By Jonathan Franco Berengut

Journal articles

Berengut JF; Berg WR; Rizzuto FJ; Lee LK, 2024, 'Passivating Blunt-Ended Helices to Control Monodispersity and Multi-Subunit Assembly of DNA Origami Structures', Small Structures, 5, http://dx.doi.org/10.1002/sstr.202300441

Yang Y; Ma Y; Berengut JF; Lee LK; Tilley RD; Gaus K; Gooding JJ, 2024, 'Electrochemically controlled blinking of fluorophores for quantitative STORM imaging', Nature Photonics, pp. 1 - 8, http://dx.doi.org/10.1038/s41566-024-01431-0

Berengut JF; Berg WR; Rizzuto FJ; Lee LK, 2024, 'Passivating Blunt‐Ended Helices to Control Monodispersity and Multi‐Subunit Assembly of DNA Origami Structures', Small Structures, 5, http://dx.doi.org/10.1002/sstr.202470015

Berg WR; Berengut JF; Bai C; Wimberger L; Lee LK; Rizzuto FJ, 2023, 'Light-Activated Assembly of DNA Origami into Dissipative Fibrils', Angewandte Chemie - International Edition, 62, http://dx.doi.org/10.1002/anie.202314458

Berg WR; Berengut JF; Bai C; Wimberger L; Lee LK; Rizzuto FJ, 2023, 'Light‐Activated Assembly of DNA Origami into Dissipative Fibrils', Angewandte Chemie, 135, http://dx.doi.org/10.1002/ange.202314458

Hendrikse SIS; Todorova N; Soleimaninejad H; Charchar P; Sani MA; Al Taief K; Berengut JF; Wickham SFJ; Gras SL; Fahrenbach AC; Thordarson P; Ellis AV, 2023, 'Exploring Artificial Nucleic Acid Mimicking Peptide Nanofibers', Chemistry of Materials, 35, pp. 4355 - 4365, http://dx.doi.org/10.1021/acs.chemmater.3c00445

Wintersinger CM; Minev D; Ershova A; Sasaki HM; Gowri G; Berengut JF; Corea-Dilbert FE; Yin P; Shih WM, 2023, 'Multi-micron crisscross structures grown from DNA-origami slats', Nature Nanotechnology, 18, pp. 281 - 289, http://dx.doi.org/10.1038/s41565-022-01283-1

Wintersinger CM; Minev D; Ershova A; Sasaki HM; Gowri G; Berengut JF; Corea-Dilbert FE; Yin P; Shih WM, 2023, 'Author Correction: Multi-micron crisscross structures grown from DNA-origami slats (Nature Nanotechnology, (2023), 18, 3, (281-289), 10.1038/s41565-022-01283-1)', Nature Nanotechnology, http://dx.doi.org/10.1038/s41565-023-01365-8

Montgomery K; Williams TJ; Brettle M; Berengut JF; Zhang E; Zaugg J; Hugenholtz P; Ferrari BC, 2022, 'Corrigendum to: Persistence and resistance: survival mechanisms of Candidatus Dormibacterota from nutrient-poor Antarctic soils (Environmental Microbiology, (2021), 23, 8, (4276-4294), 10.1111/1462-2920.15610)', Environmental Microbiology, 24, pp. 4491 - 4491, http://dx.doi.org/10.1111/1462-2920.16191

Brown JWP; Alford RG; Walsh JC; Spinney RE; Xu SY; Hertel S; Berengut JF; Spenkelink LM; Van Oijen AM; Böcking T; Morris RG; Lee LK, 2022, 'Rapid Exchange of Stably Bound Protein and DNA Cargo on a DNA Origami Receptor', ACS Nano, 16, pp. 6455 - 6467, http://dx.doi.org/10.1021/acsnano.2c00699

Singh JKD; Luu MT; Berengut JF; Abbas A; Baker MAB; Wickham SFJ, 2021, 'Minimizing cholesterol-induced aggregation of membrane-interacting dna origami nanostructures', Membranes, 11, http://dx.doi.org/10.3390/membranes11120950

Williams TJ; Allen MA; Berengut JF; Cavicchioli R, 2021, 'Shedding Light on Microbial “Dark Matter”: Insights Into Novel Cloacimonadota and Omnitrophota From an Antarctic Lake', Frontiers in Microbiology, 12, http://dx.doi.org/10.3389/fmicb.2021.741077

Ji M; Williams TJ; Montgomery K; Wong HL; Zaugg J; Berengut JF; Bissett A; Chuvochina M; Hugenholtz P; Ferrari BC, 2021, 'Candidatus Eremiobacterota, a metabolically and phylogenetically diverse terrestrial phylum with acid-tolerant adaptations', ISME Journal, 15, pp. 2692 - 2707, http://dx.doi.org/10.1038/s41396-021-00944-8

Montgomery K; Williams TJ; Brettle M; Berengut JF; Angelique E; Zhang E; Zaugg J; Hugenholtz P; Ferrari BC; Ray A, 2021, 'Persistence and resistance: survival mechanisms of Candidatus Dormibacterota from nutrient-poor Antarctic soils', Environmental Microbiology, 23, pp. 4276 - 4294, http://dx.doi.org/10.1111/1462-2920.15610

Berengut JF; Wong CK; Berengut JC; Doye JPK; Ouldridge TE; Lee LK, 2020, 'Self-Limiting Polymerization of DNA Origami Subunits with Strain Accumulation', ACS Nano, 14, pp. 17428 - 17441, http://dx.doi.org/10.1021/acsnano.0c07696

Berengut JF; Berengut JC; Doye JPK; Prešern D; Kawamoto A; Ruan J; Wainwright MJ; Lee LK, 2019, 'Design and synthesis of pleated DNA origami nanotubes with adjustable diameters', Nucleic Acids Research, 47, pp. 11963 - 11975, http://dx.doi.org/10.1093/nar/gkz1056

Baker MAB; Nieves DJ; Hilzenrat G; Berengut JF; Gaus K; Lee LK, 2019, 'Stoichiometric quantification of spatially dense assemblies with qPAINT', Nanoscale, 11, pp. 12460 - 12464, http://dx.doi.org/10.1039/c9nr00472f

Baker M; Nieves D; Hilzenrat G; Berengut J; Gaus K; Lee L, 2019, 'Stoichiometric quantification of spatially dense assemblies with qPAINT', , http://dx.doi.org/10.1101/525345

Baker MAB; Tuckwell AJ; Berengut JF; Bath J; Benn F; Duff AP; Whitten AE; Dunn KE; Hynson RM; Turberfield AJ; Lee LK, 2018, 'Dimensions and Global Twist of Single-Layer DNA Origami Measured by Small-Angle X-ray Scattering', ACS Nano, 12, pp. 5791 - 5799, http://dx.doi.org/10.1021/acsnano.8b01669

Milligan MJ; Harvey E; Yu A; Morgan AL; Smith DL; Zhang E; Berengut J; Sivananthan J; Subramaniam R; Skoric A; Collins S; Damski C; Morris KV; Lipovich L, 2016, 'Global intersection of long non-coding RNAs with processed and unprocessed pseudogenes in the human genome', Frontiers in Genetics, 7, http://dx.doi.org/10.3389/fgene.2016.00026

Conference Papers

Baker MA; Tuckwell AJ; Berengut JF; Bath J; Benn F; Duff AP; Whitten AE; Dunn KE; Hynson RM; Turberfield AJ; Lee LK, 2017, 'DNA origami dimensions and structure measured by solution X-ray scattering', in EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, SPRINGER, SCOTLAND, British Biophys Soc, Edinburgh, pp. S137 - S137, presented at 19th IUPAB Congress / 11th EBSA Congress, SCOTLAND, British Biophys Soc, Edinburgh, 16 July 2017 - 20 July 2017, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000416406200296&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Preprints

Luu MT; Berengut JF; Daljit Singh JK; Coffi Dit Glieze K; Turner M; Skipper K; Meppat S; Fowler H; Close W; Doye JPK; Abbas A; Wickham SFJ, 2024, Reconfigurable multi-component nanostructures built from DNA origami voxels, , http://dx.doi.org/10.1101/2024.03.10.584331

Berengut JF; Berg WR; Rizzuto FJ; Lee LK, 2023, Passivating blunt-ended helices to control monodispersity and multi-subunit assembly of DNA origami structures, , http://dx.doi.org/10.1101/2023.09.09.557003

Wintersinger CM; Minev D; Ershova A; Sasaki HM; Gowri G; Berengut JF; Corea-Dilbert FE; Yin P; Shih WM, 2022, Multi-micron crisscross structures from combinatorially assembled DNA-origami slats, , http://dx.doi.org/10.1101/2022.01.06.475243

Brown JWP; Alford R; Walsh J; Spinney R; Xu S; Hertel S; Berengut J; Spenkelink L; van Oijen A; Böcking T; Morris R; Lee L, 2022, Rapid exchange of stably bound protein and DNA cargo on a DNA origami receptor, , http://dx.doi.org/10.1101/2022.01.16.476526

Berengut JF; Ruan J; Kawamoto A; Lee LK, 2019, Design and Synthesis of Pleated DNA Origami Nanotubes with Adjustable Diameters, , http://dx.doi.org/10.1101/534792

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