By Professor Fabio Luciani

Journal articles

Eltahla AA; Rizzetto S; Pirozyan MR; Betz-Stablein BD; Venturi V; Kedzierska K; Lloyd AR; Bull RA; Luciani F; Maher L, 2016, 'Linking the T cell receptor to the single cell transcriptome in antigen-specific human T cells', Immunology and Cell Biology, 94, pp. 604 - 611, http://dx.doi.org/10.1038/icb.2016.16

Audsley J; Bent SJ; Littlejohn M; Avihingsanon A; Matthews G; Bowden S; Bayliss J; Luciani F; Yuen L; Fairley CK; Locarnini S; Lewin SR; Sasadeusz J, 2016, 'Effects of long-term tenofovir-based combination antiretroviral therapy in HIV-hepatitis B virus coinfection on persistent hepatitis B virus viremia and the role of hepatitis B virus quasispecies diversity', AIDS, 30, pp. 1597 - 1606, http://dx.doi.org/10.1097/QAD.0000000000001080

Fiches GN; Eyre NS; Aloia AL; Van Der Hoek K; Betz-Stablein B; Luciani F; Chopra A; Beard MR; Maher L, 2016, 'HCV RNA traffic and association with NS5A in living cells', Virology, 493, pp. 60 - 74, http://dx.doi.org/10.1016/j.virol.2016.02.016

Mina MM; Cameron B; Luciani F; Vollmer-Conna U; Lloyd AR; Dolan K; Maher L, 2016, 'Natural killer cells in highly exposed hepatitis C-seronegative injecting drug users', Journal of Viral Hepatitis, 23, pp. 464 - 472, http://dx.doi.org/10.1111/jvh.12511

Luciani F, 2016, 'High-throughput sequencing and vaccine design', OIE Revue Scientifique Et Technique, 35, pp. 53 - 65, http://dx.doi.org/10.20506/rst.35.1.2417

Bull RA; Eltahla AA; Rodrigo C; Koekkoek SM; Walker M; Pirozyan MR; Betz-Stablein B; Toepfer A; Laird M; Oh S; Heiner C; Maher L; Schinkel J; Lloyd AR; Luciani F; Rasoli Pirozyan M, 2016, 'A method for near full-length amplification and sequencing for six hepatitis C virus genotypes', BMC Genomics, 17, pp. 247, http://dx.doi.org/10.1186/s12864-016-2575-8

Bartlett SR; Jacka B; Bull RA; Luciani F; Matthews GV; Lamoury FMJ; Hellard ME; Hajarizadeh B; Teutsch S; White B; Maher L; Dore GJ; Lloyd AR; Grebely J; Applegate TL, 2016, 'HIV infection and hepatitis C virus genotype 1a are associated with phylogenetic clustering among people with recently acquired hepatitis C virus infection', Infection Genetics and Evolution, 37, pp. 252 - 258, http://dx.doi.org/10.1016/j.meegid.2015.11.028

Betz-Stablein BD; Töpfer A; Littlejohn M; Yuen L; Colledge D; Sozzi V; Angus P; Thompson A; Revill P; Beerenwinkel N; Warner N; Luciani F, 2016, 'Single-molecule sequencing reveals complex genome variation of hepatitis B virus during 15 Years of chronic infection following liver transplantation', Journal of Virology, 90, pp. 7171 - 7183, http://dx.doi.org/10.1128/JVI.00243-16

Budzinska MA; Tu T; d'Avigdor WMH; McCaughan GW; Luciani F; Shackel NA, 2016, 'Accumulation of Deleterious Passenger Mutations Is Associated with the Progression of Hepatocellular Carcinoma.', PLoS One, 11, pp. e0162586, http://dx.doi.org/10.1371/journal.pone.0162586

Giannitelli SM; Basoli F; Mozetic P; Piva P; Bartuli FN; Luciani F; Arcuri C; Trombetta M; Rainer A; Licoccia S, 2015, 'Graded porous polyurethane foam: A potential scaffold for oro-maxillary bone regeneration', Materials Science and Engineering C, 51, pp. 329 - 335, http://dx.doi.org/10.1016/j.msec.2015.03.002

Zarzour P; Boelen L; Luciani F; Beck D; Sakthianandeswaren A; Mouradov D; Sieber OM; Hawkins NJ; Hesson LB; Ward RL; Wong JWH, 2015, 'Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas', Genes Chromosomes and Cancer, 54, pp. 303 - 314, http://dx.doi.org/10.1002/gcc.22243

Mina MM; Luciani F; Cameron B; Bull RA; Beard MR; Booth D; Lloyd AR, 2015, 'Resistance to hepatitis C virus: Potential genetic and immunological determinants', Lancet Infectious Diseases, 15, pp. 451 - 460, http://dx.doi.org/10.1016/S1473-3099(14)70965-X

Arcuri C; Luciani F; Piva P; Bartuli FN; Ottria L; Mecheri B; Licoccia S, 2015, 'Dentistry waste treatment through enzymatic fuel cells', Oral and Implantology, 8, pp. 12 - 18

Eltahla AA; Luciani F; White PA; Lloyd AR; Bull RA, 2015, 'Inhibitors of the hepatitis C virus polymerase; mode of action and resistance', Viruses, 7, pp. 5206 - 5224, http://dx.doi.org/10.3390/v7102868

Luciani F; Piva P; Caddeo F; Bartuli FN; Arcuri C, 2015, 'Medical waste to energy: Is it possible?', International Journal of Clinical Dentistry, 7, pp. 383 - 388

Applegate TL; Gaudieri S; Plauzolles A; Chopra A; Grebely J; Lucas M; Hellard M; Luciani F; Dore GJ; Matthews GV, 2015, 'Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C', Antiviral Therapy, 20, pp. 199 - 208, http://dx.doi.org/10.3851/IMP2821

Bull RA; Leung P; Gaudieri S; Deshpande P; Cameron B; Walker M; Chopra A; Lloyd AR; Luciani F; Dolan K; Haber P; Rawlinson W; Treloar C; Dore G; Maher L, 2015, 'Transmitted/founder viruses rapidly escape from CD8+ T cell responses in acute hepatitis C virus infection', Journal of Virology, 89, pp. 5478 - 5490, http://dx.doi.org/10.1128/JVI.03717-14

Bretaña N; Boelen L; Bull R; Teutsch S; White P; Lloyd A; Luciani F; Bretana N; Dolan K; Rawlinson W; Dore G; Maher L, 2015, 'Transmission of Hepatitis C Virus among Prisoners, Australia, 2005–2012.', Emerging Infectious Diseases, 21, pp. 765 - 774, http://dx.doi.org/10.3201/eid2105.141832

Tu T; Budzinska M; McCaughan GW; McLennan SV; Luciani F; Shackel N, 2014, 'DELETERIOUS PASSENGER MUTATIONS AS A BIOMARKER FOR HEPATOCELLULAR CARCINOMA', ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, 10, pp. 44 - 44, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000344745100124&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Ayres A; Yuen L; Jackson KM; Manoharan S; Glass A; Maley M; Yoo W; Hong SP; Kim SO; Luciani F; Bowden DS; Bayliss J; Levy MT; Locarnini SA, 2014, 'Short duration of lamivudine for the prevention of hepatitis B virus transmission in pregnancy: Lack of potency and selection of resistance mutations', Journal of Viral Hepatitis, 21, pp. 809 - 817, http://dx.doi.org/10.1111/jvh.12212

Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR; Bretana N, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction Abingdon England, 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Luciani F; Bretaña NAR; Teutsch S; Amin J; Topp L; Dore GJ; Maher L; Dolan K; Lloyd AR; Bretana N, 2014, 'A prospective study of hepatitis C incidence in Australian prisoners', Addiction (Abingdon, England), 109, pp. 1695 - 1706, http://dx.doi.org/10.1111/add.12643

Boelen L; Teutsch S; Wilson DP; Dolan K; Dore GJ; Lloyd AR; Luciani F; Maher L, 2014, 'Per-event probability of hepatitis C infection during sharing of injecting equipment', Plos One, 9, pp. e100749, http://dx.doi.org/10.1371/journal.pone.0100749

Bellavista E; Santoro A; Galimberti D; Comi C; Luciani F; Mishto M, 2014, 'Current understanding on the role of standard and immunoproteasomes in inflammatory/immunological pathways of multiple sclerosis', Autoimmune Diseases, 2014, http://dx.doi.org/10.1155/2014/739705

McElroy K; Thomas T; Luciani F, 2014, 'Deep sequencing of evolving pathogen populations: applications, errors, and bioinformatic solutions.', Microb Inform Exp, 4, pp. 1, http://dx.doi.org/10.1186/2042-5783-4-1

Leung P; Bull R; Lloyd A; Luciani F, 2014, 'A bioinformatics pipeline for the analyses of viral escape dynamics and host immune responses during an infection', Biomed Research International, 2014, pp. 264519, http://dx.doi.org/10.1155/2014/264519

Bartuli FN; Piva P; Savo A; Di Dio M; Luciani F; Arcuri C, 2014, 'Lower third molar germectomy: The flap recovery on the lower second molar. a clinical study', International Journal of Clinical Dentistry, 7, pp. 289 - 294

Arcuri C; Luciani F; Piva P; Bartuli FN; Ottria L; Mecheri B; Licoccia S, 2014, 'Medical waste to energy: Experimental study', Oral and Implantology, 6, pp. 83 - 88, http://dx.doi.org/10.11138/orl/2013.6.4.083

Töpfer A; Marschall T; Bull RA; Luciani F; Schönhuth A; Beerenwinkel N, 2014, 'Viral quasispecies assembly via maximal clique enumeration', Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8394 LNBI, pp. 309 - 310, http://dx.doi.org/10.1007/978-3-319-05269-4-25

Hartfield M; Bull R; White PA; Lloyd A; Luciani F; Alizon S; Maher L, 2014, 'Evidence that hepatitis C virus genome partly controls infection outcome', Evolutionary Applications, 7, pp. 533 - 547, http://dx.doi.org/10.1111/eva.12151

Sugden PB; Cameron B; Luciani F; Lloyd AR; Maher L, 2014, 'Exploration of genetically determined resistance against hepatitis C infection in high-risk injecting drug users', Journal of Viral Hepatitis, 21, pp. e65 - e73, http://dx.doi.org/10.1111/jvh.12232

Sugden PB; Cameron B; Mina M; Lloyd AR; Luciani F; Maher L; Dolan K, 2014, 'Protection against hepatitis C infection via NK cells in highly-exposed uninfected injecting drug users', Journal of Hepatology, 61, pp. 738 - 745, http://dx.doi.org/10.1016/j.jhep.2014.05.013

Bartuli FN; Piva P; Caddeo F; Luciani F; Arcuri C, 2013, 'Squamous cell carcinoma of the oral cavity and hyperhomocysteinemia. There's a correlation? A preliminary study', International Journal of Clinical Dentistry, 6, pp. 219 - 225

Luciani F; Cecchetti F; Piva P; Motta A; Bartuli FN; Arcuri C, 2013, 'Gingival hypertrophy- hyperplasia? peripheral ameloblastoma!', International Journal of Clinical Dentistry, 6, pp. 1 - 10

Bartuli FN; Luciani F; Caddeo F; De Chiara L; Di Dio M; Piva P; Ottria L; Arcuri C, 2013, 'Piezosurgery vs high speed rotary handpiece: A comparison between the two techniques in the impacted third molar surgery', Oral and Implantology, 6, pp. 5 - 10, http://dx.doi.org/10.11138/orl/2013.6.1.005

Cameron B; Galbraith S; Li H; Lloyd A; HITS investigators , 2013, 'Correlates and characteristics of hepatitis C virus-specific T-cell immunity in exposed uninfected high-risk prison inmates', Journal of Viral Hepatitis, 20, pp. e96 - e106, http://dx.doi.org/10.1111/jvh.12016

Luciani F; Sanders MT; Oveissi S; Pang KC; Chen W, 2013, 'Increasing viral dose causes a reversal in CD8+ T cell immunodominance during primary influenza infection due to differences in antigen presentation, T cell avidity, and precursor numbers', Journal of Immunology, 190, pp. 36 - 47, http://dx.doi.org/10.4049/jimmunol.1200089

Sugden PB; Pham TN; Ratnarajah S; Cameron B; Bull R; White PA; Michalak TI; Lloyd AR, 2013, 'Rare occurrence of occult hepatitis C virus in apparently uninfected injecting drug users: a two-centre, masked, case-control study', J Viral Hepat, 20, pp. 725 - 728, http://dx.doi.org/10.1111/jvh.12098

Mccredie L; Luciani F; Teutsch S; Amin J; Topp L; Dolan K; Lloyd A, 2012, 'BLOODY PRISONS: INCIDENCE OF RISK BEHAVIOURS AND HEPATITIS C VIRUS TRANSMISSION IN AN AUSTRALIAN PRISONER COHORT', DRUG AND ALCOHOL REVIEW, 31, pp. 57 - 57, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000311236700175&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Nguyen N; Luciani F; Cameron B; Keoshkerian E; Zekry A; Lloyd A, 2012, '801 T CELLS CO-EXPRESSING CCR2, CCR5, CXCR3, AND CXCR6 ARE PREFERENTIALLY ENRICHED IN THE HCV-INFECTED LIVER', Journal of Hepatology, 56, pp. S313 - S313, http://dx.doi.org/10.1016/s0168-8278(12)60813-7

Bull RA; Eden J-S; Luciani F; McElroy K; Rawlinson WD; White PA, 2012, 'Contribution of intra- and interhost dynamics to norovirus evolution', Journal of Virology, 86, pp. 3219 - 3229, http://dx.doi.org/10.1128/JVI.06712-11

McElroy KE; Luciani F; Thomas T, 2012, 'GemSIM: General, Error-Model based SIMulator of next-generation sequencing data', BMC Genomics, 13, pp. 1 - 9, http://dx.doi.org/10.1186/1471-2164-13-74

Luciani F; Bull RA; Lloyd AR; Bull , 2012, 'Next generation deep sequencing and vaccine design: Today and tomorrow', Trends in Biotechnology, 30, pp. 443 - 452, http://dx.doi.org/10.1016/j.tibtech.2012.05.005

Bartuli FN; Luciani F; Caddeo F; Panetta V; Nisi A; Cecchetti F; Arcuri C, 2011, 'Biopsy of oral cavity: A retrospective study 10 years', International Journal of Clinical Dentistry, 4, pp. 329 - 341

McElroy K; Luciani F; Hui J; Rice S; Thomas T, 2011, 'Bacteriophage evolution drives Pseudomonas aeruginosa PAO1 biofilm diversification', BMC Bioinformatics, 12, pp. A2 - A2

Samuel A; Regoes RR; Luciani F, 2011, 'Epidemiological and clinical consequences of within-host evolution.', Trends in Microbiology, 19, pp. 24 - 32

Bull RA; Luciani F; McElroy K; Gaudieri S; Pham ST; Chopra A; Cameron B; Maher L; Dore GJ; White PA; Lloyd AR, 2011, 'Sequential Bottlenecks Drive Viral Evolution in Early Acute Hepatitis C Virus Infection', PLoS Pathog, 7, pp. e1002243, http://dx.doi.org/10.1371/journal.ppat.1002243

Cecchetti F; Luciani F; Serafico L; Bartuli FN; Arcuri C, 2010, 'Floor of the mouth's lipoma: A retrospective study ten years', International Journal of Clinical Dentistry, 3, pp. 111 - 120

Mclean A; Luciani F; Tanaka M, 2010, 'Trade-offs in resource allocation in the intracellular life-cycle of hepatitis C virus', Journal of Theoretical Biology, 267, pp. 565 - 572, http://dx.doi.org/10.1016/j.jtbi.2010.09.031

Luciani F; Sisson SA; Jiang H; Francis AR; Tanaka M, 2009, 'The epidemiological fitness cost of drug resistance in Mycobacterium tuberculosis', Proceedings of the National Academy of Sciences of the United States of America, 106, pp. 14711 - 14715, http://dx.doi.org/10.1073/pnas.0902437106

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