Select Publications
Journal articles
2016, 'Legacy effects of soil moisture on microbial community structure and N
2016, 'Microbial diversity at Mitchell Peninsula, Eastern Antarctica: a potential biodiversity “hotspot”', Polar Biology, 39, pp. 237 - 249, http://dx.doi.org/10.1007/s00300-015-1776-y
,2016, 'Specific global responses to N and Fe nutrition in toxic and non-toxic Microcystis aeruginosa', Environmental Microbiology, 18, pp. 401 - 413, http://dx.doi.org/10.1111/1462-2920.12958
,2016, 'Introducing BASE: The Biomes of Australian Soil Environments soil microbial diversity database', GigaScience, 5, http://dx.doi.org/10.1186/s13742-016-0126-5
,2015, 'Specific global responses to N and Fe nutrition in toxic and non-toxic Microcystis aeruginosa', Environmental Microbiology, http://dx.doi.org/10.1111/1462-2920.12958
,2014, 'Insights into the distribution and abundance of the ubiquitous candidatus Saccharibacteria phylum following tag pyrosequencing', Scientific Reports, 4, http://dx.doi.org/10.1038/srep03957
,2014, 'Bacterial targets as potential indicators of diesel fuel toxicity in subantarctic soils', Applied and Environmental Microbiology, 80, pp. 4021 - 4033, http://dx.doi.org/10.1128/AEM.03939-13
,2014, 'Community fingerprinting in a sequencing world', FEMS Microbiology Ecology, 89, pp. 316 - 330, http://dx.doi.org/10.1111/1574-6941.12308
,2014, 'Soil fertility is associated with fungal and bacterial richness, whereas pH is associated with community composition in polar soil microbial communities', Soil Biology and Biochemistry, 78, pp. 10 - 20, http://dx.doi.org/10.1016/j.soilbio.2014.07.005
,2014, 'The ecological controls on the prevalence of candidate division TM7 in polar regions', Frontiers in Microbiology, 5, pp. 345, http://dx.doi.org/10.3389/fmicb.2014.00345
,2013, 'Three-color cytometry for the simultaneous detection of the Cryptosporidium species contributing to the majority of human cryptosporidiosis. Journal of Public Health Frontier', Journal of Public Health Frontier, 2, pp. 103 - 108, http://dx.doi.org/10.5963/PHF0202007
,2012, 'Capturing greater 16S rRNA gene sequence diversity within the domain bacteria', Applied and Environmental Microbiology, 78, pp. 5938 - 5941, http://dx.doi.org/10.1128/AEM.01299-12
,2012, 'Flow cytometry in environmental microbiology: a rapid approach for the isolation of single cells for advanced molecular biology analysis.', Methods in Molecular Biology, 881, pp. 3 - 26, http://dx.doi.org/10.1007/978-1-61779-827-6_1
,2011, 'Comparative protein expression in different strains of the bloom-forming Cyanobacterium Microcystis aeruginosa', Molecular and Cellular Proteomics, http://dx.doi.org/10.1074/mcp.M110.003749-1
,2011, 'Detection of environmental microorganisms with a bead-based assay and quantum dots', International Journal of Biomedical Nanoscience and Nanotechnology, 2, pp. 75 - 95, http://dx.doi.org/10.1504/..038468
,2011, 'Iron uptake and toxin synthesis in the bloom-forming Microcystis aeruginosa under iron limitation', Environmental Microbiology, 13, pp. 1064 - 1077, http://dx.doi.org/10.1111/j.1462-2920.2010.02412.x
,2011, 'Molecular epidemiology and spatial distribution of a waterborne cryptosporidiosis outbreak in Australia', Applied and Environmental Microbiology, 77, pp. 7766 - 7771, http://dx.doi.org/10.1128/AEM.00616-11
,2011, 'Molecular epidemiology, spatiotemporal analysis, and ecology of sporadic human cryptosporidiosis in Australia', Applied and Environmental Microbiology, 77, pp. 7757 - 7765, http://dx.doi.org/10.1128/AEM.00615-11
,2011, 'Recovering greater fungal diversity from pristine and diesel fuel contaminated sub-Antarctic soil through cultivation using both a high and a low nutrient media approach', Frontiers in Microbiology, 2, pp. 1 - 14, http://dx.doi.org/10.3389/fmcib.2011.00217
,2009, 'Applications of flow cytometry in environmental microbiology and biotechnology', Extremophiles, 13, pp. 389 - 401, http://dx.doi.org/10.1007/s00792-009-0236-4
,2009, 'Cultivation of fastidious bacteria by viability staining and micromanipulation in a soil substrate membrane system', Applied and Environmental Microbiology, 75, pp. 3352 - 3354, http://dx.doi.org/10.1128/AEM.02407-08
,2009, 'Development of a two-color fluorescence in situ hybridization technique for species-level identification of human-infectious Cryptosporidium spp', Applied and Environmental Microbiology, 75, pp. 5996 - 5998, http://dx.doi.org/10.1128/AEM.00643-09
,2009, 'Glycoprotein 60 diversity in C. hominis and C. parvum causing human cryptosporidiosis in NSW, Australia', Experimental Parasitology, 122, pp. 124 - 127, http://dx.doi.org/10.1016/j.exppara.2009.02.006
,2009, 'Terminal restriction fragment length polymorphism for identification of cryptosporidium species in human feces', Applied and Environmental Microbiology, 75, pp. 108 - 112, http://dx.doi.org/10.1128/AEM.01341-08
,2008, 'Cultivating previously uncultured soil bacteria using a soil substrate membrane system', Nature Protocols, 3, pp. 1261 - 1269, http://dx.doi.org/10.1038/nprot.2008.102
,2008, 'Development of fluorescent in situ hybridisation for Cryptosporidium detection reveals zoonotic and anthroponotic transmission of sporadic cryptosporidiosis in Sydney', Journal of Microbiological Methods, 75, pp. 535 - 539, http://dx.doi.org/10.1016/j.mimet.2008.08.007
,2008, 'In vitro effects of noradrenaline on Sydney rock oyster (Saccostrea glomerata) hemocytes', Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology, 151, pp. 691 - 697, http://dx.doi.org/10.1016/j.cbpa.2008.08.028
,2008, 'Potential Use of Quantum Dots in Flow Cytometry', International Journal of Molecular Sciences, 9, pp. 2622 - 2638, http://dx.doi.org/10.3390/ijms9122622
,2007, 'Closed-tube DNA extraction using a thermostable proteinase is highly sensitive, capable of single parasite detection', Biotechnology Letters, 29, pp. 1831 - 1837, http://dx.doi.org/10.1007/s10529-007-9487-2
,2007, 'Quantum dots as alternatives to organic fluorophores for Cryptosporidium detection using conventional flow cytometry and specific monoclonal antibodies: lessons learned', CYTOMETRY PART A, 71A, pp. 265 - 271, http://dx.doi.org/10.1002/cyto.a.20381
,2006, 'A naturally occurring novel allele of Escherichia coli outer membrane protein A reduces sensitivity to bacteriophage', Applied and Environmental Microbiology, 72, pp. 7930 - 7932, http://dx.doi.org/10.1128/AEM.01040-06
,2006, 'Applying fluorescence technology to the recovery and isolation of Cryptosporidium and Giardia from industrial wastewater', Water Research, 40, pp. 541 - 548, http://dx.doi.org/10.1016/j.watres.2005.11.037
,2006, 'Catalyzed reporter deposition-fluorescence in situ hybridization allows for enrichment-independent detection of microcolony-forming soil bacteria', Applied and Environmental Microbiology, 72, pp. 918 - 922, http://dx.doi.org/10.1128/AEM.72.1.918-922.2006
,2006, 'Ecological advantages of autolysis during the development and dispersal of Pseudoalteromonas tunicata biofilms', Applied and Environmental Microbiology, 72, pp. 5414 - 5420, http://dx.doi.org/10.1128/AEM.00546-06
,2006, 'Quantitative and qualitative comparisons of Cryptosporidium faecal purification procedures for the isolation of oocysts suitable for proteomic analysis', International Journal for Parasitology, 36, pp. 811 - 819, http://dx.doi.org/10.1016/j.ijpara.2006.02.023
,2005, 'Microcolony cultivation on a soil-substrate membrane system selects for previously uncultured soil bacteria', Applied and Environmental Microbiology, 71, pp. 8174 - 8720, http://dx.doi.org/10.1128/AEM.71.12.8714-8720.2005
,2004, 'Studying the purity and recovery of GFP-labelled bacteria for culturing and molecular analysis following fluorescence activated cell sorting using a benchtop flow cytometer', Microbial Ecology, 48, pp. 239 - 245, http://dx.doi.org/10.1007/s00248-003-1069-9
,2003, 'Analysis-only Detection of Giardia by Combining Immunomagnetic Separation and Two-Color Flow Cytometry', Cytometry Part A, 51, pp. 79 - 86
,2003, 'A fluorescent natural product for ultra sensitive detection of proteins in 1-D and 2-D gel electrophoresis', Proteomics, 3, pp. 2273 - 2288, http://dx.doi.org/10.1002/pmic.200300578
,2003, 'Analysis-only Detection of Giardia by Combining Immunomagnetic Separation and Two-Color Flow Cytometry', CYTOMETRY PART A, 51A, pp. 79 - 86, http://dx.doi.org/10.1002/cyto.a.10009
,2003, 'Application of the novel fluorescent dye Beljian red to the differentiation of Giardia cysts', Journal of Microbiological Methods, 52, pp. 133 - 135, http://dx.doi.org/10.1016/S0167-7012(02)00130-6
,2001, 'Detection of oxytetracycline production by Streptomyces rimosus in soil microcosms by combining whole-cell biosensors and flow cytometry', Applied and Environmental Microbiology, 67, pp. 239 - 244, http://dx.doi.org/10.1128/AEM.67.1.239-244.2001
,2000, 'A novel two-color flow cytometric assay for the detection of Cryptosporidium in environmental water samples', Cytometry, 41, pp. 216 - 222, http://dx.doi.org/10.1002/1097-0320(20001101)41:3<216::AID-CYTO9>3.0.CO;2-R
,2000, 'Fluorescence staining and flow cytometry for monitoring microbial cells', Journal of Immunological Methods, 243, pp. 191 - 210, http://dx.doi.org/10.1016/S0022-1759(00)00234-9
,2000, 'An immunoglobulin G1 monoclonal antibody highly specific to the wall of Cryptosporidium oocysts', Clinical and Diagnostic Laboratory Immunology, 7, pp. 745 - 750, http://dx.doi.org/10.1128/CDLI.7.5.745-750.2000
,2000, 'Why do cytotoxic T lymphocytes fail to eliminate hepatitis C virus? Lessons from studies using major histocompatibility complex class 1 peptide tetramers', Philosophical Transactions of the Royal Society of London Series B: Biological Sciences, pp. 1085 - 1092, http://dx.doi.org/10.1098/rstb.2000.0646
,1999, 'Comparison of Cryptosporidium-specific and Giardia-specific monoclonal antibodies for monitoring water samples', Water Research, 33, pp. 1611 - 1617, http://dx.doi.org/10.1016/S0043-1354(98)00398-4
,Conference Papers
2008, 'UV LED excited time-gated luminescence flow cytometry: Evaluation for rare-event particle counting', in Progress in Biomedical Optics and Imaging - Proceedings of SPIE, http://dx.doi.org/10.1117/12.762077
,2005, 'Cryptosporidium and Giardia as model pathogens in industry wastewater', in Australian Water Association (ed.), Australian Water Association (AWA) Ozwater Convention and Exhibition, Canberra, Australia, presented at AWA Speciality Conference, Canberra, Australia, 22 June 2005 - 23 June 2005
,2005, 'Pathogen detection strategies for the environment', in Australian Water Association (ed.), Australian Water Association (AWA) Ozwater Convention and Exhibition, Brisbane, Qld, presented at Australian Water Association (AWA) Ozwater Convention and Exhibition, Brisbane, Qld, 08 May 2005 - 12 May 2005
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