By Dr Valerie Wasinger

Journal articles

Yau Y; Leong RW; Zeng M; Wasinger VC, 2013, 'Proteomics and metabolomics in inflammatory bowel disease', Journal of Gastroenterology and Hepatology (Australia), 28, pp. 1076 - 1086, http://dx.doi.org/10.1111/jgh.12193

You J; Willcox MD; Madigan MC; Wasinger V; Schiller B; Walsh BJ; Graham PH; Kearsley JH; Li Y, 2013, 'Tear Fluid Protein Biomarkers', , 62, pp. 151 - 196, http://dx.doi.org/10.1016/B978-0-12-800096-0.00004-4

Wasinger VC; Zeng M; Yau Y, 2013, 'Current status and advances in quantitative proteomic mass spectrometry.', Int J Proteomics, 2013, pp. 180605, http://dx.doi.org/10.1155/2013/180605

Yau Y; Leong RW; Wasinger VC, 2013, 'Mo1269 Increased Levels of Serum Fatty Acid Binding Protein 5 in Fistulizng Crohn's Disease Found by Novel Proteotypic Peptide Monitoring', Gastroenterology, 144, pp. S - 623, http://dx.doi.org/10.1016/s0016-5085(13)62302-1

Yau Y; Leong RW; Wasinger VC, 2012, 'Enrichment of epithelial intermediate filament proteins in Crohn's disease sera associated with disease behaviour phenotype and disease activity', JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 27, pp. 28 - 29, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000308642600061&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Ly L; Wasinger VC, 2011, 'Protein and peptide fractionation, enrichment and depletion: tools for the complex proteome', Proteomics, 11, pp. 513 - 534

Yau Y; Shin SS; Bustamante S; Pickford R; Leong RW; Wasinger VC, 2011, 'Tryptophan Metabolome Signature Differences in Inflammatory Bowel Diseases', Gastroenterology, 140, pp. S - 840, http://dx.doi.org/10.1016/s0016-5085(11)63487-2

Bustamante S; Pickford R; Shin S; Luber R; Campbell B; Redmond D; Yau Y; Leong RWL; Wasinger V, 2010, 'Metabolomics in inflammatory bowel disease', JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 25, pp. A83 - A83, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000283321200226&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Ly L; Wasinger VC, 2010, 'Mass and charge selective protein fractionation for the differential analysis of T-cell and CD34+ stem cell proteins from cord blood', Journal of Proteomics, 73, pp. 571 - 578

You J; Fitzgerald A; Cozzi PJ; Zhao Z; Graham P; Russell PJ; Walsh BJ; Willcox M; Zhong L; Wasinger V; Li Y, 2010, 'Post‐translation modification of proteins in tears', PROTEOMICS – Clinical Applications, 4, pp. 870 - 870, http://dx.doi.org/10.1002/prca.201090087

Zhao Z; Liu J; Wasinger VC; Malouf T; Nguyen-Khuong T; Walsh B; Willcox MD, 2010, 'Tear lipocalin is the predominant phosphoprotein in human tear fluid', Experimental Eye Research, 90, pp. 344 - 349

Ly L; Wasinger VC, 2008, 'Peptide enrichment and protein fractionation using selective electrophoresis', Proteomics, 8, pp. 4197 - 4208

Wasinger VC; Ly L; Fitzgerald A; Walsh B, 2008, 'Prefractionation, Enrichment, Desalting and Depleting of Low Volume and Low Abundance Proteins and Peptides Using the MF10', Methods in Molecular Biology, Two Dimensional Electrophoresis Protocols, 424, pp. 257 - 275

Corthals GL; Wasinger VC; Goodlett DR, 2007, 'Analysis of Phosphopeptides by {micro}LC-ESI-MS/MS.', CSH Protoc, 2007, pp. pdb.prot4625, http://dx.doi.org/10.1101/pdb.prot4625

Corthals GL; Wasinger VC; Goodlett DR, 2007, 'Offline Micro-IMAC Enrichment of Phosphoproteins.', CSH Protoc, 2007, pp. pdb.prot4624, http://dx.doi.org/10.1101/pdb.prot4624

Vitali B; Turroni S; Dal Piaz F; Candela M; Wasinger VC; Brigidi P, 2007, 'Genetic and proteomic characterization of rifaximin resistance in Bifidobacterium infantis BI07', Research in Microbiology, 158, pp. 355 - 362

McCann L; Haywood M; Ren B; Simpson AM; Guilhaus M; Wasinger VC; Raftery MJ; Davey R, 2007, 'Identification of Vascular Surface Proteins by in Vivo Biotinylation: A Method Sufficiently Sensitive To Detect Changes in Rat Liver 2 Weeks After Partial Hepatectomy', Journal of Proteome Research, 6, pp. 3108 - 3113

Wasinger V, 2006, 'Holistic biology of microorganisms: Genomics, transcriptomics, and proteomics', Methods of Biochemical Analysis, 49, pp. 3 - 14

Ping P; Vondriska T; Creighton C; Gandhi T; Yang Z; Menon R; Kwon M; Cho S; Drwal G; Kellmann M; Peri S; Suresh S; Gronborg M; Molina H; Chaerkady R; Rekha B; Shet A; Gerszten R; Wu H; Raftery MJ; Wasinger VC; Schulz-Knappe P; Hanash S; Paik Y; Hancock W; States D; Omenn G; Pandey A, 2005, 'A functional annotation of subproteomes in human plasma', Proteomics, 5, pp. 3506 - 3519

Vitali B; Wasinger VC; Brigidi P; Guilhaus M, 2005, 'A proteomic view of Bifidobacterium infantis generated by multi-dimensional chromatography coupled with tandem mass spectrometry', Proteomics, 5, pp. 1859 - 1867

Larance MC; Ramm GA; Stockli J; Van Dam EM; Winata SC; Wasinger VC; Simpson F; Graham M; Junutula J; Guilhaus M; James DE, 2005, 'Characterization of the role of the Rab GTPase-activating protein AS160 in insulin-regulated GLUT4 trafficking', The Journal of Biological Chemistry, 280, pp. 37803 - 37813

Omenn G; States D; Adamski M; Blackwell T; Menon R; Hermjakob H; Apweiler R; Haab B; Simpson R; Eddes J; Kapp E; Moritz R; Chan DJ; Rai A; Admon A; Aebersold R; Eng JJ; Hancock W; Hefta S; Meyer H; Paik Y; Yoo J; Ping P; Pounds J; Adkins J; Qian X; Wang R; Wasinger VC; Wu C; Zhao X; Zeng R; Archakov A; Tsugita A; Beer I; Pandey A; Pisano M; Andrews PJ; Tammen H; Speicher D; Hanash S, 2005, 'Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database', Proteomics, 5, pp. 3226 - 3245

Larance MC; Klopcic B; Wasinger VC, 2005, 'Proteomics: An overview', Inflammatory Bowel Diseases, 11, pp. 927 - 936

Wasinger VC; Locke VL; Raftery MJ; Larance MC; Rothemund DL; Liew A; Bate I; Guilhaus M, 2005, 'Two-dimensional liquid chromatography/tandem mass spectrometry analysis of Gradiflow (TM) fractionated native human plasma', Proteomics, 5, pp. 3397 - 3401

Burchfield JG; Lennard A; Narasimhan S; Hughes WE; Wasinger VC; Corthals GL; Okuda T; Kondoh H; Biden TJ; Schmitz-Peiffer et A, 2004, 'Akt Mediates Insulin-stimulated Phosphorylation of Ndrg2: evidence for cross-talk with protein kinase C θ', The Journal of Biological Chemistry, 279, pp. 18623 - 18632, http://www.sciencedirect.com/science/article/B6WPV-4CJT94G-2YX/2/8e96d5728ca79a495aa6ff34cc71ecc2

Henness S; Davey M; Harvie R; Banyer J; Wasinger VC; Corthals GL; Davey R, 2004, 'Changes in gene expression associated with stable drug and radiationresistance in small cell lung cancer cells are similar to those causedby a single X-ray dose', Radiation Research, 161, pp. 495 - 503

Ostrowski ML; Fegatella F; Wasinger VC; Guilhaus M; Corthals GL; Cavicchioli R, 2004, 'Cross-species identification of proteins from proteome profiles of the marine oligotrophic ultramicrobacterium, Sphingopyxis alaskensis', Proteomics, 4, pp. 1779 - 1788

Diaz P; Zilm P; Wasinger VC; Corthals GL; Rogers A, 2004, 'Studies on NADH oxidase and alkyl hydroperoxide reductase produced byPorphyromonas gingivalis', Oral Microbiology and Immunology, 19, pp. 137 - 143

Lynch DK; Winata SC; Lyons RJ; Hughes WE; Lehrbach GM; Wasinger VC; Corthals GL; Cordwell SJ; Daly RJ, 2003, 'A cortactin/CD2-associated protein (CD2AP) complex provides a novel link between epidermal growth factor receptor endocytosis and the actin cytoskeleton', The Journal of Biological Chemistry, 278, pp. 21805 - 21813

Rothemund DL; Locke VL; Liew A; Thomas TM; Wasinger VC; Rylatt DB, 2003, 'Depletion of the highly abundant protein albumin from human plasma using the Gradiflow', Proteomics, 31, pp. 279 - 287

Wasinger VC; Corthals GL, 2002, 'Proteomic tools for biomedicine', Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 771, pp. 33 - 48, http://dx.doi.org/10.1016/S1570-0232(02)00125-3

Wasinger VC; Dennis Pollack J; Humphery-Smith I, 2000, 'The proteome of Mycoplasma genitalium: Chaps-soluble component', European Journal of Biochemistry, 267, pp. 1571 - 1582, http://dx.doi.org/10.1046/j.1432-1327.2000.01183.x

Corthals CL; Wasinger VC; Hochstrasser DF; Sanchez JC, 2000, 'The dynamic range of protein expression: A challenge for proteomic research', Electrophoresis, 21, pp. 1104 - 1115, http://dx.doi.org/10.1002/(SICI)1522-2683(20000401)21:6<1104::AID-ELPS1104>3.0.CO;2-C

Wasinger VC; Urquhart BL; Humphery-Smith I, 1999, 'Cross-species characterisation of abundantly expressed Ochrobactrum anthropi gene products', Electrophoresis, 20, pp. 2196 - 2203, http://dx.doi.org/10.1002/(SICI)1522-2683(19990801)20:11<2196::AID-ELPS2196>3.0.CO;2-V

Wasinger VC; Humphery-Smith I, 1998, 'Small genes/gene-products in Escherichia coli K-12', FEMS Microbiology Letters, 169, pp. 375 - 382, http://dx.doi.org/10.1016/S0378-1097(98)00507-2

Wasinger V, 1998, 'Small genes/gene-products in Escherichia coli K-12', FEMS Microbiology Letters, 169, pp. 375 - 382, http://dx.doi.org/10.1016/s0378-1097(98)00507-2

Rudd KE; Humphery-Smith I; Wasinger VC; Bairoch A, 1998, 'Low molecular weight proteins: A challenge for post-genomic research', Electrophoresis, 19, pp. 536 - 544, http://dx.doi.org/10.1002/elps.1150190413

Cordwell SJ; Wasinger VC; Poljak A; Duncan MW; Humphery-Smith I, 1997, 'Conserved motifs as the basis for recognition of homologous proteins across species boundaries using peptide-mass fingerprinting', Journal of Mass Spectrometry, pp. 370 - 380

Wasinger VC; Cordwell SJ; Poljak A; Yan JX; Gooley AA; Wilkins MR; Duncan MW; Harris RI; Williams KM; Humphery-Smith I, 1995, 'Progress with gene-product mapping of the mollicutes: mycroplasma genitalium', Electrophoresis, 16, pp. 1090 - 1094

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