Select Publications

Journal articles

Padmawati RS; Heywood A; Sitaresmi MN; Atthobari J; MacIntyre CR; Soenarto Y; Seale H, 2019, 'Religious and community leaders' acceptance of rotavirus vaccine introduction in Yogyakarta, Indonesia: A qualitative study', BMC Public Health, 19, http://dx.doi.org/10.1186/s12889-019-6706-4

Joshi A; Karim S; Sparks R; Paris C; MacIntyre R, 2019, 'Survey of Text-based Epidemic Intelligence: A Computational Linguistic Perspective', ACM Computing Surveys

Zhang EJ; Chughtai AA; Heywood A; MacIntyre CR, 2019, 'Influence of political and medical leaders on parental perception of vaccination: A cross-sectional survey in Australia', BMJ Open, 9, pp. e025866, http://dx.doi.org/10.1136/bmjopen-2018-025866

Kulkarni SV; Narain JP; Gupta S; Dhariwal AC; Singh SK; Macintyre CR, 2019, 'Influenza a (H1N1) in India: Changing epidemiology and its implications', National Medical Journal of India, 32, pp. 107 - 108, http://dx.doi.org/10.4103/0970-258X.253355

MacIntyre R; Valentina C; Biswajit M; Devina N; Mohana Priya K; David H; Costantino V; Heslop D; Kunasekaran M, 2019, 'Epidemic size, duration and vaccine stockpiling following a large-scale attack with smallpox', Global Biosecurity, 1, pp. 74 - 81, http://dx.doi.org/10.31646/gbio.13

David H; MacIntyre R, 2019, 'Germ line genome editing and the emerging struggle for supremacy in the Chemical, Biological and Radiological (CBR) balance of power', Global Biosecurity, 1, pp. 169 - 173, http://dx.doi.org/10.31646/gbio.18

Sparks R; Jin B; Karimi S; Paris C; MacIntyre CR, 2019, 'Real-time monitoring of events applied to syndromic surveillance', Quality Engineering, 31, pp. 73 - 90, http://dx.doi.org/10.1080/08982112.2018.1537443

Sparks R; Jin B; Karimi S; Paris C; MacIntyre CR, 2019, 'Rejoinder', Quality Engineering, 31, pp. 105 - 107, http://dx.doi.org/10.1080/08982112.2018.1547831

Joshi A; Karimi S; Sparks R; Paris C; MacIntyre CR, 2019, 'A Comparison of Word-based and Context-based Representations for Classification Problems in Health Informatics', SIGBIOMED WORKSHOP ON BIOMEDICAL NATURAL LANGUAGE PROCESSING (BIONLP 2019), pp. 135 - 141, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000521946800015&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

MacIntyre R; Heslop D; Nand D; Schramm C; Butel M; Rawlinson W; Baker M; Kiedrzynski T; Nelson C; Fotualii L; Yeo K; Elsgaard J; Fonua L; Lane M, 2019, 'Exercise Mataika: White Paper on response to a smallpox bioterrorism release in the Pacific', Journal of Global Biosecurity, 1, pp. 91, http://dx.doi.org/10.31646/gbio.10

Moa AM; Adam DC; MacIntyre CR, 2019, 'Inter-seasonality of influenza in Australia', Influenza and other Respiratory Viruses, 13, pp. 459 - 464, http://dx.doi.org/10.1111/irv.12642

Sulaiman FB; Yanti NKS; Lesmanawati DAS; Trent M; Macintyre CR; Chughtai AA, 2019, 'Language-specific gaps in identifying early epidemic signals – a case study of the Malay language', Global Biosecurity, 1, http://dx.doi.org/10.31646/gbio.33

Jayasundara D; Hui BB; Regan DG; Heywood AE; MacIntyre CR; Wood JG, 2019, 'Modelling the decline and future of hepatitis A transmission in Australia', Journal of Viral Hepatitis, 26, pp. 199 - 207, http://dx.doi.org/10.1111/jvh.13018

Dirmesropian S; Liu B; Wood JG; MacIntyre CR; McIntyre P; Karki S; Jayasinghe S; Newall AT, 2019, 'Pneumonia hospitalisation and case-fatality rates in older australians with and without risk factors for pneumococcal disease: Implications for vaccine policy', Epidemiology and Infection, 147, http://dx.doi.org/10.1017/S0950268818003473

Raina Macintyre C; Doolan C; De Silva C, 2019, 'The explosion at Vector: hoping for the best while preparing for the worst', Global Biosecurity, 1, http://dx.doi.org/10.31646/gbio.41

Bhat A; Khanna S; Chen H; Gan G; MacIntyre R; Tan T, 2019, 'Comparison of Echocardiographic Parameters of Left Atrial and Ventricular Function between Young Stroke vs Lone Atrial Fibrillation vs Healthy Controls', Heart, Lung and Circulation, 28, pp. S242 - S242, http://dx.doi.org/10.1016/j.hlc.2019.06.255

Kunasekaran M; Chen X; Costantino V; Chughtai A; MacIntyre R, 2019, 'Evidence for Residual Immunity to Smallpox After Vaccination', Prehospital and Disaster Medicine, 34, pp. s129 - s129, http://dx.doi.org/10.1017/s1049023x19002802

Thangarajah M; Gan G; Tan T; Porter R; MacIntyre R; Hitchen E, 2019, 'Incidence of Viral Infections as a Cause of Acute Decompensation of Heart Failure and the Prevalence of Viral Testing in a Tertiary Referral Centre', Heart, Lung and Circulation, 28, pp. S176 - S176, http://dx.doi.org/10.1016/j.hlc.2019.06.099

Kunasekaran M; Trent M; Lai E; Tan H; Chughtai A; Poulos C; MacIntyre R, 2019, 'Influenza Vaccine Uptake and Associated Factors in Aged Care Facilities', Prehospital and Disaster Medicine, 34, pp. s140 - s140, http://dx.doi.org/10.1017/s1049023x19003108

Mahendra Raj S; Chughtai A; Sharma A; Tan T; MacIntyre R, 2019, 'The Impact of Cardiovascular Prevention on the Cost Benefit of Influenza Vaccination for Australian Adults aged 50–64 years old', Heart, Lung and Circulation, 28, pp. S375 - S375, http://dx.doi.org/10.1016/j.hlc.2019.06.562

Thangarajah M; Porter R; MacIntyre R; Tan T, 2019, 'Uptake of Influenza, Pneumococcal and Herpes Zoster Vaccination as a Preventative Strategy for Adverse Cardiovascular Outcomes in a High-Risk Cohort of Patients with Chronic Heart Failure', Heart, Lung and Circulation, 28, pp. S196 - S197, http://dx.doi.org/10.1016/j.hlc.2019.06.147

Chen X; Chughtai A; MacIntyre RAINA, 2018, 'Recalibration of the Grunow-Finke Assessment Tool to Improve Performance in Detecting Unnatural Epidemics', Risk Analysis, http://dx.doi.org/10.1111/risa.13255

MacIntyre CR; Chughtai AA; Barnes M; Ridda I; Seale H; Toms R; Heywood A, 2018, 'The role of pneumonia and secondary bacterial infection in fatal and serious outcomes of pandemic influenza a(H1N1)pdm09', BMC Infectious Diseases, 18, pp. 637, http://dx.doi.org/10.1186/s12879-018-3548-0

MacIntyre CR; Dyda A; Bui CM; Chughtai AA, 2018, 'Author Response to Comments on “Rolling epidemic of Legionnaires’ disease outbreaks in small geographic areas”', Emerging Microbes and Infections, 7, pp. 1 - 3, http://dx.doi.org/10.1038/s41426-018-0150-x

Bui CM; Adam DC; Njoto E; Scotch M; MacIntyre CR, 2018, 'Characterising routes of H5N1 and H7N9 spread in China using Bayesian phylogeographical analysis', Emerging Microbes and Infections, 7, pp. 1 - 8, http://dx.doi.org/10.1038/s41426-018-0185-z

Chughtai AA; Chen X; Macintyre CR, 2018, 'Risk of self-contamination during doffing of personal protective equipment', American Journal of Infection Control, 46, pp. 1329 - 1334, http://dx.doi.org/10.1016/j.ajic.2018.06.003

MacIntyre CR; Dyda A; Bui CM; Chughtai AA, 2018, 'Rolling epidemic of Legionnaires' disease outbreaks in small geographic areas article', Emerging Microbes and Infections, 7, pp. 1 - 10, http://dx.doi.org/10.1038/s41426-018-0051-z

Zhang Y; Muscatello DJ; Wang Q; Yang P; Pan Y; Huo D; Liu Z; Zhao X; Tang Y; Li C; Chughtai AA; Macintyre CR, 2018, 'Hospitalizations for influenza-associatesevere acute respiratory infection, Beijing, China, 2014–2016', Emerging Infectious Diseases, 24, pp. 2098 - 2102, http://dx.doi.org/10.3201/eid2411.171410

Zhang Y; Cao Z; Costantino V; Muscatello DJ; Chughtai AA; Yang P; Wang Q; MacIntyre CR, 2018, 'Influenza illness averted by influenza vaccination among school year children in Beijing, 2013-2016', Influenza and other Respiratory Viruses, 12, pp. 687 - 694, http://dx.doi.org/10.1111/irv.12585

Paudel P; Macintyre CR; Zwar N; Seale H; Worth H; Sheikh M; Heywood AE, 2018, 'Risk activities and pre-travel health seeking practices of notified cases of imported infectious diseases in Australia (vol 24, pg 1, 2017)', JOURNAL OF TRAVEL MEDICINE, 25, http://dx.doi.org/10.1093/jtm/tay089

Chen C; Beutels P; Wood J; Menzies R; MacIntyre CR; McIntyre P; Newall AT, 2018, 'Retrospective cost-effectiveness of the 23-valent pneumococcal polysaccharide vaccination program in Australia', Vaccine, 36, pp. 6307 - 6313, http://dx.doi.org/10.1016/j.vaccine.2018.08.084

Tian Y; Chughtai AA; Gao Z; Yan H; Chen Y; Liu B; Huo D; Jia L; Wang Q; MacIntyre CR, 2018, 'Prevalence and genotypes of group A rotavirus among outpatient children under five years old with diarrhea in Beijing, China, 2011-2016', BMC Infectious Diseases, 18, pp. 497, http://dx.doi.org/10.1186/s12879-018-3411-3

Hii A; Chughtai AA; Housen T; Saketa S; Kunasekaran MP; Sulaiman F; Yanti NS; MacIntyre CR, 2018, 'Epidemic intelligence needs of stakeholders in the Asia-Pacific region', Western Pacific surveillance and response journal : WPSAR, 9, pp. 28 - 36, http://dx.doi.org/10.5365/wpsar.2018.9.2.009

Njoto EN; Scotch M; Bui CM; Adam DC; Chughtai AA; MacIntyre CR, 2018, 'Phylogeography of H5N1 avian influenza virus in Indonesia', Transboundary and Emerging Diseases, 65, pp. 1339 - 1347, http://dx.doi.org/10.1111/tbed.12883

Adam DC; Bui CM; Heywood AE; Kunasekaran M; Sheikh M; Narasimhan P; MacIntyre CR, 2018, 'Adherence to anti-vectorial prevention measures among travellers with chikungunya and malaria returning to Australia: Comparative epidemiology', BMC Research Notes, 11, pp. 590, http://dx.doi.org/10.1186/s13104-018-3695-9

Adam DC; Scotch M; MacIntyre CR, 2018, 'Bayesian Phylogeography and Pathogenic Characterization of Smallpox Based on HA, ATI, and CrmB Genes', Molecular Biology and Evolution, 35, pp. msy153 - msy153, http://dx.doi.org/10.1093/molbev/msy153

Karki S; Muscatello DJ; Banks E; MacIntyre CR; McIntyre P; Liu B, 2018, 'Association between body mass index and laboratory-confirmed influenza in middle aged and older adults: a prospective cohort study', International Journal of Obesity, 42, pp. 1480 - 1488, http://dx.doi.org/10.1038/s41366-018-0029-x

Saha A; Hayen A; Ali M; Rosewell A; MacIntyre CR; Clemens JD; Qadri F, 2018, 'Socioeconomic drivers of vaccine uptake: An analysis of the data of a geographically defined cluster randomized cholera vaccine trial in Bangladesh', Vaccine, 36, pp. 4742 - 4749, http://dx.doi.org/10.1016/j.vaccine.2018.04.084

Dyda A; McIntyre P; Karki S; MacIntyre CR; Newall AT; Banks E; Kaldor J; Liu B, 2018, 'Pertussis vaccination in a cohort of older Australian adults following a cocooning vaccination program', Vaccine, 36, pp. 4157 - 4160, http://dx.doi.org/10.1016/j.vaccine.2018.05.109

Costantino V; Kunasekaran MP; Chughtai AA; MacIntyre CR, 2018, 'How Valid Are Assumptions about Re-emerging Smallpox? A Systematic Review of Parameters Used in Smallpox Mathematical Models', Military Medicine, 183, pp. e200 - e207, http://dx.doi.org/10.1093/milmed/usx092

Raina MacIntyre C; Engells TE; Scotch M; Heslop DJ; Gumel AB; Poste G; Chen X; Herche W; Steinhöfel K; Lim S; Broom A; MacIntyre R, 2018, 'Converging and emerging threats to health security', Environment Systems and Decisions, 38, pp. 198 - 207, http://dx.doi.org/10.1007/s10669-017-9667-0

MacIntyre CR; Katelaris AL; Ridda I; Chughtai AA; Moa A; Barnes M; Kabir M; Bradstock K, 2018, 'The immunogenicity of 7-valent pneumococcal conjugate vaccine (PCV7) in adult bone marrow transplant patients', British Journal of Haematology, 181, pp. 860 - 863, http://dx.doi.org/10.1111/bjh.14725

MacIntyre CR; Costantino V; Chen X; Segelov E; Chughtai AA; Kelleher A; Kunasekaran M; Lane JM, 2018, 'Influence of population immunosuppression and past vaccination on smallpox reemergence', Emerging Infectious Diseases, 24, pp. 646 - 653, http://dx.doi.org/10.3201/eid2404.171233

Iuliano AD; Roguski KM; Chang HH; Muscatello DJ; Palekar R; Tempia S; Cohen C; Gran JM; Schanzer D; Cowling BJ; Wu P; Kyncl J; Ang LW; Park M; Redlberger-Fritz M; Yu H; Espenhain L; Krishnan A; Emukule G; van Asten L; Pereira da Silva S; Aungkulanon S; Buchholz U; Widdowson MA; Bresee JS; Azziz-Baumgartner E; Cheng PY; Dawood F; Foppa I; Olsen S; Haber M; Jeffers C; MacIntyre CR; Newall AT; Wood JG; Kundi M; Popow-Kraupp T; Ahmed M; Rahman M; Marinho F; Sotomayor Proschle CV; Vergara Mallegas N; Luzhao F; Sa L; Barbosa-Ramírez J; Sanchez DM; Gomez LA; Vargas XB; Acosta Herrera AB; Llanés MJ; Fischer TK; Krause TG; Mølbak K; Nielsen J; Trebbien R; Bruno A; Ojeda J; Ramos H; an der Heiden M; del Carmen Castillo Signor L; Serrano CE; Bhardwaj R; Chadha M; Narayan V; Kosen S; Bromberg M; Glatman-Freedman A; Kaufman Z; Arima Y; Oishi K; Chaves S; Nyawanda B; Al-Jarallah RA; Kuri-Morales PA; Matus CR; Corona MEJ; Burmaa A; Darmaa O; Obtel M; Cherkaoui I; van den Wijngaard CC; van der Hoek W; Baker M; Bandaranayake D; Bissielo A; Huang S; Lopez L; Newbern C; Flem E; Grøneng GM; Hauge S; de Cosío FG; de Moltó Y; Castillo LM; Cabello MA; von Horoch M; Medina Osis J; Machado A; Nunes B; Rodrigues AP, 2018, 'Estimates of global seasonal influenza-associated respiratory mortality: a modelling study', The Lancet, 391, pp. 1285 - 1300, http://dx.doi.org/10.1016/S0140-6736(17)33293-2

Ajisegiri WS; Chughtai AA; MacIntyre CR, 2018, 'A Risk Analysis Approach to Prioritizing Epidemics: Ebola Virus Disease in West Africa as a Case Study', Risk Analysis, 38, pp. 429 - 441, http://dx.doi.org/10.1111/risa.12876

Haire BG; Komesaroff PA; Leontini R; MacIntyre CR, 2018, 'Raising Rates of Childhood Vaccination: The Trade-off Between Coercion and Trust', Journal of Bioethical Inquiry, 15, pp. 199 - 209, http://dx.doi.org/10.1007/s11673-018-9841-1

Itzwerth R; Moa A; MacIntyre CR, 2018, 'Australia's influenza pandemic preparedness plans: An analysis', Journal of Public Health Policy, 39, pp. 111 - 124, http://dx.doi.org/10.1057/s41271-017-0109-5

Meyers J; Logaraj M; Balaji R; Narasimhan P; MacIntyre RAINA, 2018, 'Epidemic Varicella Zoster Virus among University Students, India', Emerging Infectious Diseases, http://dx.doi.org/10.3201/eid2402.170659.

Chen C, 2018, 'The role of timeliness in the cost-effectiveness of older adult vaccination: A case study of pneumococcal conjugate vaccine in Australia', Vaccine, http://dx.doi.org/10.1016/j.vaccine.2018.01.052

Dyda A; Stelzer-Braid S; Adam D; Chughtai AA; Macintyre CR, 2018, 'The association between acute flaccid myelitis (AFM) and enterovirus D68 (EV-D68) – what is the evidence for causation?', Eurosurveillance, 23, pp. 17 - 00310, http://dx.doi.org/10.2807/1560-7917.es.2018.23.3.17-00310


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