Select Publications
Book Chapters
, 2023, 'Low Carbon Water Treatment and Energy Recovery', in Zhao X; Dong L; Wang Z (ed.), , MDPI, http://dx.doi.org/10.3390/books978-3-0365-9267-1
Journal articles
2024, 'Increasing the accuracy and reproducibility of positron emission tomography radiomics for predicting pelvic lymph node metastasis in patients with cervical cancer using 3D local binary pattern-based texture features', Intelligent Medicine, 4, pp. 153 - 160, http://dx.doi.org/10.1016/j.imed.2024.03.001
,2024, 'Deep learning methods for noisy sperm image classification from convolutional neural network to visual transformer: a comprehensive comparative study', Intelligent Medicine, 4, pp. 114 - 127, http://dx.doi.org/10.1016/j.imed.2023.04.001
,2024, 'What can machine vision do for lymphatic histopathology image analysis: a comprehensive review', Artificial Intelligence Review, 57, http://dx.doi.org/10.1007/s10462-024-10701-w
,2024, 'Few-shot learning based histopathological image classification of colorectal cancer', Intelligent Medicine, http://dx.doi.org/10.1016/j.imed.2024.05.003
,2024, 'Generalized deep learning for histopathology image classification using supervised contrastive learning', Journal of Advanced Research, http://dx.doi.org/10.1016/j.jare.2024.11.013
,2023, 'Breast cancer histopathology image-based gene expression prediction using spatial transcriptomics data and deep learning', Scientific Reports, 13, pp. 13604, http://dx.doi.org/10.1038/s41598-023-40219-0
,2023, 'EBHI: A new Enteroscope Biopsy Histopathological H&E Image Dataset for image classification evaluation', Physica Medica, 107, http://dx.doi.org/10.1016/j.ejmp.2023.102534
,2023, 'A state-of-the-art survey of object detection techniques in microorganism image analysis: from classical methods to deep learning approaches', Artificial Intelligence Review, 56, pp. 1627 - 1698, http://dx.doi.org/10.1007/s10462-022-10209-1
,2023, 'A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements', Archives of Computational Methods in Engineering, 30, pp. 639 - 673, http://dx.doi.org/10.1007/s11831-022-09811-x
,2023, 'Segmentation of weakly visible environmental microorganism images using pair-wise deep learning features', Biomedical Signal Processing and Control, 79, http://dx.doi.org/10.1016/j.bspc.2022.104168
,2022, 'CVM-Cervix: A hybrid cervical Pap-smear image classification framework using CNN, visual transformer and multilayer perceptron', Pattern Recognition, 130, http://dx.doi.org/10.1016/j.patcog.2022.108829
,2022, 'GasHis-Transformer: A multi-scale visual transformer approach for gastric histopathological image detection', Pattern Recognition, 130, http://dx.doi.org/10.1016/j.patcog.2022.108827
,2022, 'A comprehensive review of computer-aided whole-slide image analysis: from datasets to feature extraction, segmentation, classification and detection approaches', Artificial Intelligence Review, 55, pp. 4809 - 4878, http://dx.doi.org/10.1007/s10462-021-10121-0
,2022, 'A hierarchical conditional random field-based attention mechanism approach for gastric histopathology image classification', Applied Intelligence, 52, pp. 9717 - 9738, http://dx.doi.org/10.1007/s10489-021-02886-2
,2022, 'An Application of Pixel Interval Down-Sampling (PID) for Dense Tiny Microorganism Counting on Environmental Microorganism Images', Applied Sciences (Switzerland), 12, http://dx.doi.org/10.3390/app12147314
,2022, 'EMDS-6: Environmental Microorganism Image Dataset Sixth Version for Image Denoising, Segmentation, Feature Extraction, Classification, and Detection Method Evaluation', Frontiers in Microbiology, 13, http://dx.doi.org/10.3389/fmicb.2022.829027
,2022, 'A comprehensive review of image analysis methods for microorganism counting: from classical image processing to deep learning approaches', Artificial Intelligence Review, 55, pp. 2875 - 2944, http://dx.doi.org/10.1007/s10462-021-10082-4
,2022, 'IL-MCAM: An interactive learning and multi-channel attention mechanism-based weakly supervised colorectal histopathology image classification approach', Computers in Biology and Medicine, 143, http://dx.doi.org/10.1016/j.compbiomed.2022.105265
,2022, 'A Comparative Study of Deep Learning Classification Methods on a Small Environmental Microorganism Image Dataset (EMDS-6): From Convolutional Neural Networks to Visual Transformers', Frontiers in Microbiology, 13, http://dx.doi.org/10.3389/fmicb.2022.792166
,2022, 'GasHisSDB: A new gastric histopathology image dataset for computer aided diagnosis of gastric cancer', Computers in Biology and Medicine, 142, http://dx.doi.org/10.1016/j.compbiomed.2021.105207
,2022, 'Is the aspect ratio of cells important in deep learning? A robust comparison of deep learning methods for multi-scale cytopathology cell image classification: From convolutional neural networks to visual transformers', Computers in Biology and Medicine, 141, http://dx.doi.org/10.1016/j.compbiomed.2021.105026
,2022, 'A Comprehensive Review of Markov Random Field and Conditional Random Field Approaches in Pathology Image Analysis', Archives of Computational Methods in Engineering, 29, pp. 609 - 639, http://dx.doi.org/10.1007/s11831-021-09591-w
,2022, 'SVIA dataset: A new dataset of microscopic videos and images for computer-aided sperm analysis', Biocybernetics and Biomedical Engineering, 42, pp. 204 - 214, http://dx.doi.org/10.1016/j.bbe.2021.12.010
,2021, 'DeepCervix: A deep learning-based framework for the classification of cervical cells using hybrid deep feature fusion techniques', Computers in Biology and Medicine, 136, http://dx.doi.org/10.1016/j.compbiomed.2021.104649
,2021, 'EMDS-5: Environmental Microorganism image dataset Fifth Version for multiple image analysis tasks', PLoS ONE, 16, http://dx.doi.org/10.1371/journal.pone.0250631
,2021, 'A State-of-the-Art Review for Gastric Histopathology Image Analysis Approaches and Future Development', BioMed Research International, 2021, http://dx.doi.org/10.1155/2021/6671417
,2020, 'Gastric histopathology image segmentation using a hierarchical conditional random field', Biocybernetics and Biomedical Engineering, 40, pp. 1535 - 1555, http://dx.doi.org/10.1016/j.bbe.2020.09.008
,2020, 'A Comprehensive Review for Breast Histopathology Image Analysis Using Classical and Deep Neural Networks', IEEE Access, 8, pp. 90931 - 90956, http://dx.doi.org/10.1109/ACCESS.2020.2993788
,2020, 'A survey for cervical cytopathology image analysis using deep learning', IEEE Access, 8, pp. 61687 - 61710, http://dx.doi.org/10.1109/ACCESS.2020.2983186
,2020, 'An Application of Transfer Learning and Ensemble Learning Techniques for Cervical Histopathology Image Classification', IEEE Access, 8, pp. 104603 - 104618, http://dx.doi.org/10.1109/ACCESS.2020.2999816
,2020, 'An enhanced framework of generative adversarial networks (EF-GANs) for environmental microorganism image augmentation with limited rotationinvariant training data', IEEE Access, 8, pp. 187455 - 187469, http://dx.doi.org/10.1109/ACCESS.2020.3031059
,2020, 'Foldover Features for Dynamic Object Behaviour Description in Microscopic Videos', IEEE Access, 8, pp. 114519 - 114540, http://dx.doi.org/10.1109/ACCESS.2020.3003993
,2020, 'Identification of COVID-19 samples from chest X-Ray images using deep learning: A comparison of transfer learning approaches', Journal of X-Ray Science and Technology, 28, pp. 821 - 839, http://dx.doi.org/10.3233/XST-200715
,Conference Papers
2024, 'Histopathology Image Classification Using Supervised Contrastive Deep Learning', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635260
,2023, 'TOD-Net: Transformer-Based Neural Network for Tiny Object Detection in Sperm Microscopic Videos', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI53787.2023.10230550
,2021, 'Intelligent Gastric Histopathology Image Classification Using Hierarchical Conditional Random Field based Attention Mechanism', in ACM International Conference Proceeding Series, pp. 330 - 335, http://dx.doi.org/10.1145/3457682.3457733
,2018, 'CZTS based thin film solar cell: An investigation into the influence of dark current on cell performance', in 2018 Joint 7th International Conference on Informatics, Electronics and Vision and 2nd International Conference on Imaging, Vision and Pattern Recognition, ICIEV-IVPR 2018, pp. 87 - 92, http://dx.doi.org/10.1109/ICIEV.2018.8641013
,Preprints
2023, Breast cancer histopathology image-based gene expression prediction using spatial transcriptomics data and deep learning, http://dx.doi.org/10.21203/rs.3.rs-2983276/v1
,2023, Breast Cancer Histopathology Image based Gene Expression Prediction using Spatial Transcriptomics data and Deep Learning, http://dx.doi.org/10.1038/s41598-023-40219-0
,2023, ACTIVE: A Deep Model for Sperm and Impurity Detection in Microscopic Videos, http://dx.doi.org/10.48550/arxiv.2301.06002
,2022, Segmentation of Weakly Visible Environmental Microorganism Images Using Pair-wise Deep Learning Features, http://dx.doi.org/10.48550/arxiv.2208.14957
,2022, IL-MCAM: An interactive learning and multi-channel attention mechanism-based weakly supervised colorectal histopathology image classification approach, http://dx.doi.org/10.48550/arxiv.2206.03368
,2022, CVM-Cervix: A Hybrid Cervical Pap-Smear Image Classification Framework Using CNN, Visual Transformer and Multilayer Perceptron, http://dx.doi.org/10.48550/arxiv.2206.00971
,2022, An application of Pixel Interval Down-sampling (PID) for dense tiny microorganism counting on environmental microorganism images, http://dx.doi.org/10.48550/arxiv.2204.01341
,2022, A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements, http://dx.doi.org/10.48550/arxiv.2202.09020
,2022, EBHI:A New Enteroscope Biopsy Histopathological H&E Image Dataset for Image Classification Evaluation, http://dx.doi.org/10.48550/arxiv.2202.08552
,2022, What Can Machine Vision Do for Lymphatic Histopathology Image Analysis: A Comprehensive Review, http://dx.doi.org/10.48550/arxiv.2201.08550
,2021, EMDS-6: Environmental Microorganism Image Dataset Sixth Version for Image Denoising, Segmentation, Feature Extraction, Classification and Detection Methods Evaluation, http://dx.doi.org/10.48550/arxiv.2112.07111
,2021, A Comparative Study of Deep Learning Classification Methods on a Small Environmental Microorganism Image Dataset (EMDS-6): from Convolutional Neural Networks to Visual Transformers, http://dx.doi.org/10.48550/arxiv.2107.07699
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