By Professor Ewa Magdalena Goldys

Journal articles

Xie Y; Habibalahi A; Anwer AG; Wahi K; Bailey J; Lin F; Gatt C; Johansson EMV; Chtanova T; Holst J; Goldys E; Zanini F, 2025, 'Integration of hyperspectral imaging and transcriptomics from individual cells with SpectralSeq', Genome Research, 35, pp. 1809 - 1820, http://dx.doi.org/10.1101/gr.280014.124

Horta F; Sakkas D; Ledger W; Goldys EM; Gilchrist RB, 2025, 'Could metabolic imaging and artificial intelligence provide a novel path to non-invasive aneuploidy assessments? A certain clinical need', Reproduction, Fertility and Development, 37, http://dx.doi.org/10.1071/rd24122

Wu HH; Handley S; Knab A; Bhargava A; Goldys EM; Pollock CA; Saad S, 2025, 'WCN25-79 NON-INVASIVE DIAGNOSIS OF CHRONIC KIDNEY DISEASE BY MACHINE-LEARNING BASED EVALUATION OF URINARY EXFOLIATED PROXIMAL TUBULE CELL MULTISPECTRAL AUTOFLUORESCENCE', Kidney International Reports, 10, pp. s60 - s61, http://dx.doi.org/10.1016/j.ekir.2024.11.168

Deng F; Li Y; Yang B; Sang R; Deng W; Kansara M; Lin F; Thavaneswaran S; Thomas DM; Goldys EM, 2024, 'Topological barrier to Cas12a activation by circular DNA nanostructures facilitates autocatalysis and transforms DNA/RNA sensing', Nature Communications, 15, pp. 1818, http://dx.doi.org/10.1038/s41467-024-46001-8

Deng F; Sang R; Li Y; Yang D; Mckinnirey F; Deng W; Goldys EM, 2024, 'Towards understanding Trans-cleavage of natural and synthetic nucleic acids by Cas12a for sensitive CRISPR biosensing', Microchemical Journal, 207, pp. 111850, http://dx.doi.org/10.1016/j.microc.2024.111850

Campbell JM; Habibalahi A; Agha A; Handley S; Knab A; Xu X; Bhargava A; Lei Z; Mackevicius M; Tian Y; Mahbub SB; Anwer AG; Gronthos S; Paton S; Grey ST; Wu L; Gilchrist RB; Goldys EM, 2024, 'Single cell, Label free Characterisation of Human Mesenchymal Stromal cell Stemness and Future Growth Potential by Autofluorescence Multispectral Imaging', Stem Cell Reviews and Reports, 20, pp. 2283 - 2292, http://dx.doi.org/10.1007/s12015-024-10778-4

Lees F; Mahbub SB; Gosnell ME; Campbell JM; Weedon H; Habibalahi A; Goldys EM; Wechalekar MD; Hutchinson MR; Crotti TN, 2024, 'Utilising Hyperspectral Autofluorescence Imaging in the Objective Assessment of Disease State and Pain in Patients with Rheumatoid Arthritis', International Journal of Molecular Sciences, 25, http://dx.doi.org/10.3390/ijms252211996

Campbell JM; Gosnell M; Agha A; Handley S; Knab A; Anwer AG; Bhargava A; Goldys EM, 2024, 'Label-Free Assessment of Key Biological Autofluorophores: Material Characteristics and Opportunities for Clinical Applications', Advanced Materials, 36, http://dx.doi.org/10.1002/adma.202403761

Campbell JM; Mahbub SB; Anwer AG; Habibalahi A; Gronthos S; Paton S; Grey ST; Wu LE; Gilchrist RB; Goldys EM, 2024, 'Multispectral Imaging of Collagen, NAD(P)H and Flavin Autofluorescence in Mesenchymal Stem Cells Undergoing Trilineage Differentiation', Cells, 13, http://dx.doi.org/10.3390/cells13201731

Handley S; Anwer AG; Knab A; Bhargava A; Goldys EM, 2024, 'AutoMitoNetwork: Software for analyzing mitochondrial networks in autofluorescence images to enable label-free cell classification', Cytometry Part A, 105, pp. 688 - 703, http://dx.doi.org/10.1002/cyto.a.24889

HL WU H; THE NGUYEN L; BHAGAVATH V; GOLDYS EWA; POLLOCK C; SAAD S, 2024, '499-P: Association between Diabetic Retinopathy and Number of Urinary Exfoliated Proximal Tubule Kidney Cells', Diabetes, 73, http://dx.doi.org/10.2337/db24-499-p

Chandrasekara CMN; Gemikonakli G; Mach J; Sang R; Anwer AG; Agha A; Goldys EM; Hilmer SN; Campbell JM, 2024, 'Ageing and Polypharmacy in Mesenchymal Stromal Cells: Metabolic Impact Assessed by Hyperspectral Imaging of Autofluorescence', International Journal of Molecular Sciences, 25, http://dx.doi.org/10.3390/ijms25115830

Zhou E; Mahbub SB; Goldys EM; Clement S, 2024, 'Developing a Prototype Device for Assessing Meat Quality Using Autofluorescence Imaging and Machine Learning Techniques', Electronics Switzerland, 13, http://dx.doi.org/10.3390/electronics13091623

Nankivell V; Vidanapathirana AK; Hoogendoorn A; Tan JTM; Verjans J; Psaltis PJ; Hutchinson MR; Gibson BC; Lu Y; Goldys E; Zheng G; Bursill CA, 2024, 'Targeting macrophages with multifunctional nanoparticles to detect and prevent atherosclerotic cardiovascular disease', Cardiovascular Research, 120, pp. 819 - 838, http://dx.doi.org/10.1093/cvr/cvae099

Knab A; Anwer AG; Pedersen B; Handley S; Marupally AG; Habibalahi A; Goldys EM, 2024, 'Towards label-free non-invasive autofluorescence multispectral imaging for melanoma diagnosis', Journal of Biophotonics, 17, http://dx.doi.org/10.1002/jbio.202300402

Yang B; Sang R; Li Y; Goldys EM; Deng W, 2024, 'Improved effectiveness of X-PDT against human triple-negative breast cancer cells through the use of liposomes co-loaded with protoporphyrin IX and perfluorooctyl bromide', Journal of Materials Chemistry B, 12, pp. 3764 - 3773, http://dx.doi.org/10.1039/d4tb00011k

Yang B; Sang R; Li Y; Goldys E; Deng W, 2024, 'Abstract 5743: Liposome platform enables X-ray induced photodynamic therapy treatment against human triple negative breast cancer cells', Cancer Research, 84, pp. 5743 - 5743, http://dx.doi.org/10.1158/1538-7445.am2024-5743

Richani D; Poljak A; Wang B; Mahbub SB; Biazik J; Campbell JM; Habibalahi A; Stocker WA; Marinova MB; Nixon B; Bustamante S; Skerrett-Byrne D; Harrison CA; Goldys E; Gilchrist RB, 2024, 'Oocyte and cumulus cell cooperativity and metabolic plasticity under the direction of oocyte paracrine factors', American Journal of Physiology Endocrinology and Metabolism, 326, pp. E366 - E381, http://dx.doi.org/10.1152/AJPENDO.00148.2023

Wu HH; Long The Nguyen ; Venkatesha V; Goldys E; Pollock C; Saad S, 2024, 'WCN24-213 DIABETIC KIDNEY DISEASE AND NUMBER OF URINARY EXFOLIATED PROXIMAL TUBULE CELLS: IS THERE A LINK?', Kidney International Reports, 9, pp. s613, http://dx.doi.org/10.1016/j.ekir.2024.02.1290

Mehta M; Bui TA; Yang X; Aksoy Y; Goldys EM; Deng W, 2023, 'Lipid-Based Nanoparticles for Drug/Gene Delivery: An Overview of the Production Techniques and Difficulties Encountered in Their Industrial Development', ACS Materials Au, 3, pp. 600 - 619, http://dx.doi.org/10.1021/acsmaterialsau.3c00032

Thigale S; Wang Q; Mishra D; Goldys EM; Atakaramians S, 2023, 'Terahertz imaging: a diagnostic technology for prevention of grass seed infestation', Optics Express, 31, pp. 37030 - 37039, http://dx.doi.org/10.1364/OE.501194

Campbell JM; Habibalahi A; Handley S; Agha A; Mahbub SB; Anwer AG; Goldys EM, 2023, 'Emerging clinical applications in oncology for non-invasive multi- and hyperspectral imaging of cell and tissue autofluorescence', Journal of Biophotonics, 16, http://dx.doi.org/10.1002/jbio.202300105

Campbell JM; Walters SN; Habibalahi A; Mahbub SB; Anwer AG; Handley S; Grey ST; Goldys EM, 2023, 'Pancreatic Islet Viability Assessment Using Hyperspectral Imaging of Autofluorescence', Cells, 12, http://dx.doi.org/10.3390/cells12182302

Deng F; Li Y; Hall T; Vesey G; Goldys EM, 2023, 'Bi-functional antibody-CRISPR/Cas12a ribonucleoprotein conjugate for improved immunoassay performance', Analytica Chimica Acta, 1259, pp. 341211, http://dx.doi.org/10.1016/j.aca.2023.341211

Rende U; Guller A; Goldys EM; Pollock C; Saad S, 2023, 'Diagnostic and prognostic biomarkers for tubulointerstitial fibrosis', Journal of Physiology, 601, pp. 2801 - 2826, http://dx.doi.org/10.1113/JP284289

Campbell JM; Mahbub SB; Habibalahi A; Agha A; Handley S; Anwer AG; Goldys EM, 2023, 'Clinical applications of non-invasive multi and hyperspectral imaging of cell and tissue autofluorescence beyond oncology', Journal of Biophotonics, 16, http://dx.doi.org/10.1002/jbio.202200264

Habibalahi A; Campbell JM; Walters SN; Mahbub SB; Anwer AG; Grey ST; Goldys EM, 2023, 'Automated pancreatic islet viability assessment for transplantation using bright-field deep morphological signature', Computational and Structural Biotechnology Journal, 21, pp. 1851 - 1859, http://dx.doi.org/10.1016/j.csbj.2023.02.039

Hutchinson M; Barratt DT; Holmes J; Mustafa S; Bajic JE; Kolarich D; Packer NH; Goldys EM; McKeown I; Ma-Wyatt A; Semmler C, 2023, 'From blood markers to performance prediction: New insights for athletes and beyond', Brain Behavior and Immunity, 114, pp. 45 - 46, http://dx.doi.org/10.1016/j.bbi.2024.01.136

Deng F; Li Y; Li B; Goldys EM, 2022, 'Increasing trans-cleavage catalytic efficiency of Cas12a and Cas13a with chemical enhancers: Application to amplified nucleic acid detection', Sensors and Actuators B Chemical, 373, pp. 132767, http://dx.doi.org/10.1016/j.snb.2022.132767

Sang R; Deng F; Engel A; Goldys E; Deng W; Engel A, 2022, 'Lipid-polymer nanocarrier platform enables X-ray induced photodynamic therapy against human colorectal cancer cells', Biomedicine and Pharmacotherapy, 155, pp. 113837, http://dx.doi.org/10.1016/j.biopha.2022.113837

Kołtan S; Ziętkiewicz M; Grześk E; Becht R; Berdej-Szczot E; Cienkusz M; Ewertowska M; Heropolitańska-Pliszka E; Krysiak N; Lewandowicz-Uszyńska A; Mach-Tomalska M; Matyja-Bednarczyk A; Milchert M; Napiórkowska-Baran K; Pieniawska-Śmiech K; Pituch-Noworolska A; Renke J; Roliński J; Rywczak I; Stelmach-Gołdyś A; Strach M; Suchanek H; Sulicka-Grodzicka J; Szczawińska-Popłonyk A; Tokarski S; Więsik-Szewczyk E; Wolska-Kuśnierz B; Zeman K; Pac M, 2022, 'COVID-19 in unvaccinated patients with inborn errors of immunity—polish experience', Frontiers in Immunology, 13, pp. 953700, http://dx.doi.org/10.3389/fimmu.2022.953700

Li Y; Deng F; Goldys EM, 2022, 'A simple and versatile CRISPR/Cas12a-based immunosensing platform: Towards attomolar level sensitivity for small protein diagnostics', Talanta, 246, pp. 123469, http://dx.doi.org/10.1016/j.talanta.2022.123469

Wu HHL; Goldys EM; Pollock CA; Saad S, 2022, 'Exfoliated Kidney Cells from Urine for Early Diagnosis and Prognostication of CKD: The Way of the Future?', International Journal of Molecular Sciences, 23, http://dx.doi.org/10.3390/ijms23147610

Habibalahi A; Campbell JM; Bertoldo MJ; Mahbub SB; Goss DM; Ledger WL; Gilchrist RB; Wu LE; Goldys EM, 2022, 'Unique Deep Radiomic Signature Shows NMN Treatment Reverses Morphology of Oocytes from Aged Mice', Biomedicines, 10, http://dx.doi.org/10.3390/biomedicines10071544

Zhang C; Yang B; Biazik J; Webster RF; Xie W; Tang J; Allioux F-M; Abbasi R; Mousavi M; Goldys EM; Killian KA; Chandrawati R; Esrafilzadeh D; Kalantar-Zadeh K, 2022, 'Gallium Nanodroplets are Anti-Inflammatory without Interfering with Iron Homeostasis', ACS Nano, http://dx.doi.org/10.1021/acsnano.1c10981

Campbell JM; Mahbub SB; Bertoldo MJ; Habibalahi A; Goss DM; Ledger WL; Gilchrist RB; Wu LE; Goldys EM, 2022, 'Multispectral autofluorescence characteristics of reproductive aging in old and young mouse oocytes', Biogerontology, 23, pp. 237 - 249, http://dx.doi.org/10.1007/s10522-022-09957-y

Habibalahi A; Allende A; Michael J; Anwer AG; Campbell J; Mahbub SB; Bala C; Coroneo MT; Goldys EM, 2022, 'Pterygium and Ocular Surface Squamous Neoplasia: Optical Biopsy Using a Novel Autofluorescence Multispectral Imaging Technique', Cancers, 14, http://dx.doi.org/10.3390/cancers14061591

Deng F; Li Y; Qiao L; Goldys E, 2022, 'A CRISPR/Cas12a-assisted on-fibre immunosensor for ultrasensitive small protein detection in complex biological samples', Analytica Chimica Acta, 1192, pp. 339351, http://dx.doi.org/10.1016/j.aca.2021.339351

HABIBALAHI A; BERTOLDO MJ; MAHBUB SB; CAMPBELL JM; GOSS DM; LEDGER WL; GILCHRIST RB; WU LE; GOLDYS EM, 2022, 'Assessment of Oocyte Quality Using Deep Radiomic Signature of Oocyte Morphology in the Mouse', Fertility & Reproduction, 04, pp. 135 - 135, http://dx.doi.org/10.1142/s2661318222740474

RICHANI D; ZHAO Y; LIAO X; CAMPBELL JM; HABIBALAHI A; STOCKER WA; GOLDYS EM; HARRISON CA; GILCHRIST RB, 2022, 'Novel Oocyte-Secreted Factors Improve Mouse IVM Outcomes', Fertility & Reproduction, 04, pp. 132 - 132, http://dx.doi.org/10.1142/s2661318222740449

HABIBALAHI A; CULLINAN R; TILLIA L; DALATI S; MAHBUB SB; CAMPBELL JM; RIEPSAMEN A; GILCHRIST RB; LEDGER WL; GOLDYS EM, 2022, 'Prediction of Progression from Oocyte to Useable Blastocyst Using Deep Radiomic Signatures: Preliminary Results', Fertility & Reproduction, 04, pp. 136 - 136, http://dx.doi.org/10.1142/s2661318222740486

Tan TCY; Mahbub SB; Campbell JM; Habibalahi A; Campugan CA; Rose RD; Chow DJX; Mustafa S; Goldys EM; Dunning KR, 2021, 'Non-invasive, label-free optical analysis to detect aneuploidy within the inner cell mass of the preimplantation embryo', Human Reproduction, 37, pp. 14 - 29, http://dx.doi.org/10.1093/humrep/deab233

Gosnell ME; Staikopoulos V; Anwer AG; Mahbub SB; Hutchinson MR; Mustafa S; Goldys EM, 2021, 'Autofluorescent imprint of chronic constriction nerve injury identified by deep learning', Neurobiology of Disease, 160, http://dx.doi.org/10.1016/j.nbd.2021.105528

Mahbub SB; Nguyen LT; Habibalahi A; Campbell JM; Anwer AG; Qadri UM; Gill A; Chou A; Wong MG; Gosnell ME; Pollock CA; Saad S; Goldys EM, 2021, 'Non-invasive assessment of exfoliated kidney cells extracted from urine using multispectral autofluorescence features', Scientific Reports, 11, pp. 10655, http://dx.doi.org/10.1038/s41598-021-89758-4

Mahbub SB; Nguyen LT; Habibalahi A; Campbell JM; Anwer AG; Qadri UM; Gill A; Chou A; Wong MG; Gosnell ME; Pollock CA; Saad S; Goldys EM, 2021, 'Publisher Correction: Non-invasive assessment of exfoliated kidney cells extracted from urine using multispectral autofluorescence features (Scientific Reports, (2021), 11, 1, (10655), 10.1038/s41598-021-89758-4)', Scientific Reports, 11, pp. 18727, http://dx.doi.org/10.1038/s41598-021-96178-x

Li Y; Deng F; Goldys EM, 2021, 'A versatile CRISPR/Cas12a-based sensitivity amplifier suitable for commercial HRP-based ELISA kits', Sensors and Actuators B Chemical, 347, pp. 130533, http://dx.doi.org/10.1016/j.snb.2021.130533

Guller A; Kuschnerus I; Rozova V; Nadort A; Yao Y; Khabir Z; Garcia‐bennett A; Liang L; Polikarpova A; Qian Y; Goldys EM; Zvyagin AV, 2021, 'Chick embryo experimental platform for micrometastases research in a 3d tissue engineering model: Cancer biology, drug development, and nanotechnology applications', Biomedicines, 9, pp. 1578, http://dx.doi.org/10.3390/biomedicines9111578

Li Y; Deng F; Hall T; Vesey G; Goldys EM, 2021, 'CRISPR/Cas12a-powered immunosensor suitable for ultra-sensitive whole Cryptosporidium oocyst detection from water samples using a plate reader', Water Research, 203, http://dx.doi.org/10.1016/j.watres.2021.117553

Tan CY; Mahbub SB; Campugan CA; Campbell J; Habibalahi A; Chow DJX; Mustafa S; Goldys EM; Dunning KR, 2021, 'O-083 Non-invasive, label-free optical analysis to detect aneuploidy within the inner cell mass of the preimplantation embryo', Human Reproduction, 36, http://dx.doi.org/10.1093/humrep/deab125.013

Rozova VS; Anwer AG; Guller AE; Es HA; Khabir Z; Sokolova AI; Gavrilov MU; Goldys EM; Warkiani ME; Thiery JP; Zvyagin AV, 2021, 'Machine learning reveals mesenchymal breast carcinoma cell adaptation in response to matrix stiffness', Plos Computational Biology, 17, pp. e1009193, http://dx.doi.org/10.1371/journal.pcbi.1009193

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