Researcher

Keywords

Fields of Research (FoR)

Immunology, Cellular immunology, Infectious diseases

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Biography

I am a cellular immunologist specialised in vaccine development at the School of Biomedical Sciences, UNSW, and the UNSW RNA Institute. I completed my undergraduate studies at the University of Oviedo, Spain, and obtained my PhD at the University of Bonn, Germany. Following an extended post-doctoral stint at the Doherty Institute in Melbourne, I relocated to UNSW in 2023 to establish my own laboratory. My research studies fundamental T cell...view more

I am a cellular immunologist specialised in vaccine development at the School of Biomedical Sciences, UNSW, and the UNSW RNA Institute. I completed my undergraduate studies at the University of Oviedo, Spain, and obtained my PhD at the University of Bonn, Germany. Following an extended post-doctoral stint at the Doherty Institute in Melbourne, I relocated to UNSW in 2023 to establish my own laboratory. My research studies fundamental T cell biology and T cell immunity to infectious diseases, applying this knowledge to develop experimental T cell-based vaccines in preclinical models of infection and translating these findings into human vaccines.

 

Throughout my scientific career, I have made different contributions to the research fields of T cell biology, malaria immunology and vaccine development:

 

CD8+ T cell biology and tissue-resident T cell memory: My work on CD8+ T cell memory in tissues demonstrated that a subpopulation of CD8+ T cells in the mouse liver are true resident memory cells, described the transcriptional and surface marker profile of these cells and performed their functional characterisation. This research defined liver TRM cells as a unique subpopulation of memory cells with marked peculiarities, such as their exposure to the blood. This was followed by the identification of the Plasmodium berghei ribosomal protein RPL6 as a highly protective antigen for TRM-based immunity against malaria (and also the cognate antigen of PbT-I cells). RPL6 was only the second Plasmodium-derived protective CD8 T cell epitope ever identified in the C57BL/6 background, enabled direct studies of endogenous liver TRM cells specific for Plasmodium, and was essential for subsequent development of TRM-based vaccines against malaria. My research also explored the requirements for the establishment and maintenance of CD8+ T cell resident memory in the liver, and also the capacity of various adjuvants to induce liver TRM cell formation and malaria protection

Development of TRM cell-based malaria vaccines: These advances in understanding TRM biology enabled the generation of the first TRM-based subunit experimental vaccine against malaria, termed "Prime and Trap". This vaccine provided unprecedented protection (for a subunit vaccine) against Plasmodium liver infection in mice, proving that TRM immunity could be efficiently harnessed for exceptional malaria protection, and delineated the requirements to induce this type of immunity. Subsequent work developed a more simple, second generation glycolipid vaccine and a third generation, mRNA-based vaccine against malaria, both based on similar principles as Prime and Trap.

 

Development of key scientific resources for the research of malaria immunology: The study of malaria immunology offers unique insights into fundamental mechanisms regulating T cell biology, such as T cell activation, expansion and persistence, T cell exhaustion and tissue immunity. A major challenge in this field has been the lack of adequate tools for accurately tracking T cell responses in mice. I contributed to the development of the first Plasmodium-specific, MHC I-restricted and MHC II-restricted T cell receptor transgenic mouse lines (termed PbT-I and PbT-II respectively), which have enabled important contributions to basic immunology and malaria immunity. More recently, a cross-disciplinary approach involving mass spectrometry analyses identified the cognate Plasmodium antigens recognised by PbT-I and PbT-II cells, further enhancing the usefulness of these immunological tools.

 

CD4+ T cell biology: Using PbT-II cells, my work revealed the importance of type I dendritic cells in priming CD4+ T cell responses against malaria and promoting specific, polarised CD4+ T cell subsets. This work also demonstrated the importance of CD4+ T cells in licensing dendritic cells to generate CD8+ T cell responses, even in the presence of systemic inflammation (i.e. blood stage malaria). These findings have important implications for understanding of CD8+ T cell immunity and, potentially, for future immunisation strategies targeting antigen presenting cells.

 

Development of a COVID vaccine: I have had the opportunity to collaborate in the development of a new COVID vaccine by the Torresi lab, Doherty Institute, assessing its capacity to generate CD4 and CD8 T cell responses.

 


My Grants

NHMRC Project grant, GP1139486, 2018-21, $1,196,853. Role: CIA.

ARC Discovery Grant, DP220103545, 2022-2025, $770,000. Role: CIB.

CASS Science & Medicine grant, 2020, $58,000. Role: sole CI.

School of Biomedical Sciences EMCRA Collaborative Award, University of Melbourne, 2022, $20,000. Role: co-CI.

Research Grant Support Scheme, University of Melbourne, 2023, $37,474. Role: sole CI.


My Qualifications

2008 - PhD, Immunology, University of Bonn, Germany.

2003 - BSc, Biochemistry, University of Oviedo, Spain.

2001 - BSc, Biology, University of Oviedo, Spain.


My Research Supervision


Supervision keywords


Areas of supervision

My lab studies the fundamental mechanisms responsible for the generation and maintenance of T cell memory. A particular focus of my research is the study of tissue resident memory T cells (TRM cells), which have been recently identified, and have been found to provide outstanding protection against infectious diseases. Harnessing TRM-based immunity promises to bring about a new generation of vaccines of unprecedented efficacy, and a particularly suitable platform to achieve this, due to its versatility, is RNA technology. My lab seeks to develop novel RNA vaccines that realise the protective potential of T cells against infection.

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Location

Wallace Wurth Building, Level 2, Room 231

Publications

by Dr Daniel Fernandez Ruiz