIAA SPACE Conference and Exposition 2010

Ben-Naim D;Velan G;Marcus N;Bain M, 2010, 'Adaptive tutorials for virtual microscopy: A design paradigm to promote pedagogical ownership', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 266 - 268, http://dx.doi.org/10.1007/978-3-642-13437-1_40

Kim YS;Mahidadia A;Compton P;Cai X;Bain M;Krzywicki A;Wobcke W, 2010, 'People recommendation based on aggregated bidirectional intentions in social network site', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 247 - 260, http://dx.doi.org/10.1007/978-3-642-15037-1_21

Krzywicki A;Wobcke W;Cai X;Mahidadia A;Bain M;Compton P;Kim YS, 2010, 'Interaction-based collaborative filtering methods for recommendation in online dating', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 342 - 356, http://dx.doi.org/10.1007/978-3-642-17616-6_31

Ben-Naim D;Bain M;Marcus N, 2009, 'A user-driven and data-driven approach for supporting teachers in reflection and adaptation of adaptive tutorials', in EDM'09 - Educational Data Mining 2009: 2nd International Conference on Educational Data Mining, pp. 21 - 30

Xu M;Bain M, 2009, 'Mining minimal constrained flow cycles from complex transaction data', in Conferences in Research and Practice in Information Technology Series, pp. 151 - 158

Velan GM;Ben-Naim D;Kumar RK;Bain ME;Kan BF;Marcus N, 2009, 'Adaptive tutorials using virtual slides to enhance learning of microscopic morphology', in Proceedings of World Conference on E-Learning in Corporate, Government, Healthcare, and Higher Education 2009, Association for the Advancement of Computing in Education, Chesapeake, VA, 01 January 2009, http://www.editlib.org/p/32546

Ben-Naim D;Marcus N;Bain M, 2008, 'Visualization and analysis of student interactions in an adaptive exploratory learning environment', in CEUR Workshop Proceedings

Akand EH;Bain ME, 2007, 'Learning from ontological annotation: an application of formal concept analysis to feature construction in the gene ontology', in Australasian ontology workshop 2007, Australasian ontology workshop 2007, Gold Coast, Qld, presented at Australasian ontology workshop 2007, Gold Coast, Qld, 02 December 2007

Ben-Naim D;Marcus N;Bain ME, 2007, 'Virtual apparatus approach to constructing adaptive tutorials', in 2007 international conference on e-learning, e-business, enterprise information systems, and e-government, International Conference on Foundations of Computer Science, Las, Vegas, Nevada, USA, presented at International Conference on Foundations of Computer Science, Las, Vegas, Nevada, USA, 25 - 28 June 2007, http://www.adaptiveelearning.com/papers/vaf4at.pdf

Bain ME;Ahsan N;Potter JM;Gaeta BA;Temple MD;Dawes IW, 2006, 'Learning causal networks from microarray data', in Workshop on Intelligent systems for bioinformatics, 2006, Workshop on Intelligent systems for bioinformatics, 2006, Hobart, presented at Workshop on Intelligent systems for bioinformatics, 2006, Hobart, 04 December 2006

Bain M, 2004, 'Predicate invention and the revision of first-order concept lattices', in Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science), pp. 329 - 336

Reidsema CA;Bain ME;Raju J;Kelly DW, 2004, 'A knowledge acquisition approach for composite aerospace component design.', in 5th Asia-Pacific Industrial Engineering and Management Systems Conference, 5th Asia-Pacific Industrial Engineering and Management Systems Conference, Gold Coast, Qld, presented at 5th Asia-Pacific Industrial Engineering and Management Systems Conference, Gold Coast, Qld, 12 - 15 December 2004

Bain M, 2003, 'Inductive construction of ontologies from formal concept analysis', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 88 - 99

Bain ME;Gaeta BA, 2003, 'Learning Quantitative Gene Interactions from Microarray Data', in 2003 Congress on Evolutionary Computation CEC 2003, IEEE Congress on Evolutionary Computation (CEC 2003), Canberra, presented at IEEE Congress on Evolutionary Computation (CEC 2003), Canberra, 08 - 12 December 2003

Bain ME, 2003, 'Learning Ontologies from Concept Lattices', in ICCS 2003 - International Conference on Conceptual Structures, International Conference on Conceptual Structures ICCS 2003, Dresden, Germany, presented at International Conference on Conceptual Structures ICCS 2003, Dresden, Germany, 21 - 25 July 2003

Bain M, 2002, 'Structured features from concept lattices for unsupervised learning and classification', in Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science), pp. 557 - 568

Bain ME, 2002, 'Revising Concept Lattices To Extract Concept Definitions', in PKAW 2002: The 2002 Pacific Rim Knowledge Acquisition Workshop, PKAW 2002: The 2002 Pacific Rim Knowledge Acquisition Workshop, Tokyo, Japan, presented at PKAW 2002: The 2002 Pacific Rim Knowledge Acquisition Workshop, Tokyo, Japan, 18 - 19 August 2002


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