By Associate Professor Andrew Collins

Journal articles

Collins AM; Ikutani M; Puiu D; Buck G; Nadkarni A; Gaeta BA, 2004, 'Partitioning of rearranged Ig genes by mutation analysis demonstrates D-D fusion and V gene replacement in the expressed human repertoire', Journal of Immunology, 172, pp. 340 - 348

Collins AM; Sewell WA; Edwards MR, 2003, 'Immunoglobulin gene rearrangement, repertoire diversity, and the allergic response', Pharmacology and Therapeutics, 100, pp. 157 - 170

Edwards MR; Brouwer W; Choi CH; Ruhno J; Ward RL; Collins AM, 2002, 'Analysis of IgE antibodies from a patient with atopic dermatitis: Biased V gene usage and evidence for polyreactive IgE heavy chain complementary-determining region 3', Journal of Immunology, 168, pp. 6305 - 6313

Qi JC; Stevens RL; Wadley RB; Collins AM; Cooley MA; Naif H; Nasr N; Cunningham AL; Katsoulotos GP; Wanigasek Y; Roufogalis B; Krilis S, 2002, 'IL-16 Regulation of Human Mast Cells/Basophils and Their Susceptibility to HIV-1', Journal of Immunology, 168, pp. 4127 - 4134

Mitchell AJ; Moss ND; Collins AM, 2002, 'The Biological Activity of Serum IgE Changes over the course of a primary response', Scandinavian Journal of Immunology, 55, pp. 33 - 43

Li Y; Li L; Wadley RB; Reddel SW; Qi JC; Archis CA; Collins AM; Clarke E; Cooley MA; Kouts S; Naif H; Alali M; Cunningham AL; Wong GW; Stevens RL; Krilis S, 2001, 'Mast cell/basophils in the peripheral blood of allergic individuals who are HIV-1 susceptible due to their surface expression of CD4 and the chemokine receptors CCR3, CCR5 and CXCR4', Blood, pp. 3484 - 3490

Chan A; Cooley MA; Collins AM, 2001, 'Mast cells in the liver are phenotypically heterogeneous and exhibit features of immaturity', Immunology and Cell Biology, pp. 35 - 40

Edwards MR; Collins AM; Ward RL, 2001, 'The application of phage display in allergy research:characterization of IgE, identification of allergens and development of novel therapeutics', Current Pharmaceutical Biotechnology, 2, pp. 225 - 240

Mitchell AJ; Edwards MR; Collins AM, 2001, 'Valency or Wahlency: Is the ipitope diversity of the B-cell response regulated or chemically determined?', Immunology and Cell Biology, pp. 507 - 511

Li Y; Li L; Wadley R; Reddel S; Qi J; Archis C; Collins A; Clark E; Cooley M; Kouts S; Hassan N; Mohammed A; Cunningham A; Wong G; Stevens R; Krilis S, 2000, 'Identification of a novel population of mast cells/basophils in human periphal blood of allergic patients which is HIV-1 susceptible due to its surface expression of CD4, CCR5, and CXCR4', JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, 105, pp. S86 - S87, http://dx.doi.org/10.1016/S0091-6749(00)90690-0

Islam AF; Moss ND; Dai Y; Smith MS; Collins AM; Jackson GD, 2000, 'Lipopolysaccharide-induced biliary factors enhance invasion of salmonella enteritidis in a rat model', Infection and Immunity, pp. 1 - 5

Collins AM; Leach ST; Payne JM; Mitchell AJ; Dai Y; Jackson GD, 1999, 'A role for the hepatobiliary system in IgE-mediated intestinal inflammation in the rat', Clinical and Experimental Allergy, pp. 262 - 270

Feng CG; Collins AM, 1999, 'Pasteurisation and homogenisation of milk enhances the immunogenicity of milk plasma proteins in a rat model', Food and Agricultural Immunology, 11, pp. 251 - 258

Philips JR; Brouwer W; Edwards MR; Mahler SM; Ruhno J; Collins AM, 1999, 'The effectiveness of different rat IgG subclasses as IgE-blocking antibodies in the rat basophil leukaemia cell model.', Immunology and Cell Biology, pp. 121 - 126

Phillips JR; Brouwer W; Edwards MR; Mahler SM; Ruhno J; Collins AM, 1999, 'The effectiveness of different rat IgG subclasses as IgE-blocking antibodies in the Rat Basophil Leukemia cell model.', Immunology and Cell Biology, pp. 121 - 126

Collins AM; Basil M; Nguyen KL; Thelian D, 1996, 'Rat basophil leukaemia (RBL) cells sensitized with low affinity IgE respond to high valency antigen', Clinical and Experimental Allergy, pp. 964 - 970

Collins AM; Thelian D; Basil M, 1995, 'Antigen valency as a determinant of the responsiveness of IgE-sensitised rat basophil leukemia cells', International Archives of Allergy and Immunology, 107, pp. 547 - 556

KOH DH; COLLINS AM, 1993, 'LOW-LEVEL EXPRESSION OF THE T15 IDIOTYPE IN RATS', JOURNAL OF LEUKOCYTE BIOLOGY, pp. 94 - 94, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:A1993ME18500362&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

KOH DH; COLLINS AM, 1993, 'SUPPRESSION OF THE ANTI-PC RESPONSE OF RATS AFTER IMMUNIZATION WITH ANTI-T15 ANTIBODIES', JOURNAL OF LEUKOCYTE BIOLOGY, pp. 94 - 94, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:A1993ME18500361&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

MITCHELL A; COLLINS A; DAI Y; JACKSON GDF, 1993, 'TUMOR-NECROSIS-FACTOR-ALPHA IN THE MILK OF LPS-STIMULATED RATS', JOURNAL OF LEUKOCYTE BIOLOGY, pp. 112 - 112, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:A1993ME18500470&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

COLLINS A, 1992, 'EAT YOUR GREENS', NEW SCIENTIST, 133, pp. 56 - 56, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:A1992GZ50900044&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

King H; Rao DC; Bhatia K; Koki G; Collins A; Zimmet P, 1989, 'Family resemblance for glucose tolerance in a melanesian population, the tolai', Human Heredity, 39, pp. 212 - 217, http://dx.doi.org/10.1159/000153862

King H; Finch C; Collins A; Koki G; King LF; Heywood P; Zimmet P, 1989, 'Glucose tolerance in Papua New Guinea: Ethnic differences, association with environmental and behavioural factors and the possible emergence of glucose intolerance in a highland community', Medical Journal of Australia, 151, pp. 204 - 210, http://dx.doi.org/10.5694/j.1326-5377.1989.tb115991.x

King H; Collins A; King LF; Heywood P; Alpers M; Coventry J; Zimmet P, 1985, 'Blood pressure in Papua New Guinea: A survey of two highland villages in the Asaro Valley', Journal of Epidemiology and Community Health, 39, pp. 215 - 219, http://dx.doi.org/10.1136/jech.39.3.215

King H; Heywood P; Zimmet P; Alpers M; Collins V; Collins A; King LF; Raper LR, 1984, 'Glucose tolerance in a highland population in Papua New Guinea', Diabetes Research, 1, pp. 45 - 51

Conference Papers

Chen Z; Collins AM; Wang Y; Gaeta BA, 2010, 'Clustering-based identification of clonally related immunoglobulin gene sequence sets', in Immunome Research, Tokyo, Japan, pp. S4, presented at Ninth International Conference on Bioinformatics (InCoB2010), Tokyo, Japan, 26 September 2010 - 28 September 2010, http://dx.doi.org/10.1186/1745-7580-6-S1-S4

Collins AM, 2009, 'Distinctive features of IgE sequences in Papua New Guinea villagers compared with allergic and non-allergic Australians', in Journal of Allergy and Clinical Immunology, Mosby, St Louis, MO, USA, pp. LB16 - LB16, presented at 2009 AAAAI Annual Meeting, Washington, DC, 13 March 2009 - 17 March 2009

Collins AM, 2009, 'Distinctive features of IgE sequences in Papua New Guinea villagers compared with allergic and non-allergic Australians', in JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY, MOSBY-ELSEVIER, DC, Washington, pp. 727 - 727, presented at 65th Annual Meeting of the American-Academy-of-Allergy-Asthma-and-Immunology, DC, Washington, 13 March 2009 - 17 March 2009, http://dx.doi.org/10.1016/j.jaci.2009.01.020

Collins A; Ikutani M; Nadkarni A; Gaeta B; Sewell W, 2003, 'Analysis of the distribution of point mutations can be used to evaluate D segment alignments of rearranged immunoglobulin heavy chain genes', in FASEB JOURNAL, FEDERATION AMER SOC EXP BIOL, COLORADO, DENVER, pp. C193 - C193, presented at 90th Annual Meeting of the American-Association-for-Immunologists, COLORADO, DENVER, 06 May 2003 - 10 May 2003, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000182367000893&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Collins A; Choi C; Ruhno J; Sewell W, 2003, 'Polyreactive cyclic peptides share binding profiles with serum IgE antibodies of allergic patients', in FASEB JOURNAL, FEDERATION AMER SOC EXP BIOL, COLORADO, DENVER, pp. C253 - C253, presented at 90th Annual Meeting of the American-Association-for-Immunologists, COLORADO, DENVER, 06 May 2003 - 10 May 2003, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000182367001178&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Collins AM; Leach ST; Payne JM; Judd RM; Dai Y; Jackson GD, 1997, 'Hepatic mast cells and hypersensitivity reactions in the intestine', in Husband AJ; Beagley K; Clancy R; Collins A (eds.), 9th International Congress of Mucosal Immunology, Sydney, pp. 39 - 48, presented at 9th International Congress of Mucosal Immunology, Sydney

Conference Proceedings (Editor of)

Husband A; Beagley K; Clancy R; Collins AM; Cripps AW; Emery DL, (eds.), 1997, '9th International Congress of Mucosal Immunology', Sydney, presented at 9th International Congress of Mucosal Immunology, Sydney

Husband A; Beagley K; Clancy R; Collins AM; Cripps AW; Emery DL, (eds.), 1997, '9th International Congress of Mucosal Immunology', Sydney, presented at 9th International Congress of Mucosal Immunology, Sydney

Conference Presentations

Hunt JE; Jackson N; Wang HW; Geczy C; Collins A; Hettiaratchi A; McNeil P, 2001, 'Murine bone-marrow derived mast cells migrate in response to IL-15', https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000167438102030&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Chen J; Hunt JE; Morgner A; McNeil HP; Tedla N; Hampart-zoumian T; Wang HW; O'Rourke J; Collins A; Friend D; Austen KF; Lee A, 1999, 'Induction of IL-15 and a novel mast cell phenotype in mice infected with Helicobacter felis', https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000082469400197&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Hunt J; Chen J; McNeil HP; Telda N; Hampartzoumiam T; Wang HW; O'Rourke JL; Morgner A; Collins A; Friend D; Austen KF; Lee A, 1999, 'Induction of IL-15 and a novel mast cell phenotype in a mouse model of helicobacter infection.', https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000079778400839&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Hunt JE; Chen J; McNeil HP; Tedla N; Hampartzoumian T; Wang HW; O'Rourke J; Collins A; Friend D; Austen KF; Lee A, 1999, 'Induction of IL-15 and a novel mouse mast cell phenotype in mice infected with Helicobacter felis.', https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000082033301679&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Preprints

Collins AM; Ohlin M; Corcoran M; Heather JM; Ralph D; Law M; Martínez-Barnetche J; Ye J; Richardson E; Gibson WS; Rodriguez OL; Peres A; Yaari G; Watson CT; Lees WD, 2023, AIRR-C Human IG Reference Sets: curated sets of immunoglobulin heavy and light chain germline genes, http://dx.doi.org/10.1101/2023.09.01.555348

Peres A; Lees WD; Rodriguez OL; Lee NY; Polak P; Hope R; Kedmi M; Collins AM; Ohlin M; Kleinstein SH; Watson CT; Yaari G, 2022, IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing data, http://dx.doi.org/10.1101/2022.12.26.521922

Kos JT; Safonova Y; Shields KM; Silver CA; Lees WD; Collins AM; Watson CT, 2022, Characterization of Extensive Diversity In Immunoglobulin Light Chain Variable Germline Genes Across Biomedically Important Mouse Strains, http://dx.doi.org/10.1101/2022.05.01.489089

Jackson KJL; Kos JT; Lees W; Gibson WS; Smith ML; Peres A; Yaari G; Corcoran M; Busse CE; Ohlin M; Watson CT; Collins AM, 2022, A BALB/c IGHV Reference Set, defined by haplotype analysis of long-read VDJ-C sequences from F1 (BALB/c / C57BL/6) mice, http://dx.doi.org/10.1101/2022.02.28.482396

Omer A; Peres A; Rodriguez OL; Watson CT; Lees W; Polak P; Collins AM; Yaari G, 2021, T Cell Receptor Beta Germline Variability is Revealed by Inference From Repertoire Data, http://dx.doi.org/10.1101/2021.05.17.444409

Watson C; Kos J; Gibson W; Newman L; Deikus G; Busse C; Smith ML; Jackson KJL; Collins A, 2019, A comparison of immunoglobulin IGHV, IGHD and IGHJ genes in wild-derived and classical inbred mouse strains, http://dx.doi.org/10.1101/631754

Gidoni M; Snir O; Peres A; Polak P; Lindeman I; Mikocziova I; Sarna VK; Lundin KEA; Clouser C; Vigneault F; Collins AM; Sollid LM; Yaari G, 2018, Mosaic deletion patterns of the human antibody heavy chain gene locus as revealed by Bayesian haplotyping, http://dx.doi.org/10.1101/314476

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