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Select Publications
Journal articles
, 2010, 'Effects of polymerase, template dilution and cycle number on PCR based 16 S rRNA diversity analysis using the deep sequencing method', BMC Microbiology, 10, http://dx.doi.org/10.1186/1471-2180-10-255
Conference Abstracts
, 2026, 'The effect of anthocyanins through diet and supplementation on cognitive function in older adults: the purple foods randomised controlled clinical trial', in Proceedings of The Nutrition Society, Cambridge University Press (CUP), Vol. 85, pp. e70, http://dx.doi.org/10.1017/s0029665126103103
, 2024, 'Multiomic modelling of antibiotic perturbed faecal microbial communities demonstrates reduced microbial resilience in inflammatory bowel disease', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, Vol. 39, pp. 148 - 149
Software / Code
, 2016, ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database, Github, https://github.com/biofuture/Ublastx_stageone, OpenSource, Published: 17 August 2016, Software / Code
Preprints
, AQMM: Enabling Absolute Quantification of Metagenome and Metatranscriptome, http://dx.doi.org/10.1101/218347
, DEFB119 stratifies dysbiosis with distorted networks in the seminal microbiome associated with male infertility, http://dx.doi.org/10.21203/rs.3.rs-2716767/v1
, Disease-associated gut microbiome and metabolome changes in chronic low back pain patients with bone marrow lesions, http://dx.doi.org/10.1101/2023.07.26.550629