By Professor Rowena Anne Bull

Journal articles

Eltahla AA; Leung P; Pirozyan MR; Rodrigo C; Grebely J; Applegate T; Maher L; Luciani F; Lloyd AR; Bull RA, 2017, 'Dynamic evolution of hepatitis C virus resistance-associated substitutions in the absence of antiviral treatment', Scientific Reports, 7, pp. 41719, http://dx.doi.org/10.1038/srep41719

Eltahla AA; Rodrigo C; Betz-Stablein B; Grebely J; Applegate T; Luciani F; Schinkel J; Dore GJ; Page K; Bruneau J; Morris MD; Cox AL; Kim AY; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Lloyd AR; Bull RA, 2017, 'Analysis of resistance-associated substitutions in acute hepatitis C virus infection by deep sequencing across six genotypes and three continents', Journal of Viral Hepatitis, 24, pp. 37 - 42, http://dx.doi.org/10.1111/jvh.12615

Rodrigo C; Eltahla AA; Bull RA; Luciani F; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Morris MD; Cox AL; Osburn W; Kim AY; Shoukry NH; Lauer GM; Maher L; Schinkel J; Prins M; Hellard M; Lloyd AR, 2017, 'Phylogenetic analysis of full-length, early infection, hepatitis C virus genomes among people with intravenous drug use: the InC3 Study', Journal of Viral Hepatitis, 24, pp. 43 - 52, http://dx.doi.org/10.1111/jvh.12616

Bartlett SR; Grebely J; Eltahla AA; Reeves JD; Howe AYM; Miller V; Ceccherini-Silberstein F; Bull RA; Douglas MW; Dore GJ; Harrington P; Lloyd AR; Jacka B; Matthews GV; Wang GP; Pawlotsky JM; Feld JJ; Schinkel J; Garcia F; Lennerstrand J; Applegate TL, 2017, 'Sequencing of hepatitis C virus for detection of resistance to direct-acting antiviral therapy: A systematic review', Hepatology Communications, 1, pp. 379 - 390, http://dx.doi.org/10.1002/hep4.1050

Bartlett SR; Applegate T; Jacka B; Lamoury F; Bull R; Danta M; Bradshaw D; Lloyd AR; Hellard M; Dore GJ; Matthews GV; Grebely J, 2017, 'P6 Phylogenetic clustering of recent hepatitis C virus infection between 2004 and 2015', Journal of Virus Eradication, 3, pp. 14 - 15, http://dx.doi.org/10.1016/s2055-6640(20)30747-0

Keoshkerian E; Hunter M; Cameron B; Nguyen N; Sugden P; Bull R; Zekry A; Maher L; Seddiki N; Zaunders J; Kelleher A; Lloyd AR; Dolan K; Haber P; Rawlinson W; Treloar C; Dore G; Luciani F, 2016, 'Hepatitis C-specific effector and regulatory CD4 T-cell responses are associated with the outcomes of primary infection', Journal of Viral Hepatitis, 23, pp. 985 - 993, http://dx.doi.org/10.1111/jvh.12576

Rodrigo C; Eltahla AA; Bull RA; Grebely J; Dore GJ; Applegate T; Page K; Bruneau J; Morris MD; Cox AL; Osburn W; Kim AY; Schinkel J; Shoukry NH; Lauer GM; Maher L; Hellard M; Prins M; Estes C; Razavi H; Lloyd AR; Luciani F, 2016, 'Historical Trends in the Hepatitis C Virus Epidemics in North America and Australia', Journal of Infectious Diseases, 214, pp. 1383 - 1389, http://dx.doi.org/10.1093/infdis/jiw389

Walker MR; Li H; Teutsch S; Betz-Stablein B; Luciani F; Lloyd AR; Bull RA; Dolan K; Maher L, 2016, 'Incident hepatitis c virus genotype distribution and multiple infection in australian prisons', Journal of Clinical Microbiology, 54, pp. 1855 - 1861, http://dx.doi.org/10.1128/JCM.00287-16

Eltahla AA; Rizzetto S; Pirozyan MR; Betz-Stablein BD; Venturi V; Kedzierska K; Lloyd AR; Bull RA; Luciani F; Maher L, 2016, 'Linking the T cell receptor to the single cell transcriptome in antigen-specific human T cells', Immunology and Cell Biology, 94, pp. 604 - 611, http://dx.doi.org/10.1038/icb.2016.16

Bull RA; Eltahla AA; Rodrigo C; Koekkoek SM; Walker M; Pirozyan MR; Betz-Stablein B; Toepfer A; Laird M; Oh S; Heiner C; Maher L; Schinkel J; Lloyd AR; Luciani F; Rasoli Pirozyan M, 2016, 'A method for near full-length amplification and sequencing for six hepatitis C virus genotypes', BMC Genomics, 17, pp. 247, http://dx.doi.org/10.1186/s12864-016-2575-8

Bartlett SR; Jacka B; Bull RA; Luciani F; Matthews GV; Lamoury FMJ; Hellard ME; Hajarizadeh B; Teutsch S; White B; Maher L; Dore GJ; Lloyd AR; Grebely J; Applegate TL, 2016, 'HIV infection and hepatitis C virus genotype 1a are associated with phylogenetic clustering among people with recently acquired hepatitis C virus infection', Infection Genetics and Evolution, 37, pp. 252 - 258, http://dx.doi.org/10.1016/j.meegid.2015.11.028

Narayana SK; Helbig KJ; McCartney EM; Eyre NS; Bull RA; Eltahla A; Lloyd AR; Beard MR, 2015, 'The interferon-induced transmembrane proteins, IFITM1, IFITM2, and IFITM3 inhibit hepatitis C virus entry', Journal of Biological Chemistry, 290, pp. 25946 - 25959, http://dx.doi.org/10.1074/jbc.M115.657346

Lamoury FMJ; Jacka B; Bartlett S; Bull RA; Wong A; Amin J; Schinkel J; Poon AF; Matthews GV; Grebely J; Dore GJ; Applegate TL, 2015, 'The influence of hepatitis C virus genetic region on phylogenetic clustering analysis', Plos One, 10, pp. e0131437, http://dx.doi.org/10.1371/journal.pone.0131437

Bull RA; Leung P; Gaudieri S; Deshpande P; Cameron B; Walker M; Chopra A; Lloyd AR; Luciani F, 2015, 'Transmitted/Founder Viruses Rapidly Escape from CD8 ⁺ T Cell Responses in Acute Hepatitis C Virus Infection', Journal of Virology, 89, pp. 5478 - 5490, http://dx.doi.org/10.1128/jvi.03717-14

Mina MM; Luciani F; Cameron B; Bull RA; Beard MR; Booth D; Lloyd AR, 2015, 'Resistance to hepatitis C virus: Potential genetic and immunological determinants', Lancet Infectious Diseases, 15, pp. 451 - 460, http://dx.doi.org/10.1016/S1473-3099(14)70965-X

Eltahla AA; Luciani F; White PA; Lloyd AR; Bull RA, 2015, 'Inhibitors of the hepatitis C virus polymerase; mode of action and resistance', Viruses, 7, pp. 5206 - 5224, http://dx.doi.org/10.3390/v7102868

Bretaña NA; Boelen L; Bull R; Teutsch S; White PA; Lloyd AR; Luciani F; HITS-p investigators , 2015, 'Transmission of Hepatitis C Virus among Prisoners, Australia, 2005-2012.', Emerging infectious diseases, 21, pp. 765 - 774, http://dx.doi.org/10.3201/eid2105.141832

Leung P; Bull R; Lloyd A; Luciani F, 2014, 'Erratum to “A Bioinformatics Pipeline for the Analyses of Viral Escape Dynamics and Host Immune Responses during an Infection”', BioMed Research International, 2014, pp. 1 - 2, http://dx.doi.org/10.1155/2014/680249

Töpfer A; Marschall T; Bull RA; Luciani F; Schönhuth A; Beerenwinkel N, 2014, 'Viral Quasispecies Assembly via Maximal Clique Enumeration', Plos Computational Biology, 10, http://dx.doi.org/10.1371/journal.pcbi.1003515

Leung P; Bull R; Lloyd A; Luciani F, 2014, 'A Bioinformatics Pipeline for the Analyses of Viral Escape Dynamics and Host Immune Responses during an Infection', BioMed Research International, 2014, pp. 1 - 12, http://dx.doi.org/10.1155/2014/264519

Leung P; Bull R; Lloyd A; Luciani F, 2014, 'Erratum to “A Bioinformatics Pipeline for the Analyses of Viral Escape Dynamics and Host Immune Responses during an Infection”', BioMed research international, 2014

Hartfield M; Bull R; White PA; Lloyd A; Luciani F; Alizon S, 2014, 'Evidence that hepatitis C virus genome partly controls infection outcome', Evolutionary Applications, 7, pp. 533 - 547, http://dx.doi.org/10.1111/eva.12151

Wong KKY; Rockman SP; Wong C; Bull RA; Stelzer-Braid S; Rawlinson WD, 2013, 'Comparison of influenza virus replication fidelity in vitro using selection pressure with monoclonal antibodies', Journal of Medical Virology, 85, pp. 1090 - 1094, http://dx.doi.org/10.1002/jmv.23532

Sugden PB; Pham TNQ; Ratnarajah S; Cameron B; Bull R; White PA; Michalak TI; Lloyd AR, 2013, 'Rare occurrence of occult hepatitis C virus in apparently uninfected injecting drug users: a two‐centre, masked, case–control study', Journal of Viral Hepatitis, 20, pp. 725 - 728, http://dx.doi.org/10.1111/jvh.12098

Sugden PB; Cameron B; Bull RA; White PA; Lloyd AR, 2012, 'Occult infection with hepatitis C virus: friend or foe?', , http://dx.doi.org/10.1038/icb.2012.20

Bull RA; Eden J-S; Luciani F; McElroy K; Rawlinson WD; White PA, 2012, 'Contribution of intra- and interhost dynamics to norovirus evolution', Journal of Virology, 86, pp. 3219 - 3229, http://dx.doi.org/10.1128/JVI.06712-11

Gouklani H; Bull RA; Beyer C; Coulibaly F; Gowens E; Drummer H; Netter H; White PA; Haqshenas G, 2012, 'Hepatitis C virus nonstructural protein 5B is involved in virus morphogenesis', Journal of Virology, 86, pp. 5080 - 5088, http://dx.doi.org/10.1128/JVI.07089-11

Grebely J; Pham ST; Matthews G; Petoumenos K; Bull RA; Yeung B; Rawlinson WD; Kaldor JM; Lloyd AR; Hellard M; Dore GJ; White PA; Bull ; Dolan K, 2012, 'Hepatitis C virus reinfection and superinfection among treated and untreated participants with recent infection', Hepatology, 55, pp. 1058 - 1069, http://dx.doi.org/10.1002/hep.24754

Luciani F; Bull RA; Lloyd AR; Bull , 2012, 'Next generation deep sequencing and vaccine design: Today and tomorrow', Trends in Biotechnology, 30, pp. 443 - 452, http://dx.doi.org/10.1016/j.tibtech.2012.05.005

Wong KKY; Bull RA; Stelzer-Braid S; Fennell M; Rawlinson W, 2011, 'Effect of reassortment on the nucleotide and amino acid changes of human A/H3N2 RNP subunits during 1998-2009.', Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 51, pp. 270 - 275

Bull RA; Hyde J; MacKenzie J; Hansman G; Oka T; Takeda N; White PA, 2011, 'Comparison of the replication properties of murine and human calicivirus RNA-dependent RNA polymerases', Virus Genes, 42, pp. 16 - 27, http://dx.doi.org/10.1007/s11262-010-0535-y

Wong K; Bull RA; Stelzer-Braid S; Fennell M; Rawlinson WD, 2011, 'Effect of reassortment on the nucleotide and amino acid changes of human A/H3N2 RNP subunits during 1998-2009', Journal of Clinical Virology, 51, pp. 266 - 271, http://dx.doi.org/10.1016/j.jcv.2011.05.013

Bull RA; White PA, 2011, 'Mechanisms of GII.4 norovirus evolution', Trends in Microbiology, 19, pp. 233 - 240, http://dx.doi.org/10.1016/j.tim.2011.01.002

Bull RA; Luciani F; McElroy K; Gaudieri S; Pham ST; Chopra A; Cameron B; Maher L; Dore GJ; White PA; Lloyd AR, 2011, 'Sequential Bottlenecks Drive Viral Evolution in Early Acute Hepatitis C Virus Infection', PLoS Pathog, 7, pp. e1002243, http://dx.doi.org/10.1371/journal.ppat.1002243

Bull RA; Eden J-S; Rawlinson WD; White PA, 2010, 'Correction: Rapid Evolution of Pandemic Noroviruses of the GII.4 Lineage', PLOS Pathogens, 6, pp. 10.1371/annotation/19042899-9f1b-4ccc-b13e-2a8faf19421b, http://dx.doi.org/10.1371/annotation/19042899-9f1b-4ccc-b13e-2a8faf19421b

Byun R; Sheppeard V; Bull R, 2010, 'Bug breakfast in the Bulletin: Gastroenteritis outbreaks in institutions.', New South Wales Public Health Bulletin, 21, pp. 267 - 268, http://dx.doi.org/10.1071/nb09038

Pham STP; Bull RA; Bennett JM; Rawlinson WD; Lloyd AR; Dore GJD; White PA; Bull , 2010, 'Frequent multiple hepatitis C virus infections among injection drug users in a prison setting', Hepatology, 52, pp. 1564 - 1572, http://dx.doi.org/10.1002/hep.23885

Eden J-S; Bull RA; Tu ET; McIver CJ; Michael JL; John AM; David WS; Jennie M; Rawlinson WD; White PA, 2010, 'Norovirus GII.4 variant 2006b caused epidemics of acute gastroenteritis in Australia during 2007 and 2008', Journal of Clinical Virology, 49, pp. 265 - 271, http://dx.doi.org/10.1016/j.jcv.2010.09.001

Bull RA; Eden J-S; Rawlinson WD; White PA, 2010, 'Rapid Evolution of Pandemic Noroviruses of the GII.4 lineage', PLoS Pathogens, 6, pp. e1000831 - e1000831, http://dx.doi.org/10.1371/journal.ppat.1000831

Tu ET-V; Bull RA; Greening GE; Hewitt J; Lyon MJ; Marshall JA; McIver CJ; Rawlinson WD; White PA, 2008, 'Epidemics of gastroenteritis during 2006 were associated with the spread of norovirus GII.4 variants 2006a and 2006b.', Clin Infect Dis, 46, pp. 413 - 420, http://dx.doi.org/10.1086/525259

Tu ET-V; Bull RA; Kim M-J; McIver CJ; Heron L; Rawlinson WD; White PA, 2008, 'Norovirus excretion in an aged-care setting.', J Clin Microbiol, 46, pp. 2119 - 2121, http://dx.doi.org/10.1128/JCM.02198-07

Tu ETV; Nguyen T; Lee P; Bull RA; Musto J; Hansman G; White PA; Rawlinson WD; McIver CJ, 2007, 'Norovirus GII.4 strains and outbreaks, Australia.', Emerg Infect Dis, 13, pp. 1128 - 1130, http://dx.doi.org/10.3201/eid1307.060999

Bull RA; Tanaka M; White PA, 2007, 'Norovirus recombination', Journal of General Virology, 88, pp. 3347 - 3359

Bull RA; Tu ETV; McIver CJ; Rawlinson WD; White PA, 2006, 'Emergence of a new norovirus genotype II.4 variant associated with global outbreaks of gastroenteritis.', J Clin Microbiol, 44, pp. 327 - 333, http://dx.doi.org/10.1128/JCM.44.2.327-333.2006

Bull RA; Hansman GS; Clancy LE; Tanaka MM; Rawlinson WD; White PA, 2005, 'Norovirus recombination in ORF1/ORF2 overlap', Emerging Infectious Diseases, 11, pp. 1079 - 1085, http://dx.doi.org/10.3201/eid1107.041273

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