By Dr Richard Edwards

Preprints

Tobias PA; Downs J; Martino AM; Edwards RJ, 2025, A phased chromosome-level genome resource for a myrtle rust susceptibleSyzygium luehmannii, http://dx.doi.org/10.1101/2025.05.12.653576

Chen SH; Yap J-YS; Viler V; Stehn C; Sandhu KS; Percival J; Pegg GS; Menzies T; Jones A; Guo K; Giblin FR; Cohen J; Edwards RJ; Rossetto M; Bragg JG, 2024, Genomics and resistance assays inform the management of two tree species being devastated by the invasive myrtle rust pathogen, http://dx.doi.org/10.1101/2024.10.30.612564

Hanrahan BJ; Alreja K; Reis ALM; Chang JK; Dissanayake DSB; Edwards RJ; Bertozzi T; Hammond JM; O’Meally D; Deveson IW; Georges A; Waters P; Patel HR, 2024, A genome assembly and annotation for the Australian alpine skinkBassiana duperreyiusing long-read technologies, http://dx.doi.org/10.1101/2024.09.05.611471

Tobias P; Downs J; Epaina P; Singh G; Park R; Edwards R; Brugman E; Zulkifli A; Muhammad J; Purwantara A; Guest D, 2024, Parental assigned chromosomes for cultivated cacao provides insights into genetic architecture underlying resistance to vascular streak dieback, http://dx.doi.org/10.1101/2024.05.26.595985

Cheung K; Rollins LA; Hammond JM; Barton K; Ferguson JM; Eyck HJF; Shine R; Edwards RJ, 2024, Repeat-rich regions cause false positive detection of NUMTs: a case study in amphibians using an improved cane toad reference genome, http://dx.doi.org/10.1101/2024.07.04.601973

Chen S; Jones A; Lu-Irving P; Yap J-Y; van der Merwe M; Bragg J; Edwards R, 2024, Small but mitey: long-read assembly of a streamlined mite genome from contaminated host plant sequencing data, http://dx.doi.org/10.1101/2024.05.17.594625

Ballard JWO; Field MA; Edwards RJ; Wilson LAB; Koungoulos LG; Rosen BD; Chernoff B; Dudchenko O; Omer A; Keilwagen J; Skvortsova K; Bogdanovic O; Chan E; Zammit R; Hayes V; Aiden EL, 2023, The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology., http://dx.doi.org/10.1101/2023.01.26.525801

Chen S; Martino A; Luo Z; Schwessinger B; Jones A; Tolessa T; Bragg J; Tobias P; Edwards R, 2023, A high-quality pseudo-phased genome forMelaleuca quinquenerviashows allelic diversity of NLR-type resistance genes, http://dx.doi.org/10.1101/2023.04.27.538497

Hogg C; Edwards R; Farquharson K; Silver L; Brandies P; Peel E; Escalona M; Jaya F; Sun R; Batley K; Bradford T; Chang K; Chen Z; Deshpande N; Dziminski M; Ewart K; Griffith O; Marin-Gual L; Moon K; Travouillon K; Waters P; Whittington C; Wilkins M; Helgen K; Lo N; Ho S; Ruiz-Herrera A; Paltridge R; Graves J; Renfree M; Shapiro B; Ottewell K; Rangers KC; Belov K, 2023, Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial, http://dx.doi.org/10.21203/rs.3.rs-3723914/v1

Eyck HJF; Edwards R; Brown G; Shine R; Rollins L, 2023, First in family Rhabdiasidae: the reference-guided genome assembly of an invasive parasite, the cane toad lungworm (Rhabdias pseudosphaerocephala), http://dx.doi.org/10.1101/2023.02.28.530339

Yagound B; Sarma R; Edwards R; Richardson M; Lopez CR; Crossland M; Brown G; DeVore J; Shine R; Rollins L, 2023, Is developmental plasticity triggered by DNA methylation changes in the invasive cane toad (Rhinella marina)?, http://dx.doi.org/10.1101/2023.10.26.564158

Cheung K; Amos TG; Shine R; DeVore JL; DeVore JL; Ducatez S; Edwards RJ; Rollins LA, 2023, Mitochondrial genome analyses uncover intriguing population structure across the invasive trajectory of an iconic invader, http://dx.doi.org/10.1101/2023.09.17.558141

Tobias P; Edwards R; Surana P; Mangelson H; Inácio V; do Céu Silva M; Várzea V; Park R; Batista D, 2022, A chromosome-level genome resource for studying virulence mechanisms and evolution of the coffee rust pathogen Hemileia vastatrix, http://dx.doi.org/10.1101/2022.07.29.502101

Edwards R; Dong C; Park R; Tobias P, 2022, A phased chromosome-level genome and full mitochondrial sequence for the dikaryotic myrtle rust pathogen, Austropuccinia psidii, http://dx.doi.org/10.1101/2022.04.22.489119

Stuart K; Edwards R; Sherwin W; Rollins L, 2022, Contrasting patterns of single nucleotide polymorphisms and structural variations across multiple invasions, http://dx.doi.org/10.1101/2022.07.04.498653

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