Select Publications

Journal articles

Wasinger VC; Lu K; Yau YY; Nash J; Lee J; Chang J; Paramsothy S; Kaakoush NO; Mitchell HM; Leong RWL, 2020, 'Spp24 is associated with endocytic signalling, lipid metabolism, and discrimination of tissue integrity for ‘leaky-gut’ in inflammatory bowel disease', Scientific Reports, vol. 10,

Wasinger VC; Curnoe D; Boel C; Machin N; Goh HM, 2020, 'The Molecular Floodgates of Stress-Induced Senescence Reveal Translation, Signalling and Protein Activity Central to the Post-Mortem Proteome', International Journal of Molecular Sciences, vol. 21, pp. 6422 - 6422,

Leong RWL; Kaakoush NO; Yau YY; Wasinger VC, 2019, 'Editorial: metabolomic biomarkers for colorectal adenocarcinoma and in the differentiation between irritable bowel syndrome and ulcerative colitis in clinical remission-confounded by the gut microbiome?', Alimentary pharmacology & therapeutics, vol. 49, pp. 1086 - 1087,

Wasinger VC; Curnoe D; Bustamante S; Mendoza R; Shoocongdej R; Adler L; Baker A; Chintakanon K; Boel C; Tacon PSC, 2019, 'Analysis of the Preserved Amino Acid Bias in Peptide Profiles of Iron Age Teeth from a Tropical Environment Enable Sexing of Individuals Using Amelogenin MRM', Proteomics, vol. 19, pp. e1800341,

Feng X; Bai X; Ni J; Wasinger VC; Beretov J; Zhu Y; Graham P; Li Y, 2019, 'CHTOP in chemoresistant epithelial ovarian cancer: A novel and potential therapeutic target', Frontiers in Oncology, vol. 9,

Lee JY; Wasinger VC; Yau YY; Chuang E; Yajnik V; Leong RWL, 2018, 'Molecular pathophysiology of epithelial barrier dysfunction in inflammatory bowel diseases', Proteomes, vol. 6,

Wu D; Ni J; Beretov J; Cozzi P; Willcox M; Wasinger V; Walsh B; Graham P; Li Y, 2017, 'Urinary biomarkers in prostate cancer detection and monitoring progression', Critical Reviews in Oncology/Hematology, vol. 118, pp. 15 - 26,

Chang J; Leong RW; Wasinger VC; Ip M; Yang M; Phan TG, 2017, 'Impaired Intestinal Permeability Contributes to Ongoing Bowel Symptoms in Patients With Inflammatory Bowel Disease and Mucosal Healing', Gastroenterology, vol. 153, pp. 723 - 731.e1,

Mourad FH; Yau Y; Wasinger VC; Leong RW, 2017, 'Proteomics in Inflammatory Bowel Disease: Approach Using Animal Models', Digestive Diseases and Sciences, vol. 62, pp. 2266 - 2276,

Yau YY; Leong RWL; Pudipeddi A; Redmond D; Wasinger VC, 2017, 'Serological epithelial component proteins identify intestinal complications in Crohn's disease', Molecular and Cellular Proteomics, vol. 16, pp. 1244 - 1257,

Trist BG; Davies KM; Cottam V; Genoud S; Ortega R; Roudeau S; Carmona A; De Silva K; Wasinger V; Lewis SJG; Sachdev PS; Smith B; Troakes C; Vance C; Shaw C; Al-Sarraj S; Ball HJ; Halliday GM; Hare DJ; Double KL, 2017, 'Amyotrophic lateral sclerosis-like superoxide dismutase 1 proteinopathy is associated with neuronal loss in Parkinson's disease brain', Acta Neuropathologica, vol. 134, pp. 113 - 127,

Chang L; Ni J; Beretov J; Wasinger VC; Hao J; Bucci J; Malouf D; Gillatt D; Graham PH; Li Y, 2017, 'Identification of protein biomarkers and signaling pathways associated with prostate cancer radioresistance using label-free LC-MS/MS proteomic approach', Scientific Reports, vol. 7,

Cochran BJ; Hou L; Manavalan APC; Moore BM; Tabet F; Sultana A; Torres LC; Tang S; Shrestha S; Senanayake P; Patel M; Ryder WJ; Bongers A; Maraninchi M; Wasinger VC; Westerterp M; Tall AR; Barter PJ; Rye K-A, 2017, 'Impact of Perturbed Pancreatic beta-Cell Cholesterol Homeostasis on Adipose Tissue and Skeletal Muscle Metabolism (vol 65, pg 3610, 2016)', DIABETES, vol. 66, pp. 560 - 560,

Cochran BJ; Hou L; Manavalan APC; Moore BM; Tabet F; Sultana A; Torres LC; Tang S; Shrestha S; Senanayake P; Patel M; Ryder WJ; Bongers A; Maraninchi M; Wasinger VC; Westerterp M; Tall AR; Barter PJ; Rye KA, 2016, 'Impact of perturbed pancreatic β-cell cholesterol homeostasis on adipose tissue and skeletal muscle metabolism', Diabetes, vol. 65, pp. 3610 - 3620,

Deng J; Wang L; Ni J; Beretov J; Wasinger V; Wu D; Duan W; Graham P; Li Y, 2016, 'Proteomics discovery of chemoresistant biomarkers for ovarian cancer therapy', Expert Review of Proteomics, vol. 13, pp. 905 - 915,

You J; Willcox M; Fitzgerald A; Schiller B; Cozzi PJ; Russell PJ; Walsh BJ; Wasinger VC; Graham PH; Li Y, 2016, 'Absolute quantification of human tear lactoferrin using multiple reaction monitoring technique with stable-isotopic labeling', Analytical Biochemistry, vol. 496, pp. 30 - 34,

Chan PP; Wasinger VC; Leong RW, 2016, 'Current application of proteomics in biomarker discovery for inflammatory bowel disease.', World J Gastrointest Pathophysiol, vol. 7, pp. 27 - 37,

Wasinger VC; Yau Y; Duo X; Zeng M; Campbell B; Shin S; Luber R; Redmond D; Leong RWL, 2016, 'Low mass blood peptides discriminative of inflammatory bowel disease (IBD) severity: A quantitative proteomic perspective', Molecular and Cellular Proteomics, vol. 15, pp. 256 - 265,

Hao J; Graham P; Chang L; Ni J; Wasinger V; Beretov J; Deng J; Duan W; Bucci J; Malouf D; Gillatt D; Li Y, 2016, 'Proteomic identification of the lactate dehydrogenase A in a radioresistant prostate cancer xenograft mouse model for improving radiotherapy', Oncotarget, vol. 7, pp. 74269 - 74285,

Beretov J; Wasinger VC; Millar EKA; Schwartz P; Graham PH; Li Y, 2015, 'Proteomic analysis of urine to identify breast cancer biomarker candidates using a label-free LC-MS/MS approach', PLoS ONE, vol. 10,

Yau YY; Duo X; Leong RWL; Wasinger VC, 2015, 'Reverse-polynomial dilution calibration methodology extends lower limit of quantification and reduces relative residual error in targeted peptide measurements in blood plasma', Molecular and Cellular Proteomics, vol. 14, pp. 441 - 454,

Frölich S; Shahparee A; Wasinger VC; Wallach M, 2014, 'In vivo localization of antibodies raised against Eimeria maxima wall forming bodies during sexual intracellular development', Parasitology, vol. 141, pp. 1726 - 1735,

Kim PY; Tan O; Diakiw SM; Carter D; Sekerye EO; Wasinger VC; Liu T; Kavallaris M; Norris MD; Haber M; Chesler L; Dolnikov A; Trahair TN; Cheung NK; Marshall GM; Cheung BB, 2014, 'Identification of plasma Complement C3 as a potential biomarker for neuroblastoma using a quantitative proteomic approach', Journal of Proteomics, vol. 96, pp. 1 - 12,

Yau YY; Leong RWL; Shin S; Bustamante S; Pickford R; Hejazi L; Campbell B; Wasinger VC, 2014, 'Bimodal plasma metabolomics strategy identifies novel inflammatory metabolites in inflammatory bowel diseases', Discovery Medicine, vol. 18, pp. 113 - 124

Coumans JVF; Gau D; Poljak A; Wasinger V; Roy P; Moens P, 2014, 'Green fluorescent protein expression triggers proteome changes in breast cancer cells', Experimental Cell Research, vol. 320, pp. 33 - 45,

Coumans JVF; Gau D; Poljak A; Wasinger V; Roy P; Moens PDJ, 2014, 'Profilin-1 overexpression in MDA-MB-231 breast cancer cells is associated with alterations in proteomics biomarkers of cell proliferation, survival, and motility as revealed by global proteomics analyses', OMICS A Journal of Integrative Biology, vol. 18, pp. 778 - 791,

Beretov J; Wasinger VC; Graham PH; Millar EK; Kearsley JH; Li Y, 2014, 'Proteomics for breast cancer urine biomarkers', Advances in Clinical Chemistry, vol. 63, pp. 123 - 167,

Beretov J; Wasinger VC; Schwartz P; Graham PH; Li Y, 2014, 'A standardized and reproducible urine preparation protocol for cancer biomarkers discovery.', Biomark Cancer, vol. 6, pp. 21 - 27,

Lee THY; Mitchell A; Lau SL; An H; Rajeaskariah P; Wasinger V; Raftery M; Bryant K; Tedla N, 2013, 'Glycosylation in a mammalian expression system is critical for the production of functionally active leukocyte immunoglobulin-like receptor A3 protein', Journal of Biological Chemistry, vol. 288, pp. 32873 - 32885,

Cruciani F; Wasinger V; Turroni S; Calanni F; Donders G; Brigidi P; Vitali B, 2013, 'Proteome profiles of vaginal fluids from women affected by bacterial vaginosis and healthy controls: Outcomes of rifaximin treatment', Journal of Antimicrobial Chemotherapy, vol. 68, pp. 2648 - 2659,

Balasubramanian SA; Wasinger VC; Pye DC; Willcox MDP, 2013, 'Preliminary identifcation of differentially expressed tear proteins in keratoconus', Molecular Vision, vol. 19, pp. 2124 - 2134

Norazman N; Wu W; Li H; Wasinger V; Zhang H; Chen V, 2013, 'Evaluation of chemical cleaning of UF membranes fouled with whey protein isolates via analysis of residual protein components on membranes surface', Separation and Purification Technology, vol. 103, pp. 241 - 250,

Yau Y; Leong RW; Zeng M; Wasinger VC, 2013, 'Proteomics and metabolomics in inflammatory bowel disease', Journal of Gastroenterology and Hepatology (Australia), vol. 28, pp. 1076 - 1086,

You J; Willcox MD; Madigan MC; Wasinger V; Schiller B; Walsh BJ; Graham PH; Kearsley JH; Li Y, 2013, 'Tear Fluid Protein Biomarkers', Advances in Clinical Chemistry, vol. 62, pp. 151 - 196,

Wang M; Han B; Wasinger V, 2013, 'Advances in quantitative mass spectrometry.', Int J Proteomics, vol. 2013, pp. 621029,

Wasinger VC; Zeng M; Yau Y, 2013, 'Current status and advances in quantitative proteomic mass spectrometry.', Int J Proteomics, vol. 2013, pp. 180605,

Yau Y; Leong RW; Wasinger VC, 2012, 'Enrichment of epithelial intermediate filament proteins in Crohn's disease sera associated with disease behaviour phenotype and disease activity', JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, vol. 27, pp. 28 - 29,

Ly L; Wasinger VC, 2011, 'Protein and peptide fractionation, enrichment and depletion: tools for the complex proteome', Proteomics, vol. 11, pp. 513 - 534,

Ly L; Wasinger VC, 2010, 'Mass and charge selective protein fractionation for the differential analysis of T-cell and CD34+ stem cell proteins from cord blood', Journal of Proteomics, vol. 73, pp. 571 - 578,

Zhao Z; Liu J; Wasinger VC; Malouf T; Nguyen-Khuong T; Walsh B; Willcox MD, 2010, 'Tear lipocalin is the predominant phosphoprotein in human tear fluid', Experimental Eye Research, vol. 90, pp. 344 - 349,

Ly L; Wasinger VC, 2008, 'Peptide enrichment and protein fractionation using selective electrophoresis', Proteomics, vol. 8, pp. 4197 - 4208,

Wasinger VC; Ly L; Fitzgerald A; Walsh B, 2008, 'Prefractionation, Enrichment, Desalting and Depleting of Low Volume and Low Abundance Proteins and Peptides Using the MF10', Methods in Molecular Biology, Two Dimensional Electrophoresis Protocols, vol. 424, pp. 257 - 275

Vitali B; Turroni S; Dal Piaz F; Candela M; Wasinger VC; Brigidi P, 2007, 'Genetic and proteomic characterization of rifaximin resistance in Bifidobacterium infantis BI07', Research in Microbiology, vol. 158, pp. 355 - 362,

McCann L; Haywood M; Ren B; Simpson AM; Guilhaus M; Wasinger VC; Raftery MJ; Davey R, 2007, 'Identification of Vascular Surface Proteins by in Vivo Biotinylation: A Method Sufficiently Sensitive To Detect Changes in Rat Liver 2 Weeks After Partial Hepatectomy', Journal of Proteome Research, vol. 6, pp. 3108 - 3113,

Wasinger V, 2006, 'Holistic biology of microorganisms: Genomics, transcriptomics, and proteomics', Methods of Biochemical Analysis, vol. 49, pp. 3 - 14

Ping P; Vondriska T; Creighton C; Gandhi T; Yang Z; Menon R; Kwon M; Cho S; Drwal G; Kellmann M; Peri S; Suresh S; Gronborg M; Molina H; Chaerkady R; Rekha B; Shet A; Gerszten R; Wu H; Raftery MJ; Wasinger VC; Schulz-Knappe P; Hanash S; Paik Y; Hancock W; States D; Omenn G; Pandey A, 2005, 'A functional annotation of subproteomes in human plasma', Proteomics, vol. 5, pp. 3506 - 3519,

Vitali B; Wasinger VC; Brigidi P; Guilhaus M, 2005, 'A proteomic view of Bifidobacterium infantis generated by multi-dimensional chromatography coupled with tandem mass spectrometry', Proteomics, vol. 5, pp. 1859 - 1867,

Larance MC; Ramm GA; Stockli J; Van Dam EM; Winata SC; Wasinger VC; Simpson F; Graham M; Junutula J; Guilhaus M; James DE, 2005, 'Characterization of the role of the Rab GTPase-activating protein AS160 in insulin-regulated GLUT4 trafficking', The Journal of Biological Chemistry, vol. 280, pp. 37803 - 37813,

Omenn G; States D; Adamski M; Blackwell T; Menon R; Hermjakob H; Apweiler R; Haab B; Simpson R; Eddes J; Kapp E; Moritz R; Chan DJ; Rai A; Admon A; Aebersold R; Eng JJ; Hancock W; Hefta S; Meyer H; Paik Y; Yoo J; Ping P; Pounds J; Adkins J; Qian X; Wang R; Wasinger VC; Wu C; Zhao X; Zeng R; Archakov A; Tsugita A; Beer I; Pandey A; Pisano M; Andrews PJ; Tammen H; Speicher D; Hanash S, 2005, 'Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database', Proteomics, vol. 5, pp. 3226 - 3245,

Larance MC; Klopcic B; Wasinger VC, 2005, 'Proteomics: An overview', Inflammatory Bowel Diseases, vol. 11, pp. 927 - 936,

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