Select Publications
Book Chapters
Ma D; Stolte C; Kaur S; Bain M; O Donoghue S, 2015, 'Visual Analytics of Signalling Pathways Using Time Profiles', in Sun C; Bednarz T; Pham T; Vallotton P; Wang D (ed.), Signal and Image Analysis for Biomedical and Life Sciences, Springer, http://dx.doi.org/10.1007/978-3-319-10984-8_1
Journal articles
Wobcke W; Krzywicki A; Kim YS; Cai X; Bain M; Compton P; Mahidadia A, 2015, 'Deployment of a People-to-People Recommender System in Online Dating', AI Magazine
Akand E; Bain M; Temple M, 2010, 'LEARNING WITH GENE ONTOLOGY ANNOTATION USING FEATURE SELECTION AND CONSTRUCTION', Applied Artificial Intelligence: an international journal, vol. 24, no. 1-2, pp. 5 - 38, http://dx.doi.org/10.1080/08839510903448627
Kadupitige SR; Leung KC; Sellmeier J; Sivieng J; Catchpoole DR; Bain ME; Gaëta BA, 2009, 'MINER: exploratory analysis of gene interaction networks by machine learning from expression data.', BMC Genomics, vol. 10 Suppl 3, pp. S17, http://dx.doi.org/10.1186/1471-2164-10-s3-s17
Gaëta BA; Malming HR; Jackson KJ; Bain ME; Wilson P; Collins AM, 2007, 'iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences.', Bioinformatics, vol. 23, no. 13, pp. 1580 - 1587, http://dx.doi.org/10.1093/bioinformatics/btm147
Lee CE; Gaëta B; Malming HR; Bain ME; Sewell WA; Collins AM, 2006, 'Reconsidering the human immunoglobulin heavy-chain locus: 1. An evaluation of the expressed human IGHD gene repertoire.', Immunogenetics, vol. 57, no. 12, pp. 917 - 925, http://dx.doi.org/10.1007/s00251-005-0062-5
Srinivasan A; King R; Bain ME, 2003, 'An Empirical Study of the use of Relevance Information in Inductive Logic Programming', Journal of Machine Learning Research, vol. 4, pp. 369 - 383
Bain ME; Furukawa K; Ueno K, 2001, 'Motor Skill as Dynamic Constraint Satisfaction', Electronic Transactions on Artificial Intelligence, pp. 79 - 92
Conference Papers
Masson B; Bain M; Page J, 2015, 'Diverging Engine Failure Paths on Standard Instrument Departures', presented at AIAA SciTech Conference, Kissimmee, Florida, USA, 5 - 9 January 2015
Heap B; Krzywicki A; Wobcke W; Bain M; Compton P, (eds.), 2014, 'Combining Career Progression and Profile Matching in a Job Recommender System', in PRICAI 2014: Trends in Artificial Intelligence, Springer
Alanazi A; Bain ME, 2012, 'Ranking Interaction-Based Collaborative Filtering Recommendations Using Temporal Features in Online Dating', in Ranking Interaction-Based Collaborative Filtering Recommendations Using Temporal Features in Online Dating, International Business Information Management Association, 18th IBIMA Conference, pp. 450 - 457, presented at The 18th IBIMA Conference on Innovation and Sustainable Economic Competitive Advantage, Istanbul, Turkey, 9 - 10 May 2012
Masson B; Bain ME; Page JR, (ed.), 2012, 'Engine-Out Takeoff Path Optimization out of Terrain Challenging Airports', in AIAA Guidance, Navigation and Control Conference, presented at AIAA Guidance and Navigation Control, Portland, Oregon, USA, 8 - 11 August 2011
Srinivasan A; Bain ME, 2012, 'Knowledge-Guided Identification of Petri Net Models of Large Biological Systems', in Lecture Notes in Computer Science Volume 7207, Springer, Berlin, pp. 317 - 331, presented at 21st International Conference on Inductive Logic Programming, Windsor, England, UK, 1 - 3 August 2011, http://dx.doi.org/10.1007/978-3-642-31951-8_27
Masson B; Bain ME; Page JR, 2011, 'Large aircraft takeoff path optimization out of terrain challenging airports', in Fourteenth Australian Aeronautical Conference, Royal Aeronautical Society (Australian Divison) / Engineers Australia, Australia, pp. 249 - 258, presented at 14th Australian International Aerospace Congress, Melbourne, 1 January 2011
Krzywicki A; Wobcke W; Cai X; Mahidadia AJ; Bain ME; Compton PJ; Kim YS, 2010, 'Interaction-based collaborative filtering methods for recommendation in online dating', in Web Information Systems Engineering - WISE 2010, Springer, Germany, pp. 342 - 356, presented at 11th International Conference on Web Information Systems Engineering, WISE 2010, Hong Kong, 12 - 14 December 2010, http://dx.doi.org/10.1007/978-3-642-17616-6_31
Kim YS; Mahidadia AJ; Compton PJ; Cai X; Bain ME; Krzywicki A; Wobcke W, 2010, 'People Recommendation based on Aggregated Bidirectional Intentions in Social Network Site', in AICI - Lecture Notes in Computer Science, Springer, Germany, pp. 247 - 260, presented at The 11th International Workshop on Knowledge Management and Acquisition for Smart Systems and Services (PKAW 2010), Daegu, 31 August - 3 September 2010, http://dx.doi.org/10.1007/978-3-642-15037-1_21
Ben-Naim D; Velan GM; Marcus N; Bain ME, 2010, 'Adaptive Tutorials for Virtual Microscopy: A Design Paradigm to Promote Pedagogical Ownership', in Intelligent Tutoring Systems - Lecture Notes in Computer Science Volume 6095 Part II, Springer, Berlin / Heidelberg, pp. 266 - 268, presented at 10th International Conference on Intelligent Tutoring Systems, Pittsburgh, PA, USA, 14 - 18 June 2010, http://dx.doi.org/10.1007/978-3-642-13437-1_40
Xu M; Bain ME, 2009, 'Mining minimal constrained flow cycles from complex transaction data', in Conferences on Research and Practice in Information Technology Volume 101, Australian Computer Society, Adelaide, SA, presented at 8th Australian Data Mining Conference, Melbourne, 1 December 2009
Ben-Naim D; Bain ME; Marcus N, 2009, 'A User-Driven and Data-Driven Approach for Supporting Teachers in Reflection and Adaptation of Adaptive Tutorials', in Educational Data Mining 2009: 2nd International Conference on Educational Data Mining, Proceedings, presented at 2nd International Conference on Educational Data Mining, CORDOBA, SPAIN, 1 July 2009
Velan GM; Ben-Naim D; Kumar RK; Bain ME; Kan BF; Marcus N, 2009, 'Adaptive tutorials using virtual slides to enhance learning of microscopic morphology', in Proceedings of World Conference on E-Learning in Corporate, Government, Healthcare, and Higher Education 2009, Association for the Advancement of Computing in Education, Chesapeake, VA, 1 January 2009
Ben-Naim D; Marcus N; Bain ME, 2008, 'Visualization and Analysis of Student Interactions in an Adaptive Exploratory Learning Environment', in CEUR Workshop Proceedings, presented at European Conference of Technology Enhanced Learning, Maastricht, Netherlands, 16 - 18 September 2008
Akand EH; Bain ME, 2007, 'Learning from ontological annotation: an application of formal concept analysis to feature construction in the gene ontology', in Australasian ontology workshop 2007, presented at Australasian ontology workshop 2007, Gold Coast, Qld, 2 December 2007
Ben-Naim D; Marcus N; Bain ME, 2007, 'Virtual apparatus approach to constructing adaptive tutorials', in 2007 international conference on e-learning, e-business, enterprise information systems, and e-government, presented at International Conference on Foundations of Computer Science, Las, Vegas, Nevada, USA, 25 - 28 June 2007
Bain ME; Ahsan N; Potter JM; Gaeta BA; Temple MD; Dawes IW, 2006, 'Learning causal networks from microarray data', in Workshop on Intelligent systems for bioinformatics, 2006, presented at Workshop on Intelligent systems for bioinformatics, 2006, Hobart, 4 December 2006
Bain ME, 2004, 'Predicate invention and the revision of first-order concept lattices', in Proceedings of the First International Conference on Advances in Natural Computation (ICNC 2005), Part III, Lecture Notes in Computer Science 3612/2005, Springer, Berlin, Germany, presented at Concept Lattices 2004, Sydney, 23 - 26 February 2004
Reidsema CA; Bain ME; Raju J; Kelly DW, 2004, 'A knowledge acquisition approach for composite aerospace component design.', in 5th Asia-Pacific Industrial Engineering and Management Systems Conference, presented at 5th Asia-Pacific Industrial Engineering and Management Systems Conference, Gold Coast, Qld, 12 - 15 December 2004
Bain ME; Gaeta BA, 2003, 'Learning Quantitative Gene Interactions from Microarray Data', in 2003 Congress on Evolutionary Computation CEC 2003, presented at IEEE Congress on Evolutionary Computation (CEC 2003), Canberra, 8 - 12 December 2003
Bain ME, 2003, 'Learning Ontologies from Concept Lattices', in ICCS 2003 - International Conference on Conceptual Structures, presented at International Conference on Conceptual Structures ICCS 2003, Dresden, Germany, 21 - 25 July 2003
Bain ME, 2003, 'Inductive Construction of Ontologies from Formal Concept Analysis', in 16th Australian Conference on Artificial Intelligence, presented at 16th Australian joint conference on artificial intelligence - AI`03, Perth, WA, 3 - 5 December 2003
Bain ME, 2002, 'Structured Features From Concept Lattices For Unsupervised Learning And Classification', in AI 2002: Advances in Artificial Intelligence, Springer-Verlag, Berlin, presented at Australasian Joint Conference on Artificial Intelligence 2002, Canberra, 2 - 6 December 2002
Bain ME, 2002, 'Revising Concept Lattices To Extract Concept Definitions', in PKAW 2002: The 2002 Pacific Rim Knowledge Acquisition Workshop, presented at PKAW 2002: The 2002 Pacific Rim Knowledge Acquisition Workshop, Tokyo, Japan, 18 - 19 August 2002
Muggleton SH; Bain ME, 1999, 'Analogical Prediction', in 9th International Conference onInductive Logic Programming (ILP 1999), presented at 9th International Conference onInductive Logic Programming (ILP`99), Bled, Slovenia, 24 - 27 June 1999
Reports
Srinivasan A; Bain M, 2014, Identification of Transition-Based Models of Biological Systems using Logic Programming, University of New South Wales, UNSW-CSE-TR-201425
Srinivasan A; Bain M, 2014, An Empirical Study of On-Line Models for Relational Data Streams, University of New South Wales, UNSW-CSE-TR-201401