By Associate Professor Mark Raftery

Journal articles

Caplan GA; Poljak A; Hill MA; Hall R; MacLullich A; Raftery M; Tai J; Yan S, 2014, 'Quantitative Proteomics of Delirium Cerebrospinal Fluid', Translational Psychiatry, 4, pp. e477 - e477, http://dx.doi.org/10.1038/tp.2014.114

Richards SL; Cawley AT; Raftery MJ, 2013, 'Detection and quantification of dermorphin and selected analogs in equine urine', Bioanalysis, 5, pp. 2995 - 3007, http://dx.doi.org/10.4155/bio.13.281

Lee THY; Mitchell A; Lau SL; An H; Rajeaskariah P; Wasinger V; Raftery M; Bryant K; Tedla N, 2013, 'Glycosylation in a mammalian expression system is critical for the production of functionally active leukocyte immunoglobulin-like receptor A3 protein', Journal of Biological Chemistry, 288, pp. 32873 - 32885, http://dx.doi.org/10.1074/jbc.M113.478578

Lee BY; Hochgraefe F; Lin H-M; Castillo L; Wu J; Raftery M; Shreeve SM; Horvath L; Daly R, 2013, 'Focal adhesion kinase: a mediator of docetaxel-resistance in castrate resistant prostate cancer', BJU INTERNATIONAL, 112, pp. 38 - 39, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000321969100100&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Li A; Estigoy C; Raftery M; Cameron D; Odeberg J; Pontén F; Lal S; dos Remedios CG, 2013, 'Heart research advances using database search engines, human protein atlas and the sydney heart bank', Heart Lung and Circulation, 22, pp. 819 - 826, http://dx.doi.org/10.1016/j.hlc.2013.06.006

Lee BY; Hochgräfe F; Lin HM; Castillo L; Wu J; Raftery MJ; Martin Shreeve S; Horvath LG; Daly RJ, 2013, 'Phosphoproteomic profiling identifies focal adhesion kinase as a mediator of docetaxel resistance in castrate-resistant prostate cancer', Molecular Cancer Therapeutics, 13, pp. 190 - 201, http://dx.doi.org/10.1158/1535-7163.MCT-13-0225-T

Hooi MSY; Raftery MJ; Truscott RJW, 2013, 'Accelerated aging of Asp 58 in áA crystallin and human cataract formation', Experimental Eye Research, 106, pp. 34 - 39, http://dx.doi.org/10.1016/j.exer.2012.10.013

Hooi MSY; Raftery MJ; Truscott RJW, 2013, 'Age-dependent racemization of serine residues in a human chaperone protein', Protein Science, 22, pp. 93 - 100, http://dx.doi.org/10.1002/pro.2191

Raftery MJ; Yan WX; Goyette JD; Thomas PS; Geczy C; Gomes L, 2013, 'S100A8 and S100A9-oxidant scavengers in inflammation', Free Radical Biology and Medicine, 58, pp. 170 - 186, http://dx.doi.org/10.1016/j.freeradbiomed.2012.12.012

Sirianni A; Kaakoush NO; Raftery MJ; Mitchell HM, 2013, 'The pathogenic potential of Helicobacter pullorum: Possible role for the Type VI secretion system', Helicobacter, 18, pp. 102 - 111, http://dx.doi.org/10.1111/hel.12009

Hooi MYS; Raftery MJ; Truscott RJW, 2012, 'Racemization of two proteins over our lifespan: Deamidation of asparagine 76 in γS crystallin is greater in cataract than in normal lenses across the age range', Investigative Ophthalmology and Visual Science, 53, pp. 3554 - 3561, http://dx.doi.org/10.1167/iovs.11-9085

Lee BY; Hochgrafe F; Raftery M; Horvath LG; Daly RJ, 2012, 'Abstract A33: Characterization of signaling pathways associated with docetaxel resistance in prostate cancer', Cancer Research, 72, pp. A33 - A33, http://dx.doi.org/10.1158/1538-7445.prca2012-a33

Burgos-Portugal JA; Kaakoush NO; Raftery MJ; Mitchell HM, 2012, 'Pathogenic potential of Campylobacter ureolyticus', Infection and Immunity, 80, pp. 883 - 890, http://dx.doi.org/10.1128/IAI.06031-11

Hooi MSY; Raftery MJ; Truscott RJW, 2012, 'Age-dependent deamidation of glutamine residues in human ãS crystallin: deamidation and unstructured regions', Protein Science, 21, pp. 1074 - 1079, http://dx.doi.org/10.1002/pro.2095

Okoli AS; Raftery MJ; Mendz GL, 2012, 'Comparison of Helicobacter bilis-Associated Protein Expression in Huh7 Cells Harbouring HCV Replicon and in Replicon-Cured Cells', Journal of Hepatology, 2012, http://dx.doi.org/10.1155/2012/501671

Hart-Smith GO; Raftery MJ, 2012, 'Detection and characterization of low abundance glycopeptides via higher-energy C-trap dissociation and orbitrap mass analysis', Journal of the American Society for Mass Spectrometry, 23, pp. 124 - 140

Okoli AS; Raftery MJ; Mendz GL, 2012, 'Effects of human and porcine bile on the proteome of Helicobacter hepaticus', Proteome Science, 10, pp. Article number 27, http://dx.doi.org/10.1186/1477-5956-10-27

Burgos-Portugal J; Kaakoush NO; Raftery MJ; Mitchell HM, 2012, 'Pathogenic potential of Campylobacter ureolyticus', Infection and Immunity, 80, pp. 883 - 890, http://dx.doi.org/10.1128/?IAI.06031-11

Omali NB; Zhao Z; Zhong L; Raftery MJ; Zhu H; Ozkan J; Willcox MDP, 2012, 'Quantification of protein deposits on silicone hydrogel materials using stable-isotopic labeling and multiple reaction monitoring', Biofouling, 28, pp. 697 - 709, http://dx.doi.org/10.1080/08927014.2012.702763

Daly RJ; Hochgraefe F; Croucher DR; Zhang L; Rickwood D; Browne BC; Tactacan C; Raftery M, 2011, 'A novel tyrosine kinase signaling pathway in human basal breast cancer', CANCER RESEARCH, 71, http://dx.doi.org/10.1158/1538-7445.AM2011-3131

Lauro FM; Demaere MZ; Yau S; Brown MV; Wilkins D; Ng SC; Raftery MJ; Gibson JA; Andrews-Pfannkoch C; Lewis M; Hoffman JM; Thomas T; Cavicchioli R, 2011, 'An integrative study of a meromictic lake ecosystem in Antarctica', ISME Journal, 5, pp. 879 - 895

Cheng Z; Chan AK ; Lewis CR; Thomas PS ; Raftery MJ , 2011, 'Comparative Proteomics Analysis of Exhaled Breath Condensate in Lung Cancer Patients', Journal of Cancer Therapy, 02, pp. 1 - 8, http://dx.doi.org/10.4236/jct.2011.21001

Kovach Z; Kaakoush NO; Lamb S; Zhang L; Raftery MJ; Mitchell HM; Lamb S, 2011, 'Immunoreactive proteins of Campylobacter concisus, an emergent intestinal pathogen.', FEMS Immunology and Medical Microbiology, 63, pp. 387 - 396, http://dx.doi.org/10.1111/j.1574-695X.2011.00864.x

Lim S; Raftery MJ; Geczy C, 2011, 'OXIDATIVE MODIFICATIONS OF DAMPs SUPPRESS INFLAMMATION: THE CASE FOR S100A8 AND S100A9', Antioxidants and Redox Signaling, 15, pp. 2235 - 2248, http://dx.doi.org/10.1089/ars.2010.3641

Coumans J; Harvey JE; Backhouse D; Poljak A; Raftery MJ; Nehl D; Katz M; Pereg L, 2011, 'Proteomic assessment of host-associated microevolution in the fungus Thielaviopsis basicola', Environmental Microbiology, 13, pp. 576 - 588, http://dx.doi.org/10.1111/j.1462-2920.2010.02358.x

Lee MH; Lalwani P; Raftery MJ; Matthaei M; Lutteke N; Kirsanovas S; Binder M; Ulrich RG; Giese T; Wolff T; Kruger DH; Schonrich G, 2011, 'RNA helicase retinoic acid-inducible gene I as a sensor of Hantaan virus replication.', Journal of General Virology, 92, pp. 2191 - 2200

Deshpande NP; Kaakoush NO; Mitchell HM; Janitz K; Raftery MJ; Li SS; Wilkins MR, 2011, 'Sequencing and validation of the genome of a Campylobacter concisus reveals intra-species diversity', PLoS ONE, 6, pp. e22170, http://dx.doi.org/10.1371/journal.pone/0022170

Kaakoush NO; Deshpande NP; Wilkins MR; Tan C; Burgos-Portugal J; Raftery MJ; Day AS; Lemberg DA; Mitchell HM, 2011, 'The pathogenic potential of campylobacter concisus strains associated with chronic intestinal diseases', PLoS One, 6, pp. e29045, http://dx.doi.org/10.1371

Raddatz K; Turner N; Frangioudakis G; Liao BM; Pedersen DJ; Cantley J; Wilks D; Preston E; Hegarty BD; Leitges M; Raftery MJ; Biden TJ; Schmitz-Peiffer C, 2011, 'Time-dependent effects of Prkce deletion on glucose homeostasis and hepatic lipid metabolism on dietary lipid oversupply in mice.', Diabetologia, 54, pp. 1447 - 1456, http://dx.doi.org/10.1007/s00125-011-2073-0

Lim YA; Rhein V; Baysang G; Meier F; Poljak A; Raftery MJ; Guilhaus M; Ittner LM; Eckert A; Götz J, 2010, 'Aβ and human amylin share a common toxicity pathway via mitochondrial dysfunction', Proteomics, 10, pp. 1621 - 1633, http://dx.doi.org/10.1002/pmic.200900651

Muenchhoff J; Siddiqui KS; Poljak A; Raftery MJ; Barrow KD; Neilan BA, 2010, 'A novel prokaryotic L-arginine:glycine amidinotransferase is involved in cylindrospermopsin biosynthesis', FEBS Journal, 277, pp. 3844 - 3860

Lim Y-A; Rhein V; Baysang G; Meier F; Poljak A; Raftery MJ; Guilhaus M; Ittner LM; Eckert A; Gotz J, 2010, 'Ab and human amylin share a common toxicity pathway via mitochondrial dysfunction', Proteomics, 10, pp. 1621 - 1633

Lim Y; Rhein V; Baysang G; Meier F; Poljak A; Raftery MJ; Guilhaus M; Ittner LM; Eckert A; Götz J, 2010, 'Aβ and human amylin share a common toxicity pathway via mitochondrial dysfunction', PROTEOMICS – Clinical Applications, 4, pp. 768 - 768, http://dx.doi.org/10.1002/prca.201090048

Ting LL; Williams TJ; Cowley MJ; Lauro FM; Guilhaus M; Raftery MJ; Cavicchioli R, 2010, 'Cold adaptation in the marine bacterium, Sphingopyxis alaskensis assessed using quantitative proteomics.', Environmental Microbiology, 12, pp. 2658 - 2676

Williams TJ; Burg DW; Ertan H; Raftery MJ; Poljak A; Guilhaus M; Cavicchioli R, 2010, 'Global proteomic analysis of the insoluble, soluble, and supernatant fractions of the psychrophilic archaeon Methanococcoides burtonii. Part II: The effect of different methylated growth substrates', Journal of Proteome Research, 9, pp. 653 - 663

Coumans J; Moens PDJ; Poljak A; Al-Jaaidi S; Pereg-Gerk L; Raftery MJ, 2010, 'Plant-extract-induced changes in the proteome of the soil-borne pathogenic fungus Thielaviopsis basicola', Proteomics, 10, pp. 1573 - 1591

Okoli AS; Wilkins MR; Raftery MJ; Mendz GL, 2010, 'Response of Helicobacter hepaticus to bovine bile', Journal of Proteome Research, 9, pp. 1374 - 1384

Lim SY; Raftery MJ; Goyette JD; Geczy C, 2010, 'S-Glutathionylation Regulates Inflammatory Activities of S100A9', The Journal of Biological Chemistry, 285, pp. 14377 - 14388

Kaakoush NO; Man SM; Lamb S; Raftery MJ; Wilkins MR; Kovach Z; Mitchell HM, 2010, 'The secretome of Campylobacter concisus.', FEBS Journal, 277, pp. 1606 - 1617

Terentis AC; Freewan M; Sempertegui Plaza T; Raftery MJ; Stocker R; Thomas SR, 2010, 'The selenazal drug ebselen potently inhibits indoleamine 2,3-dioxygenase by targeting enzyme cysteine residues', Biochemistry, 49, pp. 591 - 600, http://dx.doi.org/10.1021/bi901546e

Hochgrafe F; Cubas AP; Lehrbach G; Raftery M; Guilhaus M; Daly R, 2009, 'Definition of a tyrosine phosphorylation signature characteristic of basal breast cancer cells', CANCER RESEARCH, 69, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000209701804189&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Coumans J; Poljak A; Raftery MJ; Backhouse D; Pereg-Gerk L, 2009, 'Analysis of cotton (gossypium hirsutum) root proteomes during a compatible interaction with the black root rot fungus Thielaviopsis basicola', Proteomics, 9, pp. 335 - 349

Woodward M; Croft KD; Mori T; Headlam H; Wang XS; Suarna C; Raftery MJ; MacMahon S; Stocker R, 2009, 'Association between both lipid and protein oxidation and the risk of fatal or non-fatal coronary heart disease in a human population', Clinical Science, 116, pp. 53 - 60

Tsoi BM; Beckhouse AG; Gelling CL; Raftery MJ; Chiu J; Tsoi AM; Lauterbach L; Rogers PL; Higgins VJ; Dawes IW, 2009, 'Essential role of one-carbon metabolism and Gcn4p and Bas1p transcriptional regulators during adaptation to anaerobic growth of Saccharomyces cerevisiae', The Journal of Biological Chemistry, 284, pp. 11205 - 11215

Leuko S; Raftery MJ; Burns BP; Walter MR; Neilan BA, 2009, 'Global protein-level responses of halobacterium salinarum NRC-1 to prolonged changes in external sodium chloride concentrations', Journal of Proteome Research, 8, pp. 2218 - 2225

Lu HK; Rentero C; Raftery MJ; Borges L; Bryant KJ; Tedla NT, 2009, 'Leukocyte Ig-like Receptor B4 (LILRB4) Is a Potent Inhibitor of FcgammaRI-mediated Monocyte Activation via Dephosphorylation of Multiple Kinases', The Journal of Biological Chemistry, 284, pp. 34839 - 34848

Huang K; Filarsky M; Padula M; Raftery MJ; Herbert B; Wilkins MR, 2009, 'Micropreparative fractionation of the complexome by blue native continuous elution electrophoresis', Proteomics, 9, pp. 2494 - 2502

Ting LL; Cowley MJ; Hoon S; Guilhaus M; Raftery MJ; Cavicchioli R, 2009, 'Normalization and statistical analysis of quantitative proteomics data generated by metabolic labeling', Molecular and Cellular Proteomics, 8, pp. 2227 - 2242

Lim SY; Raftery MJ; Goyette JD; Hsu KK; Geczy C, 2009, 'Oxidative modifications of S100 proteins: functional regulation by redox', Journal of Leukocyte Biology, 86, pp. 577 - 587

Matallana-Surget S; Joux F; Raftery MJ; Cavicchioli R, 2009, 'The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics', Environmental Microbiology, 11, pp. 2660 - 2675

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