By Dr Raymond Hall Yip Louie

Journal articles

Louie RHY; Cai C; Samir J; Singh M; Deveson IW; Ferguson JM; Amos TG; McGuire HM; Gowrishankar K; Adikari T; Balderas R; Bonomi M; Ruella M; Bishop D; Gottlieb D; Blyth E; Micklethwaite K; Luciani F, 2023, 'CAR⁺ and CAR⁻ T cells share a differentiation trajectory into an NK-like subset after CD19 CAR T cell infusion in patients with B cell malignancies', Nature Communications, 14, http://dx.doi.org/10.1038/s41467-023-43656-7

Yang Y; Louie R; Puc J; Vedvyas Y; Alcaina Y; Min IM; Britz M; Luciani F; Jin MM, 2023, 'Chimeric Antigen Receptor T Cell Therapy Targeting Epithelial Cell Adhesion Molecule in Gastric Cancer: Mechanisms of Tumor Resistance', Cancers, 15, http://dx.doi.org/10.3390/cancers15235552

Gupta M; Balachandran H; Louie RHY; Li H; Agapiou D; Keoshkerian E; Christ D; Rawlinson W; Mina MM; Post JJ; Hudson B; Gilroy N; Konecny P; Bartlett AW; Sasson SC; Ahlenstiel G; Dwyer D; Lloyd AR; Martinello M; Luciani F; Bull RA, 2023, 'High activation levels maintained in receptor-binding domain–specific memory B cells in people with severe coronavirus disease 2019', Immunology and Cell Biology, 101, pp. 142 - 155, http://dx.doi.org/10.1111/imcb.12607

Cai C; Samir J; Pirozyan MR; Adikari TN; Gupta M; Leung P; Hughes B; Van der Byl W; Rizzetto S; Elthala A; Keoshkerian E; Palgen JL; Peters T; Nguyen THO; Louie R; Kedzierska K; Gaudieri S; Bull RA; Lloyd AR; Luciani F, 2022, 'Identification of human progenitors of exhausted CD8⁺ T cells associated with elevated IFN-γ response in early phase of viral infection', Nature Communications, 13, http://dx.doi.org/10.1038/s41467-022-35281-7

Sohail MS; Louie RHY; Hong Z; Barton JP; Mckay MR, 2022, 'Inferring Epistasis from Genetic Time-series Data', Molecular Biology and Evolution, 39, http://dx.doi.org/10.1093/molbev/msac199

Micklethwaite KP; Gowrishankar K; Gloss BS; Li Z; Street JA; Moezzi L; Mach MA; Sutrave G; Clancy LE; Bishop DC; Louie RHY; Cai C; Foox J; MacKay M; Sedlazeck FJ; Blombery P; Mason CE; Luciani F; Gottlieb DJ; Blyth E, 2021, 'Investigation of product-derived lymphoma following infusion of piggyBac-modified CD19 chimeric antigen receptor T cells', Blood, 138, pp. 1391 - 1405, http://dx.doi.org/10.1182/blood.2021010858

Sohail MS; Louie RHY; McKay MR; Barton JP, 2021, 'MPL resolves genetic linkage in fitness inference from complex evolutionary histories', Nature Biotechnology, 39, pp. 472 - 479, http://dx.doi.org/10.1038/s41587-020-0737-3

Louie RHY; Luciani F, 2021, 'Recent advances in single-cell multimodal analysis to study immune cells', Immunology and Cell Biology, 99, pp. 157 - 167, http://dx.doi.org/10.1111/imcb.12432

Quadeer AA; McKay MR; Barton JP; Louie RHY, 2020, 'MPF-BML: A standalone GUI-based package for maximum entropy model inference', Bioinformatics, 36, pp. 2278 - 2279, http://dx.doi.org/10.1093/bioinformatics/btz925

Quadeer AA; Louie RHY; McKay MR, 2019, 'Identifying immunologically-vulnerable regions of the HCV E2 glycoprotein and broadly neutralizing antibodies that target them', Nature Communications, 10, http://dx.doi.org/10.1038/s41467-019-09819-1

Louie RHY; Kaczorowski KJ; Barton JP; Chakraborty AK; McKay MR, 2018, 'Fitness landscape of the human immunodeficiency virus envelope protein that is targeted by antibodies', Proceedings of the National Academy of Sciences of the United States of America, 115, pp. E564 - E573, http://dx.doi.org/10.1073/pnas.1717765115

Knaus A; Pantel JT; Pendziwiat M; Hajjir N; Zhao M; Hsieh TC; Schubach M; Gurovich Y; Fleischer N; Jäger M; Köhler S; Muhle H; Korff C; Møller RS; Bayat A; Calvas P; Chassaing N; Warren H; Skinner S; Louie R; Evers C; Bohn M; Christen HJ; van den Born M; Obersztyn E; Charzewska A; Endziniene M; Kortüm F; Brown N; Robinson PN; Schelhaas HJ; Weber Y; Helbig I; Mundlos S; Horn D; Krawitz PM, 2018, 'Characterization of glycosylphosphatidylinositol biosynthesis defects by clinical features, flow cytometry, and automated image analysis', Genome Medicine, 10, http://dx.doi.org/10.1186/s13073-017-0510-5

Wu Y; Louie RHY; McKay MR, 2016, 'Asymptotic Outage Probability of MIMO-MRC Systems in Double-Correlated Rician Environments', IEEE Transactions on Wireless Communications, 15, pp. 367 - 376, http://dx.doi.org/10.1109/TWC.2015.2473167

Morales-Jimenez D; Louie RHY; McKay MR; Chen Y, 2015, 'Analysis and Design of Multiple-Antenna Cognitive Radios with Multiple Primary User Signals', IEEE Transactions on Signal Processing, 63, pp. 4925 - 4939, http://dx.doi.org/10.1109/TSP.2015.2448528

Louie RHY; Hardjawana W; Li Y; Vucetic B, 2014, 'Distributed multiple-access for smart grid home area networks: Compressed sensing with multiple antennas', IEEE Transactions on Smart Grid, 5, pp. 2938 - 2946, http://dx.doi.org/10.1109/TSG.2014.2320925

Chen H; Li Y; Louie RHY; Vucetic B, 2014, 'Autonomous demand side management based on energy consumption scheduling and instantaneous load billing: An aggregative game approach', IEEE Transactions on Smart Grid, 5, pp. 1744 - 1754, http://dx.doi.org/10.1109/TSG.2014.2311122

Bayat S; Louie RHY; Han Z; Vucetic B; Li Y, 2014, 'Distributed user association and femtocell allocation in heterogeneous wireless networks', IEEE Transactions on Communications, 62, pp. 3027 - 3043, http://dx.doi.org/10.1109/TCOMM.2014.2339313

Quadeer AA; Louie RHY; Shekhar K; Chakraborty AK; Hsing IM; McKay MR, 2014, 'Statistical linkage analysis of substitutions in patient-derived sequences of genotype 1a Hepatitis C virus nonstructural protein 3 exposes targets for immunogen design', Journal of Virology, 88, pp. 7628 - 7644, http://dx.doi.org/10.1128/JVI.03812-13

Bayat S; Louie RHY; Han Z; Vucetic B; Li Y, 2013, 'Physical-layer security in distributed wireless networks using matching theory', IEEE Transactions on Information Forensics and Security, 8, pp. 717 - 732, http://dx.doi.org/10.1109/TIFS.2013.2251335

Wu Y; Louie RHY; McKay MR, 2013, 'Analysis and design of wireless ad hoc networks with channel estimation errors', IEEE Transactions on Signal Processing, 61, pp. 1447 - 1459, http://dx.doi.org/10.1109/TSP.2012.2237167

Bayat S; Louie RHY; Vucetic B; Li Y, 2013, 'Dynamic decentralised algorithms for cognitive radio relay networks with multiple primary and secondary users utilising matching theory', Transactions on emerging telecommunications technologies, 24, pp. 486 - 502, http://dx.doi.org/10.1002/ett.2663

Wu Y; Louie RHY; McKay MR; Collings IB, 2012, 'Generalized framework for the analysis of linear MIMO transmission schemes in decentralized wireless ad hoc networks', IEEE Transactions on Wireless Communications, 11, pp. 2815 - 2827, http://dx.doi.org/10.1109/TWC.2012.051712.110840

Manna R; Louie RHY; Li Y; Vucetic B, 2011, 'Cooperative spectrum sharing in cognitive radio networks with multiple antennas', IEEE Transactions on Signal Processing, 59, pp. 5509 - 5522, http://dx.doi.org/10.1109/TSP.2011.2163068

Louie RHY; McKay MR; Collings IB, 2011, 'Open-loop spatial multiplexing and diversity communications in ad hoc networks', IEEE Transactions on Information Theory, 57, pp. 317 - 344, http://dx.doi.org/10.1109/TIT.2010.2090222

Elkashlan M; Yeoh PL; Louie RHY; Collings IB, 2010, 'On the exact and asymptotic ser of receive diversity with multiple amplify-and-forward relays', IEEE Transactions on Vehicular Technology, 59, pp. 4602 - 4608, http://dx.doi.org/10.1109/TVT.2010.2076306

Li Y; Louie RHY; Vucetic B, 2010, 'Relay selection with network coding in two-way relay channels', IEEE Transactions on Vehicular Technology, 59, pp. 4489 - 4499, http://dx.doi.org/10.1109/TVT.2010.2070817

Louie RHY; Li Y; Vucetic B, 2010, 'Practical physical layer network coding for two-way relay channels: Performance analysis and comparison', IEEE Transactions on Wireless Communications, 9, pp. 764 - 777, http://dx.doi.org/10.1109/TWC.2010.02.090314

Louie RHY; Li Y; Vucetic B, 2010, 'Zero forcing in general two-hop relay networks', IEEE Transactions on Vehicular Technology, 59, pp. 191 - 202, http://dx.doi.org/10.1109/TVT.2009.2026481

Louie RHY; McKay MR; Collings IB, 2009, 'Maximum sum-rate of mimo multiuser scheduling with linear receivers', IEEE Transactions on Communications, 57, pp. 3500 - 3510, http://dx.doi.org/10.1109/TCOMM.2009.11.080210

Louie RHY; McKay MR; Collings IB, 2009, 'New performance results for multiuser optimum combining in the presence of rician fading', IEEE Transactions on Communications, 57, pp. 2348 - 2358, http://dx.doi.org/10.1109/TCOMM.2009.08.070412

Louie RHY; Li Y; Suraweera HA; Vucetic B, 2009, 'Performance analysis of beamforming in two hop amplify and forward relay networks with antenna correlation', IEEE Transactions on Wireless Communications, 8, pp. 3132 - 3141, http://dx.doi.org/10.1109/TWC.2009.080807

Suraweera HA; Louie RHY; Li Y; Karagiannidis GK; Vucetic B, 2009, 'Two hop amplify-and-forward transmission in mixed Rayleigh and Rician fading channels', IEEE Communications Letters, 13, pp. 227 - 229, http://dx.doi.org/10.1109/LCOMM.2009.081943

Louie RHY; McKay MR; Collings TB, 2008, 'Impact of correlation on the capacity of multiple access and broadcast channels with MIMO-MRC', IEEE Transactions on Wireless Communications, 7, pp. 2397 - 2407, http://dx.doi.org/10.1109/TWC.2008.070126

Conference Papers

Singh M; Louie R; Milthopre C; Adikari T; Hardy M; Faulks M; Field M; Ahlenstiel G; Tye-Din J; Luciani F; Goodnow CC, 2023, 'Multi-omic profiling in coeliac disease reveals somatic driver mutations in rogue T cell clones', in JOURNAL OF IMMUNOLOGY, AMER ASSOC IMMUNOLOGISTS, DC, Washington, presented at Annual Meeting of the American-Association-of-Immunologists (AAI), DC, Washington, 11 May 2023 - 15 May 2023

Louie R; Cai C; Balraj V; Singh M; Jackson K; Deveson I; Ferguson J; Amos T; Gowrishankar K; Bishop D; Blyth E; Gottlieb D; Micklethwaite K; Luciani F, 2021, 'Single cell multi-omics identifies evolving phenotypes of CAR CD19 and endogenous T cell clones', in EUROPEAN JOURNAL OF IMMUNOLOGY, WILEY, pp. 412 - 412, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000753366402197&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Adikari TN; Singh M; Munier ML; Louie R; Samir J; Balraj V; Cai C; Hardy MY; John JR; Reid H; Kelleher AD; Din JAT; Goodnow C; Luciani F, 2021, 'Single cell RNA sequencing of gluten-specific CD4+T cells reveals a novel gene expression pattern with NK-like cytotoxicity', in EUROPEAN JOURNAL OF IMMUNOLOGY, WILEY, pp. 96 - 96, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000753366400285&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Quadeer AA; Louie RHY; Shekhar K; Chakraborty AK; Hsing I; McKay MR, 2014, 'Discovering statistical vulnerabilities in highly mutable viruses: A random matrix approach', in IEEE Workshop on Statistical Signal Processing Proceedings, pp. 5 - 8, http://dx.doi.org/10.1109/SSP.2014.6884561

Louie RHY; McKay MR; Chen Y, 2014, 'Multiple-antenna signal detection in cognitive radio networks with multiple primary user signals', in 2014 IEEE International Conference on Communications, ICC 2014, pp. 4951 - 4956, http://dx.doi.org/10.1109/ICC.2014.6884105

Zhu J; Louie RHY; McKay MR; Govindasamy S, 2014, 'On the impact of unsynchronized interferers on multi-antenna OFDM systems', in 2014 IEEE International Conference on Communications, ICC 2014, pp. 2203 - 2208, http://dx.doi.org/10.1109/ICC.2014.6883650

Chen HH; Louie RHY; Li Y; Wang P; Vucetic B, 2013, 'A variational inequality approach to instantaneous load pricing based demand side management for future smart grid', in IEEE International Conference on Communications, pp. 4250 - 4254, http://dx.doi.org/10.1109/ICC.2013.6655231

Wu Y; Louie RHY; McKay MR, 2013, 'Impact of training on multiple-antenna communications in wireless ad hoc networks', in Conference Record - Asilomar Conference on Signals, Systems and Computers, pp. 1324 - 1329, http://dx.doi.org/10.1109/ACSSC.2013.6810509

Bayat S; Louie RHY; Han Z; Li Y; Vucetic B, 2012, 'Multiple operator and multiple femtocell networks: Distributed stable matching', in IEEE International Conference on Communications, pp. 5140 - 5145, http://dx.doi.org/10.1109/ICC.2012.6363955

Bayat S; Louie RHY; Li Y; Ng SX; Vucetic B, 2012, 'Distributed algorithm for multiple antenna cooperative cognitive radio networks with multiple primary and secondary users', in Progress in Electromagnetics Research Symposium, pp. 297 - 302

Wu Y; Louie RHY; McKay MR, 2012, 'Impact of training on the transmission capacity of wireless ad hoc networks', in ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings, pp. 3133 - 3136, http://dx.doi.org/10.1109/ICASSP.2012.6288579

Bayat S; Louie RHY; Han Z; Li Y; Vucetic B, 2012, 'Distributed stable matching algorithm for physical layer security with multiple source-destination pairs and jammer nodes', in IEEE Wireless Communications and Networking Conference, WCNC, pp. 2688 - 2693, http://dx.doi.org/10.1109/WCNC.2012.6214256

Louie RHY; Hardjawana W; Li Y; Vucetic B, 2012, 'Distributed multiple-access for wireless communications: Compressed sensing with multiple antennas', in Proceedings - IEEE Global Communications Conference, GLOBECOM, pp. 3622 - 3627, http://dx.doi.org/10.1109/GLOCOM.2012.6503678

Bayat S; Louie RHY; Li Y; Vucetic B, 2011, 'Cognitive radio relay networks with multiple primary and secondary users: Distributed stable matching algorithms for spectrum access', in IEEE International Conference on Communications, http://dx.doi.org/10.1109/icc.2011.5962935

Louie RHY; McKay MR; Jindal N; Collings IB, 2011, 'Spatial multiplexing with MMSE receivers in ad hoc networks', in IEEE International Conference on Communications, http://dx.doi.org/10.1109/icc.2011.5963372

Wu Y; Louie RHY; McKay MR; Collings IB, 2010, 'MIMO beamforming with quantized feedback in ad hoc networks: Transmission capacity analysis', in Conference Record - Asilomar Conference on Signals, Systems and Computers, pp. 1582 - 1587, http://dx.doi.org/10.1109/ACSSC.2010.5757804

Manna R; Louie RHY; Li Y; Vucetic B, 2010, 'Cooperative amplify-and-forward relaying in cognitive radio networks', in 2010 Proceedings of the 5th International Conference on Cognitive Radio Oriented Wireless Networks and Communications, CROWNCom 2010, http://dx.doi.org/10.4108/ICST.CROWNCOM2010.9260

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