Select Publications

Journal articles

Chin V; Stone E; Havryk A; Plit M; Mccloy R; Murphy A; Field A; Watkins N; Powell J, 2021, 'P60.01 Single-Cell Transcriptomics to Assess Response to Immunotherapy in Advanced Lung Cancer ex-vivo: Developing a Functional Predictive Assay', Journal of Thoracic Oncology, 16, pp. S540 - S541, http://dx.doi.org/10.1016/j.jtho.2021.01.960

Kott KA; Vernon ST; Hansen T; de Dreu M; Das SK; Powell J; de St Groth BF; Di Bartolo BA; McGuire HM; Figtree GA, 2020, 'Single-cell immune profiling in coronary artery disease: The role of state-of-the-art immunophenotyping with mass cytometry in the diagnosis of atherosclerosis', Journal of the American Heart Association, 9, http://dx.doi.org/10.1161/JAHA.120.017759

Cobos FA; Alquicira-Hernandez J; Powell JE; Mestdagh P; De Preter K, 2020, 'Author Correction: Benchmarking of cell type deconvolution pipelines for transcriptomics data (Nature Communications, (2020), 11, 1, (5650), 10.1038/s41467-020-19015-1)', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-20288-9

Avila Cobos F; Alquicira-Hernandez J; Powell JE; Mestdagh P; De Preter K, 2020, 'Benchmarking of cell type deconvolution pipelines for transcriptomics data', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-19015-1

Pinese M; Lacaze P; Rath EM; Stone A; Brion MJ; Ameur A; Nagpal S; Puttick C; Husson S; Degrave D; Cristina TN; Kahl VFS; Statham AL; Woods RL; McNeil JJ; Riaz M; Barr M; Nelson MR; Reid CM; Murray AM; Shah RC; Wolfe R; Atkins JR; Fitzsimmons C; Cairns HM; Green MJ; Carr VJ; Cowley MJ; Pickett HA; James PA; Powell JE; Kaplan W; Gibson G; Gyllensten U; Cairns MJ; McNamara M; Dinger ME; Thomas DM, 2020, 'The Medical Genome Reference Bank contains whole genome and phenotype data of 2570 healthy elderly', Nature Communications, 11, pp. 435, http://dx.doi.org/10.1038/s41467-019-14079-0

Ogger PP; Albers GJ; Hewitt RJ; O’Sullivan BJ; Powell JE; Calamita E; Ghai P; Walker SA; McErlean P; Saunders P; Kingston S; Molyneaux PL; Halket JM; Gray R; Chambers DC; Maher TM; Lloyd CM; Byrne AJ, 2020, 'Itaconate controls the severity of pulmonary fibrosis', Science Immunology, 5, http://dx.doi.org/10.1126/SCIIMMUNOL.ABC1884

Wu SZ; Roden DL; Wang C; Holliday H; Harvey K; Cazet AS; Murphy KJ; Pereira B; Al-Eryani G; Bartonicek N; Hou R; Torpy JR; Junankar S; Chan CL; Lam CE; Hui MN; Gluch L; Beith J; Parker A; Robbins E; Segara D; Mak C; Cooper C; Warrier S; Forrest A; Powell J; O'Toole S; Cox TR; Timpson P; Lim E; Liu XS; Swarbrick A, 2020, 'Stromal cell diversity associated with immune evasion in human triple-negative breast cancer', EMBO Journal, 39, pp. e104063, http://dx.doi.org/10.15252/embj.2019104063

Hammerschlag AR; Byrne EM; Agbessi M; Ahsan H; Alves I; Andiappan A; Arindrarto W; Awadalla P; Battle A; Beutner F; Bonder MJ; Boomsma DI; Christiansen M; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib SA; Gibson G; Heijmans BT; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg-Guzman J; Kukushkina V; Kutalik Z; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Mei H; Milani L; Montgomery GW; Müller-Nurasyid M; Nauck M; Nivard M; Penninx B; Perola M; Pervjakova N; Pierce BL; Powell J; Prokisch H; Psaty BM; Raitakari OT; Ripatti S; Rotzschke O; Rüeger S; Saha A; Scholz M; Schramm K; Seppälä I; Slagboom EP; Stehouwer CDA; Stumvoll M; Sullivan P; ‘t Hoen PAC; Teumer A; Thiery J; Tong L; Tönjes A; van Dongen J; van Iterson M; van Meurs J; Veldink JH; Verlouw J; Visscher PM; Völker U; Võsa U; Westra HJ; Wijmenga C; Yaghootkar H; Yang J; Zeng B; Zhang F; Isaacs A; Pool R; Hottenga JJ; van Greevenbroek MM; van der Kallen CJH; Schalkwijk CG; Zhernakova S; Tigchelaar EF; Beekman M; Deelen J; van Heemst D; van den Berg LH; van Duijn CM; Hofman BA; Uitterlinden AG; Jhamai PM; Verbiest M, 2020, 'Refining Attention-Deficit/Hyperactivity Disorder and Autism Spectrum Disorder Genetic Loci by Integrating Summary Data From Genome-wide Association, Gene Expression, and DNA Methylation Studies', Biological Psychiatry, 88, pp. 470 - 479, http://dx.doi.org/10.1016/j.biopsych.2020.05.002

Tucker NR; Chaffin M; Bedi KC; Papangeli I; Akkad A-D; Arduini A; Hayat S; Eraslan G; Muus C; Bhattacharyya RP; Stegmann CM; Margulies KB; Ellinor PT; Powell J, 2020, 'Myocyte Specific Upregulation of ACE2 in Cardiovascular Disease: Implications for SARS-CoV-2 Mediated Myocarditis', Circulation, 142, pp. 708 - 710, http://dx.doi.org/10.1161/circulationaha.120.047911

D'Urso S; Rajbhandari D; Peach E; De Guzman E; Li Q; Medland SE; Gordon SD; Martin NG; Ligthart S; Brown MA; Powell J; McArthur C; Rhodes A; Meyer J; Finfer S; Myburgh J; Blumenthal A; Cohen J; Venkatesh B; Cuellar-Partida G; Evans DM, 2020, 'Septic Shock: A Genomewide Association Study and Polygenic Risk Score Analysis', Twin Research and Human Genetics, 23, pp. 204 - 213, http://dx.doi.org/10.1017/thg.2020.60

Engel JA; Lee HJ; Williams CG; Kuns R; Olver S; Lansink LIM; Soon MSF; Andersen SB; Powell JE; Svensson V; Teichmann SA; Hill GR; Varelias A; Koyama M; Haque A, 2020, 'Single-cell transcriptomics of alloreactive CD4+ T cells over time reveals divergent fates during gut graft-versus-host disease', JCI Insight, 5, http://dx.doi.org/10.1172/jci.insight.137990

Wu S; Roden D; Al-Eryani G; Bartonicek N; Harvey K; Cazet A; Chan C-L; Junankar S; Hui M; Millar E; Beretov J; Horvath L; Joshua A; Stricker P; Wilmott J; Quek C; Long G; Scolyer R; Yeung B; Segara D; Mak C; Warrier S; Powell J; O'Toole S; Lim E; Swarbrick A, 2020, 'Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis', bioRxiv, http://dx.doi.org/10.1101/2020.06.04.135277

Wu S; Roden D; Wang C; Holliday H; Harvey K; Cazet A; Murphy K; Pereira B; Al-Eryani G; Bartonicek N; Hou R; Torpy J; Junankar S; Chan C-L; Lam E; Hui M; Gluch L; Beith J; Parker A; Robbins E; Segara D; Mak C; Cooper C; Warrier S; Forrest A; Powell J; O’Toole S; Cox T; Timpson P; Lim E; Liu S; Swarbrick A, 2020, 'Single-cell analysis reveals diverse stromal subsets associated with immune evasion in triple-negative breast cancer', bioRxiv, http://dx.doi.org/10.1101/2020.06.04.135327

Senabouth A; Andersen S; Shi Q; Shi L; Jiang F; Zhang W; Wing K; Daniszewski M; Lukowski SW; Hung SSC; Nguyen Q; Fink L; Beckhouse A; Pébay A; Hewitt AW; Powell JE, 2020, 'Comparative performance of the BGI and Illumina sequencing technology for single-cell RNA-sequencing', NAR Genomics and Bioinformatics, 2, http://dx.doi.org/10.1093/nargab/lqaa034

Ziegler CGK; Allon SJ; Nyquist SK; Mbano IM; Miao VN; Tzouanas CN; Cao Y; Yousif AS; Bals J; Hauser BM; Feldman J; Muus C; Wadsworth MH; Kazer SW; Hughes TK; Doran B; Gatter GJ; Vukovic M; Taliaferro F; Mead BE; Guo Z; Wang JP; Gras D; Plaisant M; Ansari M; Angelidis I; Adler H; Sucre JMS; Taylor CJ; Lin B; Waghray A; Mitsialis V; Dwyer DF; Buchheit KM; Boyce JA; Barrett NA; Laidlaw TM; Carroll SL; Colonna L; Tkachev V; Peterson CW; Yu A; Zheng HB; Gideon HP; Winchell CG; Lin PL; Bingle CD; Snapper SB; Kropski JA; Theis FJ; Schiller HB; Zaragosi LE; Barbry P; Leslie A; Kiem HP; Flynn JAL; Fortune SM; Berger B; Finberg RW; Kean LS; Garber M; Schmidt AG; Lingwood D; Shalek AK; Ordovas-Montanes J; Banovich N; Brazma A; Desai T; Duong TE; Eickelberg O; Falk C; Farzan M; Glass I; Haniffa M; Horvath P; Hung D; Kaminski N; Krasnow M; Kuhnemund M; Lafyatis R; Lee H; Leroy S; Linnarson S; Lundeberg J; Meyer K; Misharin A; Nawijn M; Nikolic MZ; Pe'er D; Powell J; Quake S; Rajagopal J; Tata PR; Rawlins EL; Regev A; Reyfman PA; Rojas M; Rosen O; Saeb-Parsy K; Samakovlis C, 2020, 'SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues', Cell, 181, pp. 1016 - 1035.e19, http://dx.doi.org/10.1016/j.cell.2020.04.035

Sungnak W; Huang N; Bécavin C; Berg M; Queen R; Litvinukova M; Talavera-López C; Maatz H; Reichart D; Sampaziotis F; Worlock KB; Yoshida M; Barnes JL; Banovich NE; Barbry P; Brazma A; Collin J; Desai TJ; Duong TE; Eickelberg O; Falk C; Farzan M; Glass I; Gupta RK; Haniffa M; Horvath P; Hubner N; Hung D; Kaminski N; Krasnow M; Kropski JA; Kuhnemund M; Lako M; Lee H; Leroy S; Linnarson S; Lundeberg J; Meyer KB; Miao Z; Misharin AV; Nawijn MC; Nikolic MZ; Noseda M; Ordovas-Montanes J; Oudit GY; Pe’er D; Powell J; Quake S; Rajagopal J; Tata PR; Rawlins EL; Regev A; Reyfman PA; Rozenblatt-Rosen O; Saeb-Parsy K; Samakovlis C; Schiller HB; Schultze JL; Seibold MA; Seidman CE; Seidman JG; Shalek AK; Shepherd D; Spence J; Spira A; Sun X; Teichmann SA; Theis FJ; Tsankov AM; Vallier L; van den Berge M; Whitsett J; Xavier R; Xu Y; Zaragosi LE; Zerti D; Zhang H; Zhang K; Rojas M; Figueiredo F, 2020, 'SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes', Nature Medicine, 26, pp. 681 - 687, http://dx.doi.org/10.1038/s41591-020-0868-6

Byrne AJ; Powell JE; O’Sullivan BJ; Ogger PP; Hoffland A; Cook J; Bonner KL; Hewitt RJ; Wolf S; Ghai P; Walker SA; Lukowski SW; Molyneaux PL; Saglani S; Chambers DC; Maher TM; Lloyd CM, 2020, 'Dynamics of human monocytes and airway macrophages during healthy aging and after transplant', Journal of Experimental Medicine, 217, http://dx.doi.org/10.1084/jem.20191236

van der Wijst MGP; de Vries DH; Groot HE; Trynka G; Hon CC; Bonder MJ; Stegle O; Nawijn MC; Idaghdour Y; van der Harst P; Ye CJ; Powell J; Theis FJ; Mahfouz A; Heinig M; Franke L, 2020, 'The single-cell eQTLGen consortium', eLife, 9, http://dx.doi.org/10.7554/eLife.52155

Xu J; Falconer C; Nguyen Q; Crawford J; McKinnon BD; Mortlock S; Senabouth A; Andersen S; Chiu HS; Jiang L; Palpant NJ; Yang J; Mueller MD; Hewitt AW; Pébay A; Montgomery GW; Powell JE; Coin LJM, 2019, 'Genotype-free demultiplexing of pooled single-cell RNA-seq', Genome Biology, 20, http://dx.doi.org/10.1186/s13059-019-1852-7

Alquicira-Hernandez J; Sathe A; Ji HP; Nguyen Q; Powell JE, 2019, 'ScPred: Accurate supervised method for cell-type classification from single-cell RNA-seq data', Genome Biology, 20, http://dx.doi.org/10.1186/s13059-019-1862-5

Porcu E; Rüeger S; Lepik K; Agbessi M; Ahsan H; Alves I; Andiappan A; Arindrarto W; Awadalla P; Battle A; Beutner F; Bonder MJ; Boomsma DI; Christiansen M; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib SA; Gibson G; Heijmans BT; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg-Guzman J; Kukushkina V; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Mei H; Milani L; Montgomery GW; Müller-Nurasyid M; Nauck M; Nivard M; Penninx B; Perola M; Pervjakova N; Pierce BL; Powell J; Prokisch H; Psaty BM; Raitakari OT; Ripatti S; Rotzschke O; Saha A; Scholz M; Schramm K; Seppälä I; Slagboom EP; Stehouwer CDA; Stumvoll M; Sullivan P; ‘t Hoen PAC; Teumer A; Thiery J; Tong L; Tönjes A; van Dongen J; van Iterson M; van Meurs J; Veldink JH; Verlouw J; Visscher PM; Völker U; Võsa U; Westra HJ; Wijmenga C; Yaghootkar H; Yang J; Zeng B; Zhang F; Beekman M; Bot J; Deelen J; Hofman BA; Hottenga JJ; Isaacs A; Jhamai PM; Jansen R; Kielbasa SM; Lakenberg N; Luijk R; Mei H; Moed M; Nooren I, 2019, 'Mendelian randomization integrating GWAS and eQTL data reveals genetic determinants of complex and clinical traits', Nature Communications, 10, http://dx.doi.org/10.1038/s41467-019-10936-0

Lukowski SW; Lo CY; Sharov AA; Nguyen Q; Fang L; Hung SSC; Zhu L; Zhang T; Grünert U; Nguyen T; Senabouth A; Jabbari JS; Welby E; Sowden JC; Waugh HS; Mackey A; Pollock G; Lamb TD; Wang PY; Hewitt AW; Gillies MC; Powell JE; Wong RCB, 2019, 'A single-cell transcriptome atlas of the adult human retina', EMBO Journal, 38, http://dx.doi.org/10.15252/embj.2018100811

Wang H; Zhang F; Zeng J; Wu Y; Kemper KE; Xue A; Zhang M; Powell JE; Goddard ME; Wray NR; Visscher PM; McRae AF; Yang J, 2019, 'Genotype-by-environment interactions inferred from genetic effects on phenotypic variability in the UK Biobank', Science Advances, 5, http://dx.doi.org/10.1126/sciadv.aaw3538

Senabouth A; Lukowski SW; Hernandez JA; Andersen SB; Mei X; Nguyen QH; Powell JE, 2019, 'Ascend: R package for analysis of single-cell RNA-seq data', GigaScience, 8, http://dx.doi.org/10.1093/gigascience/giz087

Zeng B; Lloyd-Jones LR; Montgomery GW; Metspalu A; Esko T; Franke L; Vosa U; Claringbould A; Brigham KL; Quyyumi AA; Idaghdour Y; Yang J; Visscher PM; Powell JE; Gibson G, 2019, 'Comprehensive multiple eQTL detection and its application to GWAS interpretation', Genetics, 212, pp. 905 - 918, http://dx.doi.org/10.1534/genetics.119.302091

Lukowski SW; Patel J; Andersen SB; Sim SL; Wong HY; Tay J; Winkler I; Powell JE; Khosrotehrani K, 2019, 'Single-Cell Transcriptional Profiling of Aortic Endothelium Identifies a Hierarchy from Endovascular Progenitors to Differentiated Cells', Cell Reports, 27, pp. 2748 - 2758.e3, http://dx.doi.org/10.1016/j.celrep.2019.04.102

Karlsson Linnér R; Biroli P; Kong E; Meddens SFW; Wedow R; Fontana MA; Lebreton M; Tino SP; Abdellaoui A; Hammerschlag AR; Nivard MG; Okbay A; Rietveld CA; Timshel PN; Trzaskowski M; Vlaming RD; Zünd CL; Bao Y; Buzdugan L; Caplin AH; Chen CY; Eibich P; Fontanillas P; Gonzalez JR; Joshi PK; Karhunen V; Kleinman A; Levin RZ; Lill CM; Meddens GA; Muntané G; Sanchez-Roige S; Rooij FJV; Taskesen E; Wu Y; Zhang F; Agee M; Alipanahi B; Bell RK; Bryc K; Elson SL; Furlotte NA; Huber KE; Litterman NK; McCreight JC; McIntyre MH; Mountain JL; Northover CAM; Pitts SJ; Sathirapongsasuti JF; Sazonova OV; Shelton JF; Shringarpure S; Tian C; Tung JY; Vacic V; Wilson CH; Agbessi M; Ahsan H; Alves I; Andiappan A; Awadalla P; Battle A; Beutner F; Jan Bonder M; Boomsma DI; Christiansen M; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib SA; Gibson G; Heijmans B; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg-Guzman J; Kukushkina V; Kutalik Z; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Metspalu A; Milani L; Montgomery GW; Müller-Nurasyid M; Nauck M; Penninx B; Perola M, 2019, 'Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences', Nature Genetics, 51, pp. 245 - 257, http://dx.doi.org/10.1038/s41588-018-0309-3

Timmers PRHJ; Mounier N; Lall K; Fischer K; Ning Z; Feng X; Bretherick AD; Clark DW; Shen X; Esko T; Kutalik Z; Wilson JF; Joshi PK, 2019, 'Genomics of 1 million parent lifespans implicates novel pathways and common diseases and distinguishes survival chances', eLife, 8, pp. 1 - 40, http://dx.doi.org/10.7554/elife.39856

Chambers DC; Carew AM; Lukowski SW; Powell JE, 2019, 'Transcriptomics and single-cell RNA-sequencing', Respirology, 24, pp. 29 - 36, http://dx.doi.org/10.1111/resp.13412

O'Sullivan B; Powell J; Lukowski S; Tan M; Hopkins P; Chambers D, 2019, 'Reconstruction of Transcriptional Programs of Monocyte to Macrophage Sequential Cell Fate Transition Using Single Cell RNA Sequencing in Sex Mis-Matched Lung Transplantation', The Journal of Heart and Lung Transplantation, 38, pp. S157 - S157, http://dx.doi.org/10.1016/j.healun.2019.01.375

Daniszewski M; Senabouth A; Nguyen QH; Crombie DE; Lukowski SW; Kulkarni T; Sluch VM; Jabbari JS; Chamling X; Zack DJ; Pébay A; Powell JE; Hewitt AW, 2018, 'Single cell RNA sequencing of stem cell-derived retinal ganglion cells', Scientific Data, 5, http://dx.doi.org/10.1038/sdata.2018.13

Lukowski SW; Tuong ZK; Noske K; Senabouth A; Nguyen QH; Andersen SB; Soyer HP; Frazer IH; Powell JE, 2018, 'Detection of HPV E7 Transcription at Single-Cell Resolution in Epidermis', Journal of Investigative Dermatology, 138, pp. 2558 - 2567, http://dx.doi.org/10.1016/j.jid.2018.06.169

Fung JN; Mortlock S; Girling JE; Holdsworth-Carson SJ; Teh WT; Zhu Z; Lukowski SW; McKinnon BD; McRae A; Yang J; Healey M; Powell JE; Rogers PAW; Montgomery GW, 2018, 'Genetic regulation of disease risk and endometrial gene expression highlights potential target genes for endometriosis and polycystic ovarian syndrome', Scientific Reports, 8, http://dx.doi.org/10.1038/s41598-018-29462-y

Xue A; Wu Y; Zhu Z; Zhang F; Kemper KE; Zheng Z; Yengo L; Lloyd-Jones LR; Sidorenko J; Wu Y; Agbessi M; Ahsan H; Alves I; Andiappan A; Awadalla P; Battle A; Beutner F; Bonder MJ; Boomsma D; Christiansen M; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib S; Gibson G; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg-Guzman J; Kukushkina V; Kutalik Z; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Metspalu A; Milani L; Müller-Nurasyid M; Nauck M; Nivard M; Penninx B; Perola M; Pervjakova N; Pierce B; Powell J; Prokisch H; Psaty B; Raitakari O; Ring S; Ripatti S; Rotzschke O; Ruëger S; Saha A; Scholz M; Schramm K; Seppälä I; Stumvoll M; Sullivan P; Teumer A; Thiery J; Tong L; Tönjes A; van Dongen J; van Meurs J; Verlouw J; Völker U; Võsa U; Yaghootkar H; Zeng B; McRae AF; Visscher PM; Zeng J; Yang J, 2018, 'Genome-wide association analyses identify 143 risk variants and putative regulatory mechanisms for type 2 diabetes', Nature Communications, 9, http://dx.doi.org/10.1038/s41467-018-04951-w

McRae AF; Marioni RE; Shah S; Yang J; Powell JE; Harris SE; Gibson J; Henders AK; Bowdler L; Painter JN; Murphy L; Martin NG; Starr JM; Wray NR; Deary IJ; Visscher PM; Montgomery GW, 2018, 'Identification of 55,000 Replicated DNA Methylation QTL', Scientific Reports, 8, http://dx.doi.org/10.1038/s41598-018-35871-w

Qi T; Wu Y; Zeng J; Zhang F; Xue A; Jiang L; Zhu Z; Kemper K; Yengo L; Zheng Z; Agbessi M; Ahsan H; Alves I; Andiappan A; Awadalla P; Battle A; Beutner F; Jan Bonder M; Boomsma D; Christiansen M; Claringbould A; Deelen P; Esko T; Favé MJ; Franke L; Frayling T; Gharib S; Gibson G; Hemani G; Jansen R; Kähönen M; Kalnapenkis A; Kasela S; Kettunen J; Kim Y; Kirsten H; Kovacs P; Krohn K; Kronberg-Guzman J; Kukushkina V; Kutalik Z; Lee B; Lehtimäki T; Loeffler M; Marigorta UM; Metspalu A; Milani L; Müller-Nurasyid M; Nauck M; Nivard M; Penninx B; Perola M; Pervjakova N; Pierce B; Powell J; Prokisch H; Psaty B; Raitakari O; Ring S; Ripatti S; Rotzschke O; Ruëger S; Saha A; Scholz M; Schramm K; Seppälä I; Stumvoll M; Sullivan P; Teumer A; Thiery J; Tong L; Tönjes A; Van Dongen J; Van Meurs J; Verlouw J; Völker U; Võsa U; Yaghootkar H; Zeng B; Marioni RE; Montgomery GW; Deary IJ; Wray NR; Visscher PM; McRae AF; Yang J, 2018, 'Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood', Nature Communications, 9, http://dx.doi.org/10.1038/s41467-018-04558-1

Pinese M; Lacaze P; Rath E; Stone A; Brion M-J; Ameur A; Nagpal S; Puttick C; Husson S; Degrave D; Navin Cristina T; Silva Kahl V; Statham A; Woods R; McNeil J; Riaz M; Barr M; Nelson M; Reid C; Murray A; Shah R; Wolfe R; Atkins J; Fitzsimmons C; Cairns H; Green M; Carr V; Cowley M; Pickett H; James P; Powell J; Kaplan W; Gibson G; Gyllensten U; Cairns M; McNamara M; Dinger M; Thomas D, 2018, 'The Medical Genome Reference Bank: Whole genomes and phenotype of 2,570 healthy elderly', bioRxiv, pp. 473348, http://dx.doi.org/10.1101/473348

Friedman CE; Nguyen Q; Lukowski SW; Helfer A; Chiu HS; Miklas J; Levy S; Suo S; Han JDJ; Osteil P; Peng G; Jing N; Baillie GJ; Senabouth A; Christ AN; Bruxner TJ; Murry CE; Wong ES; Ding J; Wang Y; Hudson J; Ruohola-Baker H; Bar-Joseph Z; Tam PPL; Powell JE; Palpant NJ, 2018, 'Single-Cell Transcriptomic Analysis of Cardiac Differentiation from Human PSCs Reveals HOPX-Dependent Cardiomyocyte Maturation', Cell Stem Cell, 23, pp. 586 - 598.e8, http://dx.doi.org/10.1016/j.stem.2018.09.009

Daniszewski M; Nguyen Q; Chy HS; Singh V; Crombie DE; Kulkarni T; Liang HH; Sivakumaran P; Lidgerwood GE; Hernández D; Conquest A; Rooney LA; Chevalier S; Andersen SB; Senabouth A; Vickers JC; Mackey DA; Craig JE; Laslett AL; Hewitt AW; Powell JE; Pébay A, 2018, 'Single-Cell Profiling Identifies Key Pathways Expressed by iPSCs Cultured in Different Commercial Media', iScience, 7, pp. 30 - 39, http://dx.doi.org/10.1016/j.isci.2018.08.016

Yap CX; Lloyd-Jones L; Holloway A; Smartt P; Wray NR; Gratten J; Powell JE, 2018, 'Trans-eQTLs identified in whole blood have limited influence on complex disease biology', European Journal of Human Genetics, 26, pp. 1361 - 1368, http://dx.doi.org/10.1038/s41431-018-0174-7

MacGregor S; Ong JS; An J; Han X; Zhou T; Siggs OM; Law MH; Souzeau E; Sharma S; Lynn DJ; Beesley J; Sheldrick B; Mills RA; Landers J; Ruddle JB; Graham SL; Healey PR; White AJR; Casson RJ; Best S; Grigg JR; Goldberg I; Powell JE; Whiteman DC; Radford-Smith GL; Martin NG; Montgomery GW; Burdon KP; Mackey DA; Gharahkhani P; Craig JE; Hewitt AW, 2018, 'Genome-wide association study of intraocular pressure uncovers new pathways to glaucoma', Nature Genetics, 50, pp. 1067 - 1071, http://dx.doi.org/10.1038/s41588-018-0176-y

Ramnath D; Irvine KM; Lukowski SW; Horsfall LU; Loh Z; Clouston AD; Patel PJ; Fagan KJ; Iyer A; Lampe G; Stow JL; Schroder K; Fairlie DP; Powell JE; Powell EE; Sweet MJ, 2018, 'Hepatic expression profiling identifies steatosis-independent and steatosis-driven advanced fibrosis genes', JCI insight, 3, http://dx.doi.org/10.1172/jci.insight.120274

De Smit E; Lukowski SW; Anderson L; Senabouth A; Dauyey K; Song S; Wyse B; Wheeler L; Chen CY; Cao K; Wong Ten Yuen A; Shuey N; Clarke L; Lopez Sanchez I; Hung SSC; Pébay A; Mackey DA; Brown MA; Hewitt AW; Powell JE, 2018, 'Longitudinal expression profiling of CD4+ and CD8+ cells in patients with active to quiescent giant cell arteritis', BMC Medical Genomics, 11, http://dx.doi.org/10.1186/s12920-018-0376-4

Nguyen QH; Lukowski SW; Chiu HS; Senabouth A; Bruxner TJC; Christ AN; Palpant NJ; Powell JE, 2018, 'Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations', Genome Research, 28, pp. 1053 - 1066, http://dx.doi.org/10.1101/gr.223925.117

Wray NR; Ripke S; Mattheisen M; Trzaskowski M; Byrne EM; Abdellaoui A; Adams MJ; Agerbo E; Air TM; Andlauer TMF; Bacanu SA; Bækvad-Hansen M; Beekman AFT; Bigdeli TB; Binder EB; Blackwood DRH; Bryois J; Buttenschøn HN; Bybjerg-Grauholm J; Cai N; Castelao E; Christensen JH; Clarke TK; Coleman JIR; Colodro-Conde L; Couvy-Duchesne B; Craddock N; Crawford GE; Crowley CA; Dashti HS; Davies G; Deary IJ; Degenhardt F; Derks EM; DIrek N; Dolan CV; Dunn EC; Eley TC; Eriksson N; Escott-Price V; Kiadeh FHF; Finucane HK; Forstner AJ; Frank J; Gaspar HA; Gill M; Giusti-Rodríguez P; Goes FS; Gordon SD; Grove J; Hall LS; Hannon E; Hansen CS; Hansen TF; Herms S; Hickie IB; Hoffmann P; Homuth G; Horn C; Hottenga JJ; Hougaard DM; Hu M; Hyde CL; Ising M; Jansen R; Jin F; Jorgenson E; Knowles JA; Kohane IS; Kraft J; Kretzschmar WW; Krogh J; Kutalik Z; Lane JM; Li Y; Li Y; Lind PA; Liu X; Lu L; MacIntyre DJ; MacKinnon DF; Maier RM; Maier W; Marchini J; Mbarek H; McGrath P; McGuffin P; Medland SE; Mehta D; Middeldorp CM; Mihailov E; Milaneschi Y; Milani L; Mill J; Mondimore FM; Montgomery GW; Mostafavi S; Mullins N; Nauck M; Ng B, 2018, 'Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression', Nature Genetics, 50, pp. 668 - 681, http://dx.doi.org/10.1038/s41588-018-0090-3

Zeng J; De Vlaming R; Wu Y; Robinson MR; Lloyd-Jones LR; Yengo L; Yap CX; Xue A; Sidorenko J; McRae AF; Powell JE; Montgomery GW; Metspalu A; Esko T; Gibson G; Wray NR; Visscher PM; Yang J, 2018, 'Signatures of negative selection in the genetic architecture of human complex traits', Nature Genetics, 50, pp. 746 - 753, http://dx.doi.org/10.1038/s41588-018-0101-4

Gerring ZF; Powell JE; Montgomery GW; Nyholt DR, 2018, 'Genome-wide analysis of blood gene expression in migraine implicates immune-inflammatory pathways', Cephalalgia, 38, pp. 292 - 303, http://dx.doi.org/10.1177/0333102416686769

Qiao Z; Powell JE; Evans DM, 2018, 'MHC-dependent mate selection within 872 spousal pairs of european ancestry from the Health and Retirement Study', Genes, 9, http://dx.doi.org/10.3390/genes9010053

Lukowski SW; Lloyd-Jones LR; Holloway A; Kirsten H; Hemani G; Yang J; Small K; Zhao J; Metspalu A; Dermitzakis ET; Gibson G; Spector TD; Thiery J; Scholz M; Montgomery GW; Esko T; Visscher PM; Powell JE, 2017, 'Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood', Nature Communications, 8, http://dx.doi.org/10.1038/s41467-017-00473-z

Robins C; McRae AF; Powell JE; Wiener HW; Aslibekyan S; Kennedy EM; Absher DM; Arnett DK; Montgomery GW; Visscher PM; Cutler DJ; Conneely KN, 2017, 'Testing two evolutionary theories of human aging with DNA methylation data', Genetics, 207, pp. 1547 - 1560, http://dx.doi.org/10.1534/genetics.117.300217


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