Select Publications
Journal articles
2015, 'Graded porous polyurethane foam: A potential scaffold for oro-maxillary bone regeneration', Materials Science and Engineering C, 51, pp. 329 - 335, http://dx.doi.org/10.1016/j.msec.2015.03.002
,2015, 'Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas', Genes Chromosomes and Cancer, 54, pp. 303 - 314, http://dx.doi.org/10.1002/gcc.22243
,2015, 'Resistance to hepatitis C virus: Potential genetic and immunological determinants', The Lancet Infectious Diseases, 15, pp. 451 - 460, http://dx.doi.org/10.1016/S1473-3099(14)70965-X
,2015, 'Dentistry waste treatment through enzymatic fuel cells', ORAL and Implantology, 8, pp. 12 - 18
,2015, 'Inhibitors of the hepatitis C virus polymerase; mode of action and resistance', Viruses, 7, pp. 5206 - 5224, http://dx.doi.org/10.3390/v7102868
,2015, 'Medical waste to energy: Is it possible?', International Journal of Clinical Dentistry, 7, pp. 383 - 388
,2015, 'Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C', Antiviral Therapy, 20, pp. 199 - 208, http://dx.doi.org/10.3851/IMP2821
,2015, 'Transmitted/founder viruses rapidly escape from CD8+ T cell responses in acute hepatitis C virus infection', Journal of Virology, 89, pp. 5478 - 5490, http://dx.doi.org/10.1128/JVI.03717-14
,2015, 'Transmission of Hepatitis C Virus among Prisoners, Australia, 2005–2012.', Emerging Infectious Diseases, 21, pp. 765 - 774, http://dx.doi.org/10.3201/eid2105.141832
,2014, 'DELETERIOUS PASSENGER MUTATIONS AS A BIOMARKER FOR HEPATOCELLULAR CARCINOMA', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, 10, pp. 44 - 44, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000344745100124&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'Short duration of lamivudine for the prevention of hepatitis B virus transmission in pregnancy: Lack of potency and selection of resistance mutations', Journal of Viral Hepatitis, 21, pp. 809 - 817, http://dx.doi.org/10.1111/jvh.12212
,2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643
,2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643
,2014, 'Per-event probability of hepatitis C infection during sharing of injecting equipment', PLoS ONE, 9, pp. e100749, http://dx.doi.org/10.1371/journal.pone.0100749
,2014, 'Current understanding on the role of standard and immunoproteasomes in inflammatory/immunological pathways of multiple sclerosis', Autoimmune Diseases, 2014, http://dx.doi.org/10.1155/2014/739705
,2014, 'Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions.', Microb Inform Exp, 4, pp. 1, http://dx.doi.org/10.1186/2042-5783-4-1
,2014, 'A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection', BioMed Research International, 2014, pp. 264519, http://dx.doi.org/10.1155/2014/264519
,2014, 'Lower third molar germectomy: The flap recovery on the lower second molar. a clinical study', International Journal of Clinical Dentistry, 7, pp. 289 - 294
,2014, 'Medical waste to energy: Experimental study', ORAL and Implantology, 6, pp. 83 - 88, http://dx.doi.org/10.11138/orl/2013.6.4.083
,2014, 'Viral quasispecies assembly via maximal clique enumeration', Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8394 LNBI, pp. 309 - 310, http://dx.doi.org/10.1007/978-3-319-05269-4-25
,2014, 'Evidence that hepatitis C virus genome partly controls infection outcome', Evolutionary Applications, 7, pp. 533 - 547, http://dx.doi.org/10.1111/eva.12151
,2014, 'Exploration of genetically determined resistance against hepatitis C infection in high-risk injecting drug users', Journal of Viral Hepatitis, 21, pp. e65 - e73, http://dx.doi.org/10.1111/jvh.12232
,2014, 'Protection against hepatitis C infection via NK cells in highly-exposed uninfected injecting drug users', Journal of Hepatology, 61, pp. 738 - 745, http://dx.doi.org/10.1016/j.jhep.2014.05.013
,2013, 'Squamous cell carcinoma of the oral cavity and hyperhomocysteinemia. There's a correlation? A preliminary study', International Journal of Clinical Dentistry, 6, pp. 219 - 225
,2013, 'Gingival hypertrophy- hyperplasia? peripheral ameloblastoma!', International Journal of Clinical Dentistry, 6, pp. 1 - 10
,2013, 'Piezosurgery vs high speed rotary handpiece: A comparison between the two techniques in the impacted third molar surgery', ORAL and Implantology, 6, pp. 5 - 10, http://dx.doi.org/10.11138/orl/2013.6.1.005
,2013, 'Correlates and characteristics of hepatitis C virus-specific T-cell immunity in exposed uninfected high-risk prison inmates', Journal of Viral Hepatitis, 20, pp. e96 - e106, http://dx.doi.org/10.1111/jvh.12016
,2013, 'Increasing viral dose causes a reversal in CD8+ T cell immunodominance during primary influenza infection due to differences in antigen presentation, T cell avidity, and precursor numbers', Journal of Immunology, 190, pp. 36 - 47, http://dx.doi.org/10.4049/jimmunol.1200089
,2013, 'Rare occurrence of occult hepatitis C virus in apparently uninfected injecting drug users: a two-centre, masked, case-control study', J Viral Hepat, 20, pp. 725 - 728, http://dx.doi.org/10.1111/jvh.12098
,2012, 'BLOODY PRISONS: INCIDENCE OF RISK BEHAVIOURS AND HEPATITIS C VIRUS TRANSMISSION IN AN AUSTRALIAN PRISONER COHORT', DRUG AND ALCOHOL REVIEW, 31, pp. 57 - 57, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000311236700175&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2012, '801 T CELLS CO-EXPRESSING CCR2, CCR5, CXCR3, AND CXCR6 ARE PREFERENTIALLY ENRICHED IN THE HCV-INFECTED LIVER', Journal of Hepatology, 56, pp. S313 - S313, http://dx.doi.org/10.1016/s0168-8278(12)60813-7
,2012, 'Contribution of intra- and interhost dynamics to norovirus evolution', Journal of Virology, 86, pp. 3219 - 3229, http://dx.doi.org/10.1128/JVI.06712-11
,2012, 'GemSIM: General, Error-Model based SIMulator of next-generation sequencing data', BMC Genomics, 13, pp. 1 - 9, http://dx.doi.org/10.1186/1471-2164-13-74
,2012, 'Next generation deep sequencing and vaccine design: Today and tomorrow', Trends in Biotechnology, 30, pp. 443 - 452, http://dx.doi.org/10.1016/j.tibtech.2012.05.005
,2011, 'Biopsy of oral cavity: A retrospective study 10 years', International Journal of Clinical Dentistry, 4, pp. 329 - 341
,2011, 'Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification', BMC Bioinformatics, 12, pp. A2 - A2
,2011, 'Epidemiological and clinical consequences of within-host evolution.', Trends in Microbiology, 19, pp. 24 - 32
,2011, 'Sequential Bottlenecks Drive Viral Evolution in Early Acute Hepatitis C Virus Infection', PLoS Pathog, 7, pp. e1002243, http://dx.doi.org/10.1371/journal.ppat.1002243
,2010, 'Floor of the mouth's lipoma: A retrospective study ten years', International Journal of Clinical Dentistry, 3, pp. 111 - 120
,2010, 'Trade-offs in resource allocation in the intracellular life-cycle of hepatitis C virus', Journal of Theoretical Biology, 267, pp. 565 - 572, http://dx.doi.org/10.1016/j.jtbi.2010.09.031
,2009, 'The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis', Proceedings of the National Academy of Sciences of the United States of America, 106, pp. 14711 - 14715, http://dx.doi.org/10.1073/pnas.0902437106
,2008, 'Effects and interactions in an environmentally relevant mixture of pharmaceuticals', Toxicological Sciences, 102, pp. 129 - 137, http://dx.doi.org/10.1093/toxsci/kfm291
,2008, 'Interpreting genotype cluster sizes of Mycobacterium tuberculosis isolates typed with IS6110 and spoligotyping', Infection Genetics and Evolution, 8, pp. 182 - 190, http://dx.doi.org/10.1016/j.meegid.2007.12.004
,2008, 'Modeling the in vitro 20S proteasome activity: The effect of PA28-alpha beta and of the sequence and length of polypeptides on the degradation kinetics', Journal of Molecular Biology, 377, pp. 1607 - 1617, http://dx.doi.org/10.1016/j.jmb.2008.01.086
,2008, 'Proteasome modelling algorithm to predict in vitro kinetics of 20S proteasome degradation', Journal of Molecular Biology, 377, pp. 1607 - 1617, http://dx.doi.org/10.1016/j.jmb.2008.01.086
,2008, 'spolTools: online utilities for analyzing spoligotypes of the Mycobacterium tuberculosis complex', Bioinformatics, 24, pp. 2414 - 2415, http://dx.doi.org/10.1093/bioinformatics/btn434
,2006, 'Using approximate Bayesian computation to estimate tuberculosis transmission parameters from genotype data', Genetics, 173, pp. 1511 - 1520, http://dx.doi.org/10.1534/genetics.106.055574
,2005, 'A mathematical model of protein degradation by the proteasome', Biophysical Journal, 88, pp. 2422 - 2432, http://bioinformatics.bio.uu.nl/rdb/pdf/Luciani_bj05.pdf
,2004, 'Acute anicteric viral hepatitis type A with anomalous course. A case report', Gazzetta Medica Italiana Archivio per le Scienze Mediche, 163, pp. 27 - 30
,2004, 'Hematologic changes during AIDS infection. A case report', Gazzetta Medica Italiana Archivio per le Scienze Mediche, 163, pp. 19 - 21
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