Journal articles
Fang Z; Duan C; Wang S; Fu L; Yang P; Yu T; Deel MD; Lau LMS; Ma X; Ni X; Su Y, 2024, 'Pediatric spindle cell/sclerosing rhabdomyosarcoma with FUS–TFCP2 fusion: a case report and literature review', Translational Pediatrics, 13, pp. 178 - 191, http://dx.doi.org/10.21037/tp-23-603
Mayoh C; Gifford AJ; Terry R; Lau LMS; Wong M; Rao P; Shai-Hee T; Saletta F; Khuong-Quang DA; Qin V; Mateos MK; Meyran D; Miller KE; Yuksel A; Mould EVA; Bowen-James R; Govender D; Senapati A; Zhukova N; Omer N; Dholaria H; Alvaro F; Tapp H; Diamond Y; Pozza LD; Moore AS; Nicholls W; Gottardo NG; McCowage G; Hansford JR; Khaw SL; Wood PJ; Catchpoole D; Cottrell CE; Mardis ER; Marshall GM; Tyrrell V; Haber M; Ziegler DS; Vittorio O; Trapani JA; Cowley MJ; Neeson PJ; Ekert PG, 2023, 'A novel transcriptional signature identifies T-cell infiltration in high-risk paediatric cancer', Genome Medicine, 15, http://dx.doi.org/10.1186/s13073-023-01170-x
Ajuyah P; Mayoh C; Lau LMS; Barahona P; Wong M; Chambers H; Valdes-Mora F; Senapati A; Gifford AJ; D’Arcy C; Hansford JR; Manoharan N; Nicholls W; Williams MM; Wood PJ; Cowley MJ; Tyrrell V; Haber M; Ekert PG; Ziegler DS; Khuong-Quang DA, 2023, 'Histone H3-wild type diffuse midline gliomas with H3K27me3 loss are a distinct entity with exclusive EGFR or ACVR1 mutation and differential methylation of homeobox genes', Scientific Reports, 13, http://dx.doi.org/10.1038/s41598-023-30395-4
Gereis JM; Hetherington K; Robertson EG; Daly R; Donoghoe MW; Ziegler DS; Marshall GM; Lau LMS; Marron JM; Wakefield CE, 2023, 'Parents’ and adolescents’ perspectives and understanding of information about childhood cancer precision medicine', Cancer, 129, pp. 3645 - 3655, http://dx.doi.org/10.1002/cncr.34914
Wakefield CE; Hetherington K; Robertson EG; Donoghoe MW; Hunter JD; Vetsch J; Marron JM; Tucker KM; Marshall GM; Broom A; Haber M; Tyrrell V; Malkin D; Lau L; Mateos MK; O’Brien TA; Ziegler DS, 2023, 'Hopes, concerns, satisfaction and regret in a precision medicine trial for childhood cancer: a mixed-methods study of parent and patient perspectives', British Journal of Cancer, 129, pp. 1634 - 1644, http://dx.doi.org/10.1038/s41416-023-02429-1
Mayoh C; Mao J; Xie J; Tax G; Chow SO; Cadiz R; Pazaky K; Barahona P; Ajuyah P; Trebilcock P; Malquori A; Gunther K; Avila A; Yun DY; Alfred S; Gopalakrishnan A; Kamili A; Wong M; Cowley MJ; Jessop S; Lau LMS; Trahair TN; Ziegler DS; Fletcher JI; Gifford AJ; Tsoli M; Marshall GM; Haber M; Tyrrell V; Failes TW; Arndt GM; Lock RB; Ekert PG; M Dolman ME; Wong-Erasmus M; Ajuyah P, 2023, 'High-Throughput Drug Screening of Primary Tumor Cells Identifies Therapeutic Strategies for Treating Children with High-Risk Cancer', Cancer Research, 83, pp. 2716 - 2732, http://dx.doi.org/10.1158/0008-5472.CAN-22-3702
Daly R; Hetherington K; Hazell E; Wadling BR; Tyrrell V; Tucker KM; Marshall GM; Ziegler DS; Lau LMS; Trahair TN; O’Brien TA; Collins K; Gifford AJ; Haber M; Pinese M; Malkin D; Cowley MJ; Karpelowsky J; Drew D; Jacobs C; Wakefield CE, 2023, 'Precision Medicine Is Changing the Roles of Healthcare Professionals, Scientists, and Research Staff: Learnings from a Childhood Cancer Precision Medicine Trial', Journal of Personalized Medicine, 13, http://dx.doi.org/10.3390/jpm13071033
Staunton J; Robertson PA; Harris A; Mayoh C; Wong M; Rumford M; Fuentes-Bolanos N; Cowley M; Lau L; Ziegler DS; Barahona P; Manoharan N, 2023, 'HGG-20. NOVEL PAEDIATRIC CASE OF A SPINAL HIGH-GRADE ASTROCYTOMA WITH PILOID FEATURES IN A PATIENT WITH NOONAN SYNDROME', Neuro-Oncology, 25, pp. i44 - i44, http://dx.doi.org/10.1093/neuonc/noad073.169
Cortés-Ciriano I; Lee JJK; Xi R; Jain D; Jung YL; Yang L; Gordenin D; Klimczak LJ; Zhang CZ; Pellman DS; Akdemir KC; Alvarez EG; Baez-Ortega A; Beroukhim R; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Dueso-Barroso A; Dunford AJ; Edwards PA; Estivill X; Etemadmoghadam D; Feuerbach L; Fink JL; Frenkel-Morgenstern M; Garsed DW; Gerstein M; Gordenin DA; Haan D; Haber JE; Hess JM; Hutter B; Imielinski M; Jones DTW; Ju YS; Kazanov MD; Koh Y; Korbel JO; Kumar K; Lee EA; Li Y; Lynch AG; Macintyre G; Markowetz F; Martincorena I; Martinez-Fundichely A; Miyano S; Nakagawa H; Navarro FCP; Ossowski S; Pearson JV; Puiggròs M; Rippe K; Roberts ND; Roberts SA; Rodriguez-Martin B; Schumacher SE; Scully R; Shackleton M; Sidiropoulos N; Sieverling L; Stewart C; Torrents D; Tubio JMC; Villasante I; Waddell N; Wala JA; Weischenfeldt J; Yang L; Yao X; Yoon SS; Zamora J; Park PJ; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F, 2023, 'Author Correction: Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing (Nature Genetics, (2020), 52, 3, (331-341), 10.1038/s41588-019-0576-7)', Nature Genetics, 55, pp. 1076, http://dx.doi.org/10.1038/s41588-023-01315-z
Yuan Y; Ju YS; Kim Y; Li J; Wang Y; Yoon CJ; Yang Y; Martincorena I; Creighton CJ; Weinstein JN; Xu Y; Han L; Kim HL; Nakagawa H; Park K; Campbell PJ; Liang H; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A; Niu B; Bell C; Beltran S; Benz C; Berchuck A; Bergmann AK; Bergstrom EN; Berman BP; Berney DM; Bernhart SH; Beroukhim R; Berrios M, 2023, 'Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)', Nature Genetics, 55, pp. 1078, http://dx.doi.org/10.1038/s41588-023-01317-x
Akdemir KC; Le VT; Chandran S; Li Y; Verhaak RG; Beroukhim R; Campbell PJ; Chin L; Dixon JR; Futreal PA; Akdemir KC; Alvarez EG; Baez-Ortega A; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Cortés-Ciriano I; Dueso-Barroso A; Dunford AJ; Edwards PA; Estivill X; Etemadmoghadam D; Feuerbach L; Fink JL; Frenkel-Morgenstern M; Garsed DW; Gerstein M; Gordenin DA; Haan D; Haber JE; Hess JM; Hutter B; Imielinski M; Jones DTW; Ju YS; Kazanov MD; Klimczak LJ; Koh Y; Korbel JO; Kumar K; Lee EA; Lee JJK; Li Y; Lynch AG; Macintyre G; Markowetz F; Martincorena I; Martinez-Fundichely A; Meyerson M; Miyano S; Nakagawa H; Navarro FCP; Ossowski S; Park PJ; Pearson JV; Puiggròs M; Rippe K; Roberts ND; Roberts SA; Rodriguez-Martin B; Schumacher SE; Scully R; Shackleton M; Sidiropoulos N; Sieverling L; Stewart C; Torrents D; Tubio JMC; Villasante I; Waddell N; Wala JA; Weischenfeldt J; Yang L; Yao X; Yoon SS; Zamora J; Zhang CZ; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A, 2023, 'Author Correction: Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer (Nature Genetics, (2020), 52, 3, (294-305), 10.1038/s41588-019-0564-y)', Nature Genetics, 55, pp. 1079, http://dx.doi.org/10.1038/s41588-023-01318-w
Rodriguez-Martin B; Alvarez EG; Baez-Ortega A; Zamora J; Supek F; Demeulemeester J; Santamarina M; Temes J; Garcia-Souto D; Detering H; Li Y; Rodriguez-Castro J; Dueso-Barroso A; Bruzos AL; Dentro SC; Blanco MG; Contino G; Ardeljan D; Tojo M; Roberts ND; Zumalave S; Edwards PA; Weischenfeldt J; Puiggròs M; Chong Z; Chen K; Lee EA; Wala JA; Raine KM; Butler A; Waszak SM; Navarro FCP; Schumacher SE; Monlong J; Maura F; Bolli N; Bourque G; Gerstein M; Park PJ; Wedge DC; Beroukhim R; Torrents D; Korbel JO; Martincorena I; Fitzgerald RC; Van Loo P; Kazazian HH; Burns KH; Akdemir KC; Alvarez EG; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Cortés-Ciriano I; Dunford AJ; Estivill X; Etemadmoghadam D; Feuerbach L; Fink JL; Frenkel-Morgenstern M; Garsed DW; Gordenin DA; Haan D; Haber JE; Hess JM; Hutter B; Imielinski M; Jones DTW; Ju YS; Kazanov MD; Klimczak LJ; Koh Y; Kumar K; Lee EA; Lee JJK; Li Y; Lynch AG; Macintyre G; Markowetz F; Martinez-Fundichely A; Meyerson M; Miyano S; Nakagawa H; Ossowski S; Park PJ; Pearson JV; Rippe K, 2023, 'Author Correction: Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition (Nature Genetics, (2020), 52, 3, (306-319), 10.1038/s41588-019-0562-0)', Nature Genetics, 55, pp. 1080, http://dx.doi.org/10.1038/s41588-023-01319-9
Zapatka M; Borozan I; Brewer DS; Iskar M; Grundhoff A; Alawi M; Desai N; Sültmann H; Moch H; Cooper CS; Desai N; Eils R; Ferretti V; Kleinheinz K; Lichter P; Nakagawa H; Ojesina AI; Pedamallu CS; Schlesner M; Su X; Cooper CS; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A, 2023, 'Author Correction: The landscape of viral associations in human cancers (Nature Genetics, (2020), 52, 3, (320-330), 10.1038/s41588-019-0558-9)', Nature Genetics, 55, pp. 1077, http://dx.doi.org/10.1038/s41588-023-01316-y
Fuentes Bolanos NA; Padhye B; Daley M; Hunter J; Hetherington K; Warby M; Courtney E; Kirk J; Josephi-Taylor S; Chen Y; Alvaro F; Barlow-Stewart K; Wong-Erasmus M; Barahona P; Ajuyah P; Altekoester AK; Tyrrell VJ; Lau LMS; Wakefield C; Sylvester D; Tucker K; Pinese M; Dalla Pozza L; O'Brien TA, 2023, 'Protocol for a comprehensive prospective cohort study of trio-based whole-genome sequencing for underlying cancer predisposition in paediatric and adolescent patients newly diagnosed with cancer: The PREDICT study', BMJ Open, 13, http://dx.doi.org/10.1136/bmjopen-2022-070082
Yuan Y; Ju YS; Kim Y; Li J; Wang Y; Yoon CJ; Yang Y; Martincorena I; Creighton CJ; Weinstein JN; Xu Y; Han L; Kim HL; Nakagawa H; Park K; Campbell PJ; Liang H; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A; Niu B; Bell C; Beltran S; Benz C; Berchuck A; Bergmann AK; Bergstrom EN; Berman BP; Berney DM; Bernhart SH; Beroukhim R; Berrios M, 2023, 'Author Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)', Nature Genetics, 55, pp. 892, http://dx.doi.org/10.1038/s41588-020-0629-y
Yuan Y; Ju YS; Kim Y; Li J; Wang Y; Yoon CJ; Yang Y; Martincorena I; Creighton CJ; Weinstein JN; Xu Y; Han L; Kim HL; Nakagawa H; Park K; Campbell PJ; Liang H; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A; Niu B; Bell C; Beltran S; Benz C; Berchuck A; Bergmann AK; Bergstrom EN; Berman BP; Berney DM; Bernhart SH; Beroukhim R; Berrios M, 2023, 'Publisher Correction: Comprehensive molecular characterization of mitochondrial genomes in human cancers (Nature Genetics, (2020), 52, 3, (342-352), 10.1038/s41588-019-0557-x)', Nature Genetics, 55, pp. 893, http://dx.doi.org/10.1038/s41588-020-0587-4
Yakneen S; Waszak SM; Aminou B; Bartolome J; Boroevich KA; Boyce R; Brooks AN; Buchanan A; Buchhalter I; Butler AP; Byrne NJ; Cafferkey A; Campbell PJ; Chen Z; Cho S; Choi W; Clapham P; Davis-Dusenbery BN; De La Vega FM; Demeulemeester J; Dow MT; Dursi LJ; Eils J; Eils R; Ellrott K; Farcas C; Favero F; Fayzullaev N; Ferretti V; Flicek P; Fonseca NA; Gelpi JL; Getz G; Gibson B; Grossman RL; Harismendy O; Heath AP; Heinold MC; Hess JM; Hofmann O; Hong JH; Hudson TJ; Hutter B; Hutter CM; Hübschmann D; Imoto S; Ivkovic S; Jeon SH; Jiao W; Jung J; Kabbe R; Kahles A; Kerssemakers JNA; Kim HL; Kim H; Kim J; Kim Y; Kleinheinz K; Koscher M; Koures A; Kovacevic M; Lawerenz C; Leshchiner I; Liu J; Livitz D; Mihaiescu GL; Mijalkovic S; Mijalkovic Lazic A; Miyano S; Miyoshi N; Nahal-Bose HK; Nakagawa H; Nastic M; Newhouse SJ; Nicholson J; O’Connor BD; Ocana D; Ohi K; Ohno-Machado L; Omberg L; Ouellette BFF; Paramasivam N; Perry MD; Pihl TD; Prinz M; Puiggròs M; Radovic P; Raine KM; Rheinbay E; Rosenberg M; Royo R; Rätsch G; Saksena G; Schlesner M; Shorser SI; Short C; Sofia HJ; Spring J; Stein LD; Struck AJ, 2023, 'Author Correction: Butler enables rapid cloud-based analysis of thousands of human genomes (Nature Biotechnology, (2020), 38, 3, (288-292), 10.1038/s41587-019-0360-3)', Nature Biotechnology, 41, pp. 577, http://dx.doi.org/10.1038/s41587-022-01554-1
Rheinbay E; Nielsen MM; Abascal F; Wala JA; Shapira O; Tiao G; Hornshøj H; Hess JM; Juul RI; Lin Z; Feuerbach L; Sabarinathan R; Madsen T; Kim J; Mularoni L; Shuai S; Lanzós A; Herrmann C; Maruvka YE; Shen C; Amin SB; Bandopadhayay P; Bertl J; Boroevich KA; Busanovich J; Carlevaro-Fita J; Chakravarty D; Chan CWY; Craft D; Dhingra P; Diamanti K; Fonseca NA; Gonzalez-Perez A; Guo Q; Hamilton MP; Haradhvala NJ; Hong C; Isaev K; Johnson TA; Juul M; Kahles A; Kahraman A; Kim Y; Komorowski J; Kumar K; Kumar S; Lee D; Lehmann KV; Li Y; Liu EM; Lochovsky L; Park K; Pich O; Roberts ND; Saksena G; Schumacher SE; Sidiropoulos N; Sieverling L; Sinnott-Armstrong N; Stewart C; Tamborero D; Tubio JMC; Umer HM; Uusküla-Reimand L; Wadelius C; Wadi L; Yao X; Zhang CZ; Zhang J; Haber JE; Hobolth A; Imielinski M; Kellis M; Lawrence MS; von Mering C; Nakagawa H; Raphael BJ; Rubin MA; Sander C; Stein LD; Stuart JM; Tsunoda T; Wheeler DA; Johnson R; Reimand J; Gerstein M; Khurana E; Campbell PJ; López-Bigas N; Amin SB; Bader GD; Barenboim J; Beroukhim R; Brunak S, 2023, 'Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes (Nature, (2020), 578, 7793, (102-111), 10.1038/s41586-020-1965-x)', Nature, 614, pp. E40, http://dx.doi.org/10.1038/s41586-022-05599-9
Calabrese C; Davidson NR; Demircioğlu D; Fonseca NA; He Y; Kahles A; Lehmann KV; Liu F; Shiraishi Y; Soulette CM; Urban L; Lehmann KV; Shiraishi Y; Greger L; Li S; Liu D; Perry MD; Xiang Q; Zhang F; Zhang J; Bailey P; Erkek S; Hoadley KA; Hou Y; Huska MR; Kilpinen H; Korbel JO; Marin MG; Markowski J; Nandi T; Pan-Hammarström Q; Pedamallu CS; Siebert R; Stark SG; Su H; Tan P; Waszak SM; Yung C; Zhu S; Awadalla P; Creighton CJ; Meyerson M; Ouellette BFF; Wu K; Yang H; Lehmann KV; Shiraishi Y; Perry MD; Liu D; Amin SB; Bailey P; Chateigner A; Cortés-Ciriano I; Craft B; Frenkel-Morgenstern M; Goldman M; Khurana E; Lamaze FC; Li C; Li X; Li X; Liu X; Nielsen MM; Ojesina AI; Park PJ, 2023, 'Author Correction: Genomic basis for RNA alterations in cancer (Nature, (2020), 578, 7793, (129-136), 10.1038/s41586-020-1970-0)', Nature, 614, pp. E37, http://dx.doi.org/10.1038/s41586-022-05596-y
Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A; Niu B; Bell C; Beltran S; Benz C; Berchuck A; Bergmann AK; Bergstrom EN; Berman BP; Berney DM; Bernhart SH; Beroukhim R; Berrios M; Bersani S; Bertl J; Betancourt M; Bhandari V; Bhosle SG; Biankin AV; Bieg M; Bigner D; Binder H; Birney E; Birrer M; Biswas NK; Bjerkehagen B; Bodenheimer T; Boice L; Bonizzato G; De Bono JS, 2023, 'Author Correction: Pan-cancer analysis of whole genomes (Nature, (2020), 578, 7793, (82-93), 10.1038/s41586-020-1969-6)', Nature, 614, pp. E39, http://dx.doi.org/10.1038/s41586-022-05598-w
Li Y; Roberts ND; Wala JA; Shapira O; Schumacher SE; Kumar K; Khurana E; Waszak S; Korbel JO; Haber JE; Imielinski M; Akdemir KC; Alvarez EG; Baez-Ortega A; Beroukhim R; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Cortés-Ciriano I; Dueso-Barroso A; Dunford AJ; Edwards PA; Estivill X; Etemadmoghadam D; Feuerbach L; Fink JL; Frenkel-Morgenstern M; Garsed DW; Gerstein M; Gordenin DA; Haan D; Hess JM; Hutter B; Jones DTW; Ju YS; Kazanov MD; Klimczak LJ; Koh Y; Lee EA; Lee JJK; Li Y; Lynch AG; Macintyre G; Markowetz F; Martincorena I; Martinez-Fundichely A; Meyerson M; Miyano S; Nakagawa H; Navarro FCP; Ossowski S; Park PJ; Pearson JV; Puiggròs M; Rippe K; Roberts ND; Roberts SA; Rodriguez-Martin B; Scully R; Shackleton M; Sidiropoulos N; Sieverling L; Stewart C; Torrents D; Tubio JMC; Villasante I; Waddell N; Weischenfeldt J; Yang L; Yao X; Yoon SS; Zamora J; Zhang CZ; Weischenfeldt J; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F, 2023, 'Author Correction: Patterns of somatic structural variation in human cancer genomes (Nature, (2020), 578, 7793, (112-121), 10.1038/s41586-019-1913-9)', Nature, 614, pp. E38, http://dx.doi.org/10.1038/s41586-022-05597-x
Gerstung M; Jolly C; Leshchiner I; Dentro SC; Gonzalez S; Rosebrock D; Mitchell TJ; Rubanova Y; Anur P; Yu K; Tarabichi M; Deshwar A; Wintersinger J; Kleinheinz K; Vázquez-García I; Haase K; Jerman L; Sengupta S; Macintyre G; Malikic S; Donmez N; Livitz DG; Cmero M; Demeulemeester J; Schumacher S; Fan Y; Yao X; Lee J; Schlesner M; Boutros PC; Bowtell DD; Zhu H; Getz G; Imielinski M; Beroukhim R; Sahinalp SC; Ji Y; Peifer M; Markowetz F; Mustonen V; Yuan K; Wang W; Morris QD; Gerstung M; Deshwar AG; Yu K; Adams DJ; Bowtell DD; Campbell PJ; Cao S; Christie EL; Cun Y; Dawson KJ; Drews RM; Eils R; Fan Y; Fittall M; Garsed DW; Ha G; Ji Y; Lee J; Lee-Six H; Martincorena I; Mitchell TJ; Oesper L; Peto M; Raphael BJ; Salcedo A; Shi R; Shin SJ; Spiro O, 2023, 'Author Correction: The evolutionary history of 2,658 cancers (Nature, (2020), 578, 7793, (122-128), 10.1038/s41586-019-1907-7)', Nature, 614, pp. E42, http://dx.doi.org/10.1038/s41586-022-05601-4
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Bailey MH; Meyerson WU; Dursi LJ; Wang LB; Dong G; Liang WW; Weerasinghe A; Li S; Li Y; Kelso S; Akbani R; Anur P; Bailey MH; Buchanan A; Chiotti K; Covington K; Creason A; Ding L; Ellrott K; Fan Y; Foltz S; Getz G; Hale W; Haussler D; Hess JM; Hutter CM; Kandoth C; Kasaian K; Kasapi M; Larson D; Leshchiner I; Letaw J; Ma S; McLellan MD; Men Y; Mills GB; Niu B; Peto M; Radenbaugh A; Reynolds SM; Saksena G; Sofia H; Stewart C; Struck AJ; Stuart JM; Wang W; Weinstein JN; Wheeler DA; Wong CK; Xi L; Ye K; Bailey MH; Niu B; Bieg M; Boutros PC; Buchhalter I; Butler AP; Chen K; Chong Z; Ding L; Drechsel O; Jonathan Dursi L; Eils R; Ellrott K; Espiritu SMG; Fan Y; Fulton RS; Gao S; Gelpi JLL; Gerstein MB; Gonzalez S; Gut IG; Hach F; Heinold MC; Hess JM; Hinton J; Hu T; Huang V; Huang Y; Hutter B; Jones DR; Jung J; Jäger N; Kim HL; Kleinheinz K; Kumar S; Kumar Y; Lalansingh CM; Letunic I; Livitz D; Ma EZ; Maruvka YE; Mashl RJ; McLellan MD; Menzies A; Milovanovic A; Nielsen MM; Ossowski S; Toon CCW; Merrett N; Pinese M; Lau L; Chou A; Biankin A; Johns A, 2020, 'Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples (Nature Communications, (2020), 11, 1, (4748), 10.1038/s41467-020-18151-y)', Nature Communications, 11, pp. 6232, http://dx.doi.org/10.1038/s41467-020-20128-w
Shuai S; Abascal F; Amin SB; Bader GD; Bandopadhayay P; Barenboim J; Beroukhim R; Bertl J; Boroevich KA; Brunak S; Campbell PJ; Carlevaro-Fita J; Chakravarty D; Chan CWY; Chen K; Choi JK; Deu-Pons J; Dhingra P; Diamanti K; Feuerbach L; Fink JL; Fonseca NA; Frigola J; Gambacorti-Passerini C; Garsed DW; Gerstein M; Getz G; Guo Q; Gut IG; Haan D; Hamilton MP; Haradhvala NJ; Harmanci AO; Helmy M; Herrmann C; Hess JM; Hobolth A; Hodzic E; Hong C; Hornshøj H; Isaev K; Izarzugaza JMG; Johnson R; Johnson TA; Juul M; Juul RI; Kahles A; Kahraman A; Kellis M; Khurana E; Kim J; Kim JK; Kim Y; Komorowski J; Korbel JO; Kumar S; Lanzós A; Larsson E; Lawrence MS; Lee D; Lehmann KV; Li S; Li X; Lin Z; Liu EM; Lochovsky L; Lou S; Madsen T; Marchal K; Martincorena I; Martinez-Fundichely A; Maruvka YE; McGillivray PD; Meyerson W; Muiños F; Mularoni L; Nakagawa H; Nielsen MM; Paczkowska M; Park K; Park K; Pedersen JS; Pons T; Pulido-Tamayo S; Raphael BJ; Reimand J; Reyes-Salazar I; Reyna MA; Rheinbay E; Rubin MA; Rubio-Perez C; Sahinalp SC; Saksena G; Salichos L; Sander C; Schumacher SE; Shackleton M; Shapira O; Shen C; Shrestha R, 2020, 'Combined burden and functional impact tests for cancer driver discovery using DriverPower', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-019-13929-1
Bhandari V; Li CH; Bristow RG; Boutros PC; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O; Anderson MJ; Ang Y; Antonello D; Anur P; Aparicio S; Appelbaum EL; Arai Y; Aretz A; Arihiro K; Ariizumi SI; Armenia J; Arnould L; Asa S; Assenov Y; Atwal G; Aukema S; Auman JT; Aure MRR; Awadalla P; Aymerich M; Bader GD; Baez-Ortega A; Bailey MH; Bailey PJ; Balasundaram M; Balu S; Bandopadhayay P; Banks RE; Barbi S; Barbour AP; Barenboim J; Barnholtz-Sloan J; Barr H; Barrera E; Bartlett J; Bartolome J; Bassi C; Bathe OF; Baumhoer D; Bavi P; Baylin SB; Bazant W; Beardsmore D; Beck TA; Behjati S; Behren A; Niu B; Bell C; Beltran S; Benz C; Berchuck A; Bergmann AK; Bergstrom EN; Berman BP; Berney DM; Bernhart SH; Beroukhim R; Berrios M; Bersani S; Bertl J; Betancourt M; Bhosle SG; Biankin AV; Bieg M; Bigner D; Binder H; Birney E; Birrer M; Biswas NK; Bjerkehagen B, 2020, 'Divergent mutational processes distinguish hypoxic and normoxic tumours', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-019-14052-x
Sieverling L; Hong C; Koser SD; Ginsbach P; Kleinheinz K; Hutter B; Braun DM; Cortés-Ciriano I; Xi R; Kabbe R; Park PJ; Eils R; Schlesner M; Akdemir KC; Alvarez EG; Baez-Ortega A; Beroukhim R; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Dueso-Barroso A; Dunford AJ; Edwards PA; Estivill X; Etemadmoghadam D; Feuerbach L; Fink JL; Frenkel-Morgenstern M; Garsed DW; Gerstein M; Gordenin DA; Haan D; Haber JE; Hess JM; Imielinski M; Jones DTW; Ju YS; Kazanov MD; Klimczak LJ; Koh Y; Korbel JO; Kumar K; Lee EA; Lee JJK; Li Y; Lynch AG; Macintyre G; Markowetz F; Martincorena I; Martinez-Fundichely A; Meyerson M; Miyano S; Nakagawa H; Navarro FCP; Ossowski S; Pearson JV; Puiggròs M; Rippe K; Roberts ND; Roberts SA; Rodriguez-Martin B; Schumacher SE; Scully R; Shackleton M; Sidiropoulos N; Stewart C; Torrents D; Tubio JMC; Villasante I; Waddell N; Wala JA; Weischenfeldt J; Yang L; Yao X; Yoon SS; Zamora J; Zhang CZ; Jones DTW; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H, 2020, 'Genomic footprints of activated telomere maintenance mechanisms in cancer', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-019-13824-9
Zhang Y; Chen F; Fonseca NA; He Y; Fujita M; Nakagawa H; Zhang Z; Brazma A; Amin SB; Awadalla P; Bailey PJ; Brooks AN; Calabrese C; Chateigner A; Cortés-Ciriano I; Craft B; Craft D; Creighton CJ; Davidson NR; Demircioğlu D; Erkek S; Frenkel-Morgenstern M; Goldman MJ; Greger L; Göke J; He Y; Hoadley KA; Hou Y; Huska MR; Kahles A; Khurana E; Kilpinen H; Korbel JO; Lamaze FC; Lehmann KV; Li C; Li S; Li X; Li X; Liu D; Liu F; Liu X; Marin MG; Markowski J; Meyerson M; Nandi T; Nielsen MM; Ojesina AI; Ouellette BFF; Pan-Hammarström Q; Park PJ; Pedamallu CS; Pedersen JS; Perry MD; Rätsch G; Schwarz RF; Shiraishi Y; Siebert R; Soulette CM; Stark SG; Stegle O; Su H; Tan P; Teh BT; Urban L; Wang J; Waszak SM; Wu K; Xiang Q; Xiong H; Yakneen S; Yang H; Ye C; Yung CK; Zhang F; Zhang J; Zhang X; Zhang Z; Zheng L; Zhu J; Zhu S; Akdemir KC; Alvarez EG; Baez-Ortega A; Beroukhim R; Boutros PC; Bowtell DDL; Brors B; Burns KH; Campbell PJ; Chan K; Chen K; Dueso-Barroso A; Dunford AJ; Edwards PA; Estivill X; Etemadmoghadam D, 2020, 'High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-019-13885-w
Cmero M; Yuan K; Ong CS; Schröder J; Adams DJ; Anur P; Beroukhim R; Boutros PC; Bowtell DDL; Campbell PJ; Cao S; Christie EL; Cun Y; Dawson KJ; Demeulemeester J; Dentro SC; Deshwar AG; Donmez N; Drews RM; Eils R; Fan Y; Fittall MW; Garsed DW; Gerstung M; Getz G; Gonzalez S; Ha G; Haase K; Imielinski M; Jerman L; Ji Y; Jolly C; Kleinheinz K; Lee J; Lee-Six H; Leshchiner I; Livitz D; Malikic S; Martincorena I; Mitchell TJ; Morris QD; Mustonen V; Oesper L; Peifer M; Peto M; Raphael BJ; Rosebrock D; Rubanova Y; Sahinalp SC; Salcedo A; Schlesner M; Schumacher SE; Sengupta S; Shi R; Shin SJ; Spellman PT; Spiro O; Stein LD; Tarabichi M; Van Loo P; Vembu S; Vázquez-García I; Wang W; Wedge DC; Wheeler DA; Wintersinger JA; Yang TP; Yao X; Yu K; Zhu H; Corcoran NM; Papenfuss T; Hovens CM; Markowetz F; Macintyre G; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F; Amin SB; Aminou B; Ammerpohl O, 2020, 'Inferring structural variant cancer cell fraction', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-14351-8
Paczkowska M; Barenboim J; Sintupisut N; Fox NS; Zhu H; Abd-Rabbo D; Mee MW; Boutros PC; Abascal F; Amin SB; Bader GD; Beroukhim R; Bertl J; Boroevich KA; Brunak S; Campbell PJ; Carlevaro-Fita J; Chakravarty D; Chan CWY; Chen K; Choi JK; Deu-Pons J; Dhingra P; Diamanti K; Feuerbach L; Fink JL; Fonseca NA; Frigola J; Gambacorti-Passerini C; Garsed DW; Gerstein M; Getz G; Gonzalez-Perez A; Guo Q; Gut IG; Haan D; Hamilton MP; Haradhvala NJ; Harmanci AO; Helmy M; Herrmann C; Hess JM; Hobolth A; Hodzic E; Hong C; Hornshøj H; Isaev K; Izarzugaza JMG; Johnson R; Johnson TA; Juul M; Juul RI; Kahles A; Kahraman A; Kellis M; Khurana E; Kim J; Kim JK; Kim Y; Komorowski J; Korbel JO; Kumar S; Lanzós A; Lawrence MS; Lee D; Lehmann KV; Li S; Li X; Lin Z; Liu EM; Lochovsky L; Lou S; Madsen T; Marchal K; Martincorena I; Martinez-Fundichely A; Maruvka YE; McGillivray PD; Meyerson W; Muiños F; Mularoni L; Nakagawa H; Nielsen MM; Park K; Park K; Pedersen JS; Pich O; Pons T; Pulido-Tamayo S; Raphael BJ; Reyes-Salazar I; Reyna MA; Rheinbay E; Rubin MA; Rubio-Perez C; Sabarinathan R; Sahinalp SC; Saksena G; Salichos L; Sander C, 2020, 'Integrative pathway enrichment analysis of multivariate omics data', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-019-13983-9
Reyna MA; Haan D; Paczkowska M; Verbeke LPC; Vazquez M; Kahraman A; Pulido-Tamayo S; Barenboim J; Wadi L; Dhingra P; Shrestha R; Getz G; Lawrence MS; Pedersen JS; Rubin MA; Wheeler DA; Brunak S; Izarzugaza JMG; Khurana E; Marchal K; von Mering C; Sahinalp SC; Valencia A; Abascal F; Amin SB; Bader GD; Bandopadhayay P; Beroukhim R; Bertl J; Boroevich KA; Busanovich J; Campbell PJ; Carlevaro-Fita J; Chakravarty D; Chan CWY; Chen K; Choi JK; Deu-Pons J; Diamanti K; Feuerbach L; Fink JL; Fonseca NA; Frigola J; Gambacorti-Passerini C; Garsed DW; Gerstein M; Guo Q; Gut IG; Hamilton MP; Haradhvala NJ; Harmanci AO; Helmy M; Herrmann C; Hess JM; Hobolth A; Hodzic E; Hong C; Hornshøj H; Isaev K; Johnson R; Johnson TA; Juul M; Juul RI; Kahles A; Kellis M; Kim J; Kim JK; Kim Y; Komorowski J; Korbel JO; Kumar S; Lanzós A; Larsson E; Lee D; Lehmann KV; Li S; Li X; Lin Z; Liu EM; Lochovsky L; Lou S; Madsen T; Martincorena I; Martinez-Fundichely A; Maruvka YE; McGillivray PD; Meyerson W; Muiños F; Mularoni L; Nakagawa H; Nielsen MM; Park K; Park K; Pons T; Reyes-Salazar I; Rheinbay E; Rubio-Perez C; Saksena G; Salichos L; Sander C, 2020, 'Pathway and network analysis of more than 2500 whole cancer genomes', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-14367-0
Rubanova Y; Shi R; Harrigan CF; Li R; Wintersinger J; Sahin N; Deshwar AG; Dentro SC; Leshchiner I; Gerstung M; Jolly C; Haase K; Tarabichi M; Yu K; Gonzalez S; Macintyre G; Adams DJ; Anur P; Beroukhim R; Boutros PC; Bowtell DD; Campbell PJ; Cao S; Christie EL; Cmero M; Cun Y; Dawson KJ; Demeulemeester J; Donmez N; Drews RM; Eils R; Fan Y; Fittall M; Garsed DW; Getz G; Ha G; Imielinski M; Jerman L; Ji Y; Kleinheinz K; Lee J; Lee-Six H; Livitz DG; Malikic S; Markowetz F; Martincorena I; Mitchell TJ; Mustonen V; Oesper L; Peifer M; Peto M; Raphael BJ; Rosebrock D; Sahinalp SC; Salcedo A; Schlesner M; Schumacher S; Sengupta S; Shin SJ; Spiro O; Stein LD; Vázquez-García I; Vembu S; Wheeler DA; Yang TP; Yao X; Yuan K; Zhu H; Wang W; Morris QD; Spellman PT; Wedge DC; Van Loo P; Morris QD; Aaltonen LA; Abascal F; Abeshouse A; Aburatani H; Adams DJ; Agrawal N; Ahn KS; Ahn SM; Aikata H; Akbani R; Akdemir KC; Al-Ahmadie H; Al-Sedairy ST; Al-Shahrour F; Alawi M; Albert M; Aldape K; Alexandrov LB; Ally A; Alsop K; Alvarez EG; Amary F, 2020, 'Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-14352-7
Khuong-Quang DA; Brown LM; Wong M; Mayoh C; Sexton-Oates A; Kumar A; Pinese M; Nagabushan S; Lau L; Ludlow LE; Gifford AJ; Rodriguez M; Desai J; Fox SB; Haber M; Ziegler DS; Hansford JR; Marshall GM; Cowley MJ; Ekert PG; Wong-Erasmus M, 2020, 'Recurrent SPECC1L–NTRK fusions in pediatric sarcoma and brain tumors', Cold Spring Harbor Molecular Case Studies, 6, pp. mcs.a005710, http://dx.doi.org/10.1101/MCS.A005710
Bailey MH; Meyerson WU; Dursi LJ; Wang LB; Dong G; Liang WW; Weerasinghe A; Li S; Kelso S; Akbani R; Anur P; Bailey MH; Buchanan A; Chiotti K; Covington K; Creason A; Ding L; Ellrott K; Fan Y; Foltz S; Getz G; Hale W; Haussler D; Hess JM; Hutter CM; Kandoth C; Kasaian K; Kasapi M; Larson D; Leshchiner I; Letaw J; Ma S; McLellan MD; Men Y; Mills GB; Niu B; Peto M; Radenbaugh A; Reynolds SM; Saksena G; Sofia H; Stewart C; Struck AJ; Stuart JM; Wang W; Weinstein JN; Wheeler DA; Wong CK; Xi L; Ye K; Bailey MH; Niu B; Bieg M; Boutros PC; Buchhalter I; Butler AP; Chen K; Chong Z; Ding L; Drechsel O; Jonathan Dursi L; Eils R; Espiritu SMG; Fan Y; Fulton RS; Gao S; Gelpi JLL; Gonzalez S; Gut IG; Hach F; Heinold MC; Hess JM; Hinton J; Hu T; Huang V; Huang Y; Hutter B; Jones DR; Jung J; Jäger N; Kim HL; Kleinheinz K; Kumar S; Kumar Y; Lalansingh CM; Letunic I; Livitz D; Ma EZ; Maruvka YE; Mashl RJ; Menzies A; Milovanovic A; Nielsen MM; Ossowski S; Paramasivam N; Pedersen JS; Perry MD; Puiggròs M; Raine KM; Toon CCW; Biankin A; Merrett N; Pinese M; Lau L; Gill A; Chou A; Johns A, 2020, 'Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples', Nature Communications, 11, pp. 4748, http://dx.doi.org/10.1038/s41467-020-18151-y
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