Select Publications

Book Chapters

Kim KW; Eamens AL; Waterhouse PM, 2011, 'RNA Processing Activities of the Arabidopsis Argonaute Protein Family', in Grabowski P (ed.), RNA Processing, InTech Open, http://dx.doi.org/10.5772/22686

Journal articles

Foster CSP; Stelzer-Braid S; Deveson IW; Bull RA; Yeang M; Au JP; Ruiz Silva M; van Hal SJ; Rockett RJ; Sintchenko V; Kim KW; Rawlinson WD, 2022, 'Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia', Viruses, vol. 14, pp. 185 - 185, http://dx.doi.org/10.3390/v14020185

Kim KW; Wang X; Adhikari A; Yeang M; Jenkins F; Naing Z; Walker GJ; Foster CSP; Stelzer-Braid S; Deveson I; Craig ME; Tedla N; Bull RA; Martinello M; Pinto AN; Chan R; Turville S; Rawlinson WD; van Hal S, 2022, 'Persistent high-level shedding of cultivable SARS-CoV-2 Delta virus 33 days after onset of COVID-19 in a hospitalized patient with pneumonia', Journal of Medical Virology, http://dx.doi.org/10.1002/jmv.27832

Kim KW; Deveson IW; Pang CNI; Yeang M; Naing Z; Adikari T; Hammond JM; Stevanovski I; Beukers AG; Verich A; Yin S; McFarlane D; Wilkins MR; Stelzer-Braid S; Bull RA; Craig ME; van Hal SJ; Rawlinson WD, 2021, 'Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing', Scientific Reports, vol. 11, pp. 3934, http://dx.doi.org/10.1038/s41598-021-83642-x

Hope CM; Huynh D; Wong YY; Oakey H; Perkins GB; Nguyen T; Binkowski S; Bui M; Choo AYL; Gibson E; Huang D; Kim KW; Ngui K; Rawlinson WD; Sadlon T; Couper JJ; Penno MAS; Barry SC, 2021, 'Optimization of blood handling and peripheral blood mononuclear cell cryopreservation of low cell number samples', International Journal of Molecular Sciences, vol. 22, pp. 9129 - 9129, http://dx.doi.org/10.3390/ijms22179129

Faulkner CL; Luo YX; Isaacs S; Rawlinson WD; Craig ME; Kim KW, 2021, 'The virome in early life and childhood and development of islet autoimmunity and type 1 diabetes: A systematic review and meta-analysis of observational studies', Reviews in Medical Virology, vol. 31, pp. 1 - 14, http://dx.doi.org/10.1002/rmv.2209

Foster CSP; Stelzer-Braid S; Deveson I; Bull R; Yeang M; Phan-Au J; Silva MR; van Hal S; Rockett R; Sintchenko V; Kim KW; Rawlinson W, 2021, 'Assessment of inter-laboratory differences in SARS-CoV-2 consensus genome assemblies between public health laboratories in Australia', , http://dx.doi.org/10.1101/2021.08.19.21262296

Isaacs SR; Foskett DB; Maxwell AJ; Ward EJ; Faulkner CL; Luo JYX; Rawlinson WD; Craig ME; Kim KW, 2021, 'Viruses and type 1 diabetes: From enteroviruses to the virome', Microorganisms, vol. 9, pp. 1519 - 1519, http://dx.doi.org/10.3390/microorganisms9071519

Isaacs S; Foskett D; Maxwell A; Ward E; Faulkner C; Luo J; Rawlinson W; Craig M; Kim KW, 2021, 'Viruses and Type 1 Diabetes: From Enteroviruses to the Virome', , http://dx.doi.org/10.20944/preprints202106.0574.v1

Bull RA; Adikari TN; Ferguson JM; Hammond JM; Stevanovski I; Beukers AG; Naing Z; Yeang M; Verich A; Gamaarachchi H; Kim KW; Luciani F; Stelzer-Braid S; Eden JS; Rawlinson WD; van Hal SJ; Deveson IW, 2020, 'Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis', Nature Communications, vol. 11, pp. 6272, http://dx.doi.org/10.1038/s41467-020-20075-6

Kim KW; Allen DW; Briese T; Couper JJ; Barry SC; Colman PG; Cotterill AM; Davis EA; Giles LC; Harrison LC; Harris M; Haynes A; Horton JL; Isaacs SR; Jain K; Lipkin WI; McGorm K; Morahan G; Morbey C; Pang ICN; Papenfuss AT; Penno MAS; Sinnott RO; Soldatos G; Thomson RL; Vuillermin P; Wentworth JM; Wilkins MR; Rawlinson WD; Craig ME, 2020, 'Higher frequency of vertebrate-infecting viruses in the gut of infants born to mothers with type 1 diabetes', Pediatric Diabetes, vol. 21, pp. 271 - 279, http://dx.doi.org/10.1111/pedi.12952

Kim KW; Horton JL; Pang CNI; Jain K; Leung P; Isaacs SR; Bull RA; Luciani F; Wilkins MR; Catteau J; Lipkin WI; Rawlinson WD; Briese T; Craig ME, 2019, 'Higher abundance of enterovirus A species in the gut of children with islet autoimmunity', Scientific Reports, vol. 9, pp. 1749, http://dx.doi.org/10.1038/s41598-018-38368-8

Craig ME; Kim KW; Isaacs SR; Penno MA; Hamilton-Williams EE; Couper JJ; Rawlinson WD, 2019, 'Early-life factors contributing to type 1 diabetes', Diabetologia, vol. 62, pp. 1823 - 1834, http://dx.doi.org/10.1007/s00125-019-4942-x

Kim KW; Allen DW; Briese T; Couper JJ; Barry SC; Colman PG; Cotterill AM; Davis EA; Giles LC; Harrison LC; Harris M; Haynes A; Horton JL; Isaacs SR; Jain K; Lipkin WI; Morahan G; Morbey C; Pang ICN; Papenfuss AT; Penno MAS; Sinnott RO; Soldatos G; Thomson RL; Vuillermin PJ; Wentworth JM; Wilkins MR; Rawlinson WD; Craig ME, 2019, 'Distinct gut virome profile of pregnant women with type 1 diabetes in the ENDIA study', Open Forum Infectious Diseases, vol. 6, http://dx.doi.org/10.1093/ofid/ofz025

Isaacs SR; Kim KW; Cheng JX; Bull RA; Stelzer-Braid S; Luciani F; Rawlinson WD; Craig ME, 2018, 'Amplification and next generation sequencing of near full-length human enteroviruses for identification and characterisation from clinical samples', Scientific Reports, vol. 8, http://dx.doi.org/10.1038/s41598-018-30322-y

Allen DW; Kim KW; Rawlinson WD; Craig ME, 2018, 'Maternal virus infections in pregnancy and type 1 diabetes in their offspring: Systematic review and meta-analysis of observational studies', Reviews in Medical Virology, vol. 28, http://dx.doi.org/10.1002/rmv.1974

Isaacs SR; Wang J; Kim KW; Yin C; Zhou L; Mi QS; Craig ME, 2016, 'MicroRNAs in Type 1 Diabetes: Complex Interregulation of the Immune System, β Cell Function and Viral Infections', Current Diabetes Reports, vol. 16, http://dx.doi.org/10.1007/s11892-016-0819-2

Kim KW; Ho A; Alshabee-Akil A; Hardikar AA; Kay TWH; Rawlinson WD; Craig ME, 2016, 'Coxsackievirus B5 infection induces dysregulation of microRNAs predicted to target known type 1 diabetes risk genes in human pancreatic islets', Diabetes, vol. 65, pp. 996 - 1003, http://dx.doi.org/10.2337/db15-0956

Eamens AL; Kim KW; Curtin SJ; Waterhouse PM, 2012, 'DRB2 is required for microRNA biogenesis in Arabidopsis thaliana', PLoS ONE, vol. 7, pp. e35933 - e35933, http://dx.doi.org/10.1371/journal.pone.0035933

Eamens AL; Kim KW; Waterhouse PM, 2012, 'DRB2, DRB3 and DRB5 function in a non-canonical microRNA pathway in Arabidopsis thaliana', Plant Signaling and Behavior, vol. 7, pp. 1224 - 1229, http://dx.doi.org/10.4161/psb.21518

Kim KW; Deveson IW; Pang CNI; Yeang M; Naing Z; Adikari T; Hammond JM; Stevanovski I; Beukers AG; Verich A; Yin S; McFarlane D; Wilkins MR; Stelzer-Braid S; Bull RA; Craig ME; Hal SJV; Rawlinson WD, 'Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing', , http://dx.doi.org/10.21203/rs.3.rs-105996/v1

Conference Papers

Kim KW; Allen DW; Briese T; Pang CN; Jain K; Horton JL; Isaacs SR; Wilkins MR; Couper J; Penno MAS; Harrison LC; Morahan G; Harris M; Cotterill AM; Morbey C; Barry SC; Haynes A; Davis E; Colman P; Giles L; Dodd J; Wentworth J; Sinnott R; Papenfuss TA; Vuillermin P; Lipkin WI; Rawlinson WD; Craig ME, 2017, 'Gut Virome Dynamics during Pregnancy in Mothers with Type 1 Diabetes', in DIABETES, AMER DIABETES ASSOC, pp. LB51 - LB51, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000463087200189&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Horton JL; Kim KW; Pang CN; Jain K; Leung P; Isaacs SR; Bull RA; Luciani F; Wilkins MR; Lipkin WI; Rawlinson WD; Briese T; Craig ME, 2017, 'Virome-Capture Sequencing of the Gut and Plasma Virome in Children with Islet Autoimmunity', in DIABETES, AMER DIABETES ASSOC, pp. LB51 - LB52, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000463087200190&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Preprints

Bull RA; Adikari T; Ferguson JM; Hammond JM; Stevanovski I; Beukers AG; Naing Z; Yeang M; Verich A; Gamaarachchi H; Kim KW; Luciani F; Stelzer-Braid S; Eden J-S; Rawlinson WD; van Hal SJ; Deveson IW, Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis, http://dx.doi.org/10.1101/2020.08.04.236893


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