Select Publications

Journal articles

Sivaramakrishnan H; Reilly M; Jaffe A; Baynam G; Helwani F; McKenzie A; Finlay-Jones A, 2026, 'Australia’s top 10 rare disease research priorities: a priority setting partnership', Journal of Rare Diseases Germany, 5, http://dx.doi.org/10.1007/s44162-026-00146-w

Orya S; Khan JR; Prentice B; Owens L; Britton P; Jaffe A; Homaira N; Chan M, 2026, 'Epidemiology and clinical outcomes of influenza in hospitalised children ≤ 17 years before and after COVID-19 pandemic in a tertiary paediatric network in Sydney, Australia', Discover Public Health, 23, http://dx.doi.org/10.1186/s12982-026-02483-z

Chanie ES; Jaffe A; Khan JR; Homaira N, 2026, 'Prevalence and risk factors for asthma in East Africa: a systematic review and meta-analysis', BMC Pediatrics, 26, http://dx.doi.org/10.1186/s12887-026-06550-x

Selvadurai Y; Kennedy B; Mcbride J; Field P; Jeyaratnam B; Karpelowsky J; Robinson P; Fitzgerald DA; Solomon M; Bush A; Jaffe A; Selvadurai H, 2026, 'Long-term cardiopulmonary function in children treated for empyema: comparison of chest drain with fibrinolytics and video-assisted thoracoscopic surgery', BMJ Open Respiratory Research, 13, http://dx.doi.org/10.1136/bmjresp-2026-004306

McGraw MD; DeBoer E; Weinman JP; Deutsch GH; Pogoriler J; Parenti MB; Kurland G; Blatter J; Casey AM; Deterding RR; Fiorino EK; Young LR; Barnes H; Balasubramaniam V; Brennan SK; Charoenpong P; Craven D; Dell S; Epaud R; Fishman MP; Gettys A; Goldfarb S; Gower WA; Ha DM; Hagood JS; Hamvas A; Jaffe A; Kennedy JC; Krivchenia K; Liptzin DR; Nathan N; Nevel RJ; Ocasio-Ramirez V; Pryhuber G; Raby BA; Sadreameli SC; Teper A; Vargas SO; Vece TJ; Iyer NP; Nogee LM; Wambach JA; American Thoracic Society Assembly on Pediatrics , 2026, 'An Update to the Classification, Evaluation, and Management of Childhood Interstitial Lung Disease in Infancy: An Official American Thoracic Society Clinical Practice Guideline.', Am J Respir Crit Care Med, http://dx.doi.org/10.1093/ajrccm/aamag375

Wan S; Schearer MC; Oliver AG; Jaffe A, 2026, 'Long-Lived Photochromism in a Crystalline Hybrid Naphthalenediimide–Polyoxovanadate System', Inorganic Chemistry, 65, pp. 14426 - 14430, http://dx.doi.org/10.1021/acs.inorgchem.6c02353

Hii AWW; Khan JR; Paul KK; Chan M; Hu N; McMullan B; Britton PN; Bartlett AW; Kandasamy R; Owens L; Prentice B; Jaffe A; Homaira N, 2026, 'In-Hospital Complications of Influenza A and B Among Hospitalized Australian Children in the Post-COVID Era', Clinical Respiratory Journal, 20, http://dx.doi.org/10.1111/crj.70217

Sabino LR; Kaiko GE; Dorahy D; Goodsall T; Jaffe A; Schultz A; Waters S; Cook D; Kok H; Tong K; Totterdell J; McGree J; Snelling T; Wark PAB, 2026, 'ORIGIN-1 trial: study protocol for an organoid-guided N-of-1 trial evaluating CFTR modulator response in cystic fibrosis with rare non-F508del mutations.', Trials, http://dx.doi.org/10.1186/s13063-026-09789-y

Fawcett LK; Chew ZA; Schneider-Futschik EK; Allan KM; Patel HR; Jaffe A; Waters S, 2026, 'Predictive capacity of paediatric nasal epithelial cells in sequential CFTR modulator therapy', Thorax, 81, pp. 548 - 559, http://dx.doi.org/10.1136/thorax-2025-223153

Williams PCM; Jones AH; Duguid R; Phuong LK; Gwee A; Johnston N; Butters C; Oftadeh S; Chen S; Koirala A; Homaira N; Kandasamy R; Bartlett AW; Jaffe A; McMullan B; Palasanthiran P; Wijeratne P; Britton P; Fathima P; Snelling TN; Sintchenko V; Jayasinghe S, 2026, 'The Evolving Epidemiology of Invasive Pneumococcal Disease in Australian Children: A Multicentre Retrospective Observational Study', Open Forum Infectious Diseases, 13, http://dx.doi.org/10.1093/ofid/ofag275

Frohlich M; Hillenbrand C; Burke S; Morgan L; Jaffé A, 2026, 'Phase-resolved functional lung (PREFUL) MRI provides unique insight into response to bilobectomy in a child with primary ciliary dyskinesia', Thorax, 81, pp. 497 - 498, http://dx.doi.org/10.1136/thorax-2025-223653

Islam MA; Chan M; Khan JR; Hu N; McMullan B; Britton PN; Bartlett AW; Kandasamy R; Prentice B; Jaffe A; Homaira N, 2026, 'Human Metapneumovirus-associated Acute Lower Respiratory Hospitalizations in Children <5 Years Pre-, During and Post-COVID-19 Pandemic: A Multicenter Study', Pediatric Infectious Disease Journal, Publish Ahead of Print, http://dx.doi.org/10.1097/INF.0000000000005138

Fathima P; Pan E; Marsh J; Shanthikumar S; Sivam S; Jaffe A; Selvadurai H; Khatami A; Jayasuriya G; Norman R; Tai A; Burr L; Mulrennan S; Snelling T; Schultz A, 2026, 'Characteristics, treatment and lung function outcomes of pulmonary exacerbations in cystic fibrosis: insights from the BEAT-CF cohort', European Respiratory Journal, 67, http://dx.doi.org/10.1183/13993003.01349-2025

Schearer MC; Sosulin IS; Dayaratne WLN; Lisouskaya A; Jaffe A, 2026, 'Dimensionality-driven optical and electronic evolution of naphthalenediimide-templated hybrid metal oxides', Chemical Science, http://dx.doi.org/10.1039/d6sc03893j

Kabir A; Islam MA; Joypaul S; Gide D; Arnolda G; Zurynski Y; Fisher G; Kelly C; Mullins Y; Gould B; Flynn A; Burke S; Chua AV; Dealhoy C; Rojas C; Braithwaite J; Jaffe A; Homaira N, 2026, 'Integrating evidence-based paediatric asthma management in Australian primary care: phase I protocol for developing implementation bundles', Frontiers in Health Services, 6, http://dx.doi.org/10.3389/frhs.2026.1723215

de Groot A; Mackle R; Gray M; Chan M; Hodgins M; Hu N; Angell B; Campbell N; Owens L; Fletcher J; McCrossin T; Piper S; Du H; Haggie S; Doyle AK; Woolfenden S; Gould B; Ward F; Jaffe A; Homaira N; Lingam R; Crespo-Gonzalez C, 2026, 'Understanding how personalized pediatric asthma information and support addresses rural families’ unmet needs', Journal of Rural Health, 42, http://dx.doi.org/10.1111/jrh.70125

Hudson J; Taylor N; Coffey MJ; Pushpakumara BU; Prentice B; Jaffe A; Visser S; Sivam S; Day AS; Oliver M; Ranganathan S; Selvadurai H; Wainwright C; Ooi CY; van Dorst J, 2026, 'Evaluating the role of the gut as a reservoir for non-tuberculous mycobacteria in people with cystic fibrosis', Journal of Cystic Fibrosis, 25, pp. S94 - S94, http://dx.doi.org/10.1016/s1569-1993(26)00419-4

Coffey MJ; van Dorst J; Pushpakumara BU; Hudson J; Halim J; Day AS; Oliver M; Ranganathan S; Wainwright C; Selvadurai H; Thomas T; Jaffe A; Ooi CY, 2026, 'Proton pump inhibitor exposure and gut microbiome development in early childhood cystic fibrosis: insights from the PEARL-CF Study', Journal of Cystic Fibrosis, 25, pp. S51 - S51, http://dx.doi.org/10.1016/s1569-1993(26)00291-2

Pushpakumara BU; van Dorst J; Coffey MJ; Hudson J; Halim J; Chuang S; Prentice B; Jaffe A; Edwards R; Day AS; Oliver M; Ranganathan S; Wainwright C; Selvadurai H; Ooi CY, 2026, 'Quantifying CF gut dysbiosis: a reproducible and treatmentresponsive microbiome index', Journal of Cystic Fibrosis, 25, pp. S17 - S17, http://dx.doi.org/10.1016/s1569-1993(26)00184-0

Rashid MM; Hu N; Chan M; khan JR; Jaffe A; Homaira N, 2025, 'Risk Factors for Asthma Readmission Among Australian Children- A Population-Based Cohort Study', Pediatric Pulmonology, 60, http://dx.doi.org/10.1002/ppul.71433

Braithwaite J; Fisher G; Harrison R; Mumford V; Davis EA; de Wet C; Homaira N; Mitchell R; Jaffe A; Willcock S; McMullan B; Arnolda G; Zurynski Y; Woodhead H; Goodger B; White L; Elias L; Vir S; Durrington L; Smith M; Fraser L; Swann J; Flynn A; Massis C; Benson I; Vickery T; Corbett H; Rojas C; Hibbert P, 2025, 'The National Paediatric Applied Research Translation Initiative (N-PARTI): using implementation science to improve primary care for Australian children with asthma, type 1 diabetes, and infections', BMC Health Services Research, 25, http://dx.doi.org/10.1186/s12913-025-12491-5

Torres-Cadena R; Dayaratne WLN; Lee M; Jaffe A, 2025, 'Pressure-induced coupling of hydrated 4,4′-bipyridine', Physical Chemistry Chemical Physics, 27, pp. 23545 - 23549, http://dx.doi.org/10.1039/d5cp03862f

Anderson GP; Flynn A; Bardin PG; Blakey JD; Dharmage SC; Foster P; Gibson PG; Jaffe A; James A; Jenkins CR; Sivamalai S; Sly PD; Marks GB; McDonald VM; Wetttenhall J, 2025, 'The CURE Asthma roadmap', Medical Journal of Australia, 223, pp. S9 - S15, http://dx.doi.org/10.5694/mja2.70094

Mackle R; Crespo-Gonzalez C; Gray M; Chan M; Hodgins M; Hu N; Angell B; Campbell N; Owens L; Fletcher J; McCrossin T; Piper S; Du H; Haggie S; Doyle AK; Woolfenden S; Gould B; Ward F; Lingam R; Homaira N; Jaffé A, 2025, 'Implementing enhanced paediatric asthma care in rural Australia: Qualitative insights from healthcare professionals', Respiratory Medicine, 249, http://dx.doi.org/10.1016/j.rmed.2025.108444

Robertson GM; Jaffe A, 2025, 'Structural and electronic tuning of hybrid metal thiocyanate N-oxides', Dalton Transactions, 54, pp. 14648 - 14653, http://dx.doi.org/10.1039/d5dt02188j

Padilla AE; Jaffe A, 2025, 'Anion exchange in bismuth oxyhalides for electronic property control and isolation of BiON3', Inorganic Chemistry Frontiers, 12, pp. 8470 - 8478, http://dx.doi.org/10.1039/d5qi01602a

Robertson EG; Kelada L; Ilin R; Palmer EE; Bye A; Jaffe A; Kennedy SE; Ooi CY; Drew D; Wakefield CE, 2025, 'Psychological wellbeing among parents of a child living with a serious chronic illness: A cross-sectional survey study', Journal of Child Health Care, 29, pp. 626 - 641, http://dx.doi.org/10.1177/13674935241238485

Råket HK; Milder T; Litchfield M; Jensen CB; Wang JN; Jimenez-Solem E; Petersen J; Pearson SA; Jaffe A; Falster MO, 2025, 'Reduced Use of Maintenance Therapies Among People With Cystic Fibrosis Following Initiation of Elexacaftor/Tezacaftor/Ivacaftor in Australia', Clinical Therapeutics, 47, pp. 813 - 815, http://dx.doi.org/10.1016/j.clinthera.2025.05.016

Homaira N; Khan JR; Jaffé A, 2025, 'Serotype 3 associated invasive pneumococcal disease in children: analysis of 15 years of Australian national surveillance data', Thorax, 80, pp. 662 - 664, http://dx.doi.org/10.1136/thorax-2025-223125

Rashid MM; Hu N; Khan JR; Chan M; Gray M; Owens L; Jaffe A; Homaira N, 2025, 'The High Burden of Asthma Readmission Among Australian Children: A Population-Based Cohort Study', Respirology, 30, pp. 871 - 881, http://dx.doi.org/10.1111/resp.70049

Bhurawala H; Jaffe A, 2025, 'Australasian Bronchiolitis PREDICT Guideline 2025: Evidence-Based Recommendations for Equity and Care Across Diverse Settings', Journal of Paediatrics and Child Health, 61, pp. 1347 - 1348, http://dx.doi.org/10.1111/jpc.70142

Torres-Cadena R; Dayaratne WLN; Chen HT; Kovrigin EL; Tucker MG; Haberl B; Jaffe A, 2025, 'Negative Compressibility Transitions in Hybrid Metal Oxides', Journal of the American Chemical Society, 147, pp. 25931 - 25939, http://dx.doi.org/10.1021/jacs.5c08464

Dayaratne WLN; Torres-Cadena R; Walte AF; Wan S; Morales Campos J; Jaffe A, 2025, 'A Hybrid Bronze Age: Progress and Potential in Mixed-Valence Organic-Inorganic Metal Oxides', Inorganic Chemistry, 64, pp. 12881 - 12899, http://dx.doi.org/10.1021/acs.inorgchem.5c01018

Smith JS; Coffey MJ; Jaffe A; Chuang S; Prentice B; van Dorst J; Ooi CY, 2025, 'Disorders of Gut−Brain Interaction in a Pediatric Cystic Fibrosis Cohort', Pediatric Pulmonology, 60, http://dx.doi.org/10.1002/ppul.71214

Hameed S; Barnes EH; Briody J; Wainwright CE; Hilton J; Field PI; Tai A; Belessis Y; Chan CL; Selvadurai H; Prentice B; Katz T; McMahon SK; Neylan M; Pena A; Jaffe A; Verge CF, 2025, 'Insulin for early glycaemic abnormality in children with cystic fibrosis without cystic fibrosis-related diabetes (CF-IDEA): a randomised controlled trial', Lancet Child and Adolescent Health, 9, pp. 371 - 382, http://dx.doi.org/10.1016/S2352-4642(25)00099-9

Ozturk A; Chan M; Khan JR; Hu N; McMullan B; Britton PN; Bartlett A; Kandasamy R; Saravanos GL; Prentice B; Shi T; Jaffe A; Owens L; Homaira N, 2025, 'Clinical Characteristics and In-hospital Outcomes Associated with Respiratory Syncytial Virus vs Other Viral Acute Lower Respiratory Infections in Hospitalized Children Younger Than 2 Years', Journal of Infectious Diseases, 231, pp. 1309 - 1317, http://dx.doi.org/10.1093/infdis/jiae543

Palmer EE; Recsei K; McKnight L; Roberts N; Baynam G; Zurynski Y; Farrar M; Healy L; Millis N; Jaffe A, 2025, '“You get left behind and lost in a complex world of rare care”: equity in access to rare disease care—learnings from the Australian Rare Disease Awareness, Education, Support, and Training (RArEST) project', Ebiomedicine, 115, http://dx.doi.org/10.1016/j.ebiom.2025.105710

Fathima P; Pan E; Marsh J; Newall N; Meares T; McLeod C; Shanthikumar S; Jaffe A; Tai A; Ward N; Sivam S; Selvadurai H; Schultz A; Snelling T, 2025, 'BEAT-CF (Bayesian Evidence Adaptive Treatment for people with Cystic Fibrosis): description of a prospective cohort for nested studies in cystic fibrosis', Respiratory Medicine, 241, http://dx.doi.org/10.1016/j.rmed.2025.108080

Morales Campos J; Beck WD; Prokop BS; Jaffe A, 2025, 'Iron-Directed Thermolysis of Pyridine-N-Oxide in Layered Metal Cyanides', ACS Materials Letters, 7, pp. 3512 - 3517, http://dx.doi.org/10.1021/acsmaterialslett.5c01040

Chan C; Coffey M; Murphy C; McKay I; Abdu J; Paida K; Tam RY; Wrigley-Carr H; Prentice B; Owens L; Belessis Y; Chuang S; Jaffe A; van Dorst J; Ooi CY, 2025, 'The Prevalence of Polyketide Synthase-Positive E. coli in Cystic Fibrosis', Microorganisms, 13, http://dx.doi.org/10.3390/microorganisms13030681

Fawcett LK; Waters SA; Jaffe A, 2025, 'The equitable challenges to quality use of modulators for cystic fibrosis in Australia', Medical Journal of Australia, 222, pp. 4 - 9, http://dx.doi.org/10.5694/mja2.52527

Jonker AH; Tataru EA; Dimmock DP; Bateman-House A; Graessner H; Baynam G; Augustine EF; Jaffe A; Pasmooij AMG; Iliach O; Horgan R; Davies J; Mitkus S; Lapteva L; Synofzik M; Yu TW; O’Connor D; Aartsma-Rus A, 2025, 'From roadmap to a sustainable end-to-end individualized therapy pathway', Therapeutic Advances in Rare Disease, 6, http://dx.doi.org/10.1177/26330040251339204

Mackle R; Chan M; Lay M; Purcell M; Campbell N; Jaffe A; Owens L; Gray M; Homaira N, 2025, 'Parental perceptions and knowledge toward Asthma Action Plans', Journal of Asthma, 62, pp. 435 - 444, http://dx.doi.org/10.1080/02770903.2024.2408758

Jonker AH; Tataru EA; Graessner H; Dimmock D; Jaffe A; Baynam G; Davies J; Mitkus S; Iliach O; Horgan R; Augustine EF; Bateman-House A; Pasmooij AMG; Yu T; Synofzik M; Douville J; Lapteva L; Brooks PJ; O’Connor D; Aartsma-Rus A, 2025, 'The state-of-the-art of N-of-1 therapies and the IRDiRC N-of-1 development roadmap', Nature Reviews Drug Discovery, 24, pp. 40 - 56, http://dx.doi.org/10.1038/s41573-024-01059-3

Coffey M; van Dorst J; Pushpakumara B; Hudson J; Halim J; Day A; Oliver M; Ranganathan S; Wainwright C; Selvadurai H; Thomas T; Jaffe A; Ooi C, 2025, '121 Probiotics and the EARly Life effects on intestinal bacteria and inflammation in children with cystic fibrosis (PEARL-CF) study', Journal of Cystic Fibrosis, 24, pp. S70 - S71, http://dx.doi.org/10.1016/s1569-1993(25)01740-0

h JSS; van Dorst J; Coffey M; Katz T; Jaffe A; Chuang S; Prentice B; Ooi C, 2025, '587 Disorders of gut brain interaction in a pediatric cystic fibrosis cohort', Journal of Cystic Fibrosis, 24, pp. S345a - S345, http://dx.doi.org/10.1016/s1569-1993(25)02203-9

Coffey MJ; van Dorst J; Pushpakumara BU; Hudson J; Halim J; Day AS; Oliver M; Ranganathan S; Wainwright C; Selvadurai H; Thomas T; Jaffe A; Ooi CY, 2025, 'WS19.06 Probiotics and the EARly Life effects on intestinal bacteria and inflammation in children with Cystic Fibrosis (PEARL-CF) Study', Journal of Cystic Fibrosis, 24, pp. S35 - S36, http://dx.doi.org/10.1016/j.jcf.2025.03.676

Khan JR; Lingam R; Owens L; Chen K; Shanthikumar S; Oo S; Schultz A; Widger J; Bakar KS; Jaffe A; Homaira N, 2024, 'Social deprivation and spatial clustering of childhood asthma in Australia', Global Health Research and Policy, 9, http://dx.doi.org/10.1186/s41256-024-00361-2

Doumit M; Pacey V; Jaffe A; Gray K, 2024, 'Understanding the acceptability of the changing model of care in cystic fibrosis', Respiratory Medicine, 234, http://dx.doi.org/10.1016/j.rmed.2024.107847

McKnight L; Schultz A; Vidic N; Palmer EE; Jaffe A, 2024, 'Learning to make a difference for chILD: Value creation through network collaboration and team science', Pediatric Pulmonology, 59, pp. 2257 - 2266, http://dx.doi.org/10.1002/ppul.26377


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