Select Publications

Book Chapters

MacIntyre R; Chughtai A, 2017, 'Facemasks and Respirators for the Prevention of Infection in Healthcare and Community Settings', in Handbook of Respiratory Protection Safeguarding Against Current and Emerging Hazards, CRC Press, pp. 338 - 375

MacIntyre CR; Wood JG; Watkins R; Gao Z, 2011, 'MODELING IN IMMUNIZATION AND BIOSURVEILLANCE RESEARCH', in Zeng D; Chen H; CastilloChavez C; Lober WB; Thurmond M (ed.), INFECTIOUS DISEASE INFORMATICS AND BIOSURVEILLANCE, edn. Integrated Series in Information Systems, SPRINGER, pp. 259 - 278, http://dx.doi.org/10.1007/978-1-4419-6892-0_12

Williams K; Hayen A; Macintyre CR; Mellis C, 2007, 'Using Evidence To Inform Decisions', in Evidence-Based Pediatrics and Child Health with CD-ROM, pp. 161 - 166, http://dx.doi.org/10.1002/9780470987384.ch17

Journal articles

MacIntyre CR; Ridda I; Trent MJ; McIntyre P, 2019, 'Persistence of immunity to conjugate and polysaccharide pneumococcal vaccines in frail, hospitalised older adults in long-term follow up.', Vaccine, http://dx.doi.org/10.1016/j.vaccine.2019.07.005

MacIntyre CR; Costantino V; Kunasekaran MP, 2019, 'Health system capacity in Sydney, Australia in the event of a biological attack with smallpox', PLoS ONE, vol. 14, http://dx.doi.org/10.1371/journal.pone.0217704

Chughtai AA; Stelzer-Braid S; Rawlinson W; Pontivivo G; Wang Q; Pan Y; Zhang D; Zhang Y; Li L; MacIntyre CR, 2019, 'Contamination by respiratory viruses on outer surface of medical masks used by hospital healthcare workers', BMC Infectious Diseases, vol. 19, http://dx.doi.org/10.1186/s12879-019-4109-x

Barnes CE; MacIntyre CR, 2019, 'Risk modelling the mortality impact of antimicrobial resistance in secondary pneumococcal pneumonia infections during the 2009 influenza pandemic', International Journal of Infectious Diseases, vol. 85, pp. 1 - 6, http://dx.doi.org/10.1016/j.ijid.2019.05.005

Armstrong J; Adam D; Kunasekaran M; MacIntyre R; Nand D; Heslop D, 2019, 'Themes and correlations of participant experience and evaluation of an interactive bioterrorism release exercise – a mixed methods study', Journal of Global Biosecurity, vol. 1

Sparks R; Jin B; Karimi S; Paris C; MacIntyre CR, 2019, 'Rejoinder', Quality Engineering, vol. 31, pp. 105 - 107, http://dx.doi.org/10.1080/08982112.2018.1547831

Sparks R; Jin B; Karimi S; Paris C; MacIntyre CR, 2019, 'Real-time monitoring of events applied to syndromic surveillance', Quality Engineering, vol. 31, pp. 73 - 90, http://dx.doi.org/10.1080/08982112.2018.1537443

Padmawati RS; Heywood A; Sitaresmi MN; Atthobari J; MacIntyre CR; Soenarto Y; Seale H, 2019, 'Religious and community leaders' acceptance of rotavirus vaccine introduction in Yogyakarta, Indonesia: A qualitative study', BMC Public Health, vol. 19, http://dx.doi.org/10.1186/s12889-019-6706-4

Moa AM; Adam DC; MacIntyre CR, 2019, 'Inter-seasonality of influenza in Australia.', Influenza Other Respir Viruses, http://dx.doi.org/10.1111/irv.12642

Zhang EJ; Chughtai AA; Heywood A; MacIntyre CR, 2019, 'Influence of political and medical leaders on parental perception of vaccination: A cross-sectional survey in Australia', BMJ Open, vol. 9, http://dx.doi.org/10.1136/bmjopen-2018-025866

Dirmesropian S; Liu B; Wood JG; MacIntyre CR; McIntyre P; Karki S; Jayasinghe S; Newall AT, 2019, 'Pneumonia hospitalisation and case-fatality rates in older Australians with and without risk factors for pneumococcal disease: implications for vaccine policy', Epidemiology and infection, vol. 147, pp. e118, http://dx.doi.org/10.1017/S0950268818003473

Joshi A; Karim S; Sparks R; Paris C; MacIntyre R, 2019, 'Survey of Text-based Epidemic Intelligence: A Computational Linguistic Perspective', ACM Computing Surveys

David H; MacIntyre R, 2019, 'Germ line genome editing and the emerging struggle for supremacy in the Chemical, Biological and Radiological (CBR) balance of power', Global Biosecurity, vol. 1, pp. 169 - 173, https://jglobalbiosecurity.com/articles/18/

Jayasundara D; Hui BB; Regan DG; Heywood AE; MacIntyre CR; Wood JG, 2019, 'Modelling the decline and future of hepatitis A transmission in Australia', Journal of Viral Hepatitis, vol. 26, pp. 199 - 207, http://dx.doi.org/10.1111/jvh.13018

MacIntyre R; Heslop D; Nand D; Schramm C; Butel M; Rawlinson W; Baker M; Kiedrzynski T; Nelson C; Fotualii L; Yeo K; Elsgaard J; Fonua L; Lane M, 2019, 'Exercise Mataika: White Paper on response to a smallpox bioterrorism release in the Pacific', Journal of Global Biosecurity

Hii A; Chughtai AA; Housen T; Saketa S; Kunasekaran MP; Sulaiman F; Yanti NS; MacIntyre CR, 2018, 'Epidemic intelligence needs of stakeholders in the Asia-Pacific region', Western Pacific surveillance and response journal : WPSAR, vol. 9, pp. 28 - 36, http://dx.doi.org/10.5365/wpsar.2018.9.2.009

Chen X; Chughtai AA; Macintyre CR, 2018, 'Recalibration of the Grunow-Finke Assessment Tool to Improve Performance in Detecting Unnatural Epidemics', Risk analysis : an official publication of the Society for Risk Analysis

MacIntyre CR; Chughtai AA; Barnes M; Ridda I; Seale H; Toms R; Heywood A, 2018, 'The role of pneumonia and secondary bacterial infection in fatal and serious outcomes of pandemic influenza a(H1N1)pdm09 11 Medical and Health Sciences 1103 Clinical Sciences 11 Medical and Health Sci', BMC Infectious Diseases, vol. 18, http://dx.doi.org/10.1186/s12879-018-3548-0

Adam DC; Scotch M; MacIntyre CR, 2018, 'Bayesian phylogeography and pathogenic characterization of smallpox based on HA, ATI, and crMB genes', Molecular Biology and Evolution, vol. 35, pp. 2607 - 2617, http://dx.doi.org/10.1093/molbev/msy153

Bui CM; Adam DC; Njoto E; Scotch M; MacIntyre CR, 2018, 'Characterising routes of H5N1 and H7N9 spread in China using Bayesian phylogeographical analysis', Emerging microbes & infections, vol. 7, pp. 184, http://dx.doi.org/10.1038/s41426-018-0185-z

Zhang Y; Muscatello DJ; Wang Q; Yang P; Pan Y; Huo D; Liu Z; Zhao X; Tang Y; Li C; Chughtai AA; Macintyre CR, 2018, 'Hospitalizations for influenza-associatesevere acute respiratory infection, Beijing, China, 2014–2016', Emerging Infectious Diseases, vol. 24, pp. 2098 - 2102, http://dx.doi.org/10.3201/eid2411.171410

Tian Y; Chughtai AA; Gao Z; Yan H; Chen Y; Liu B; Huo D; Jia L; Wang Q; MacIntyre CR, 2018, 'Prevalence and genotypes of group A rotavirus among outpatient children under five years old with diarrhea in Beijing, China, 2011-2016', BMC Infectious Diseases, vol. 18, http://dx.doi.org/10.1186/s12879-018-3411-3

Chen C; Beutels P; Wood J; Menzies R; MacIntyre CR; McIntyre P; Newall AT, 2018, 'Retrospective cost-effectiveness of the 23-valent pneumococcal polysaccharide vaccination program in Australia', Vaccine, vol. 36, pp. 6307 - 6313, http://dx.doi.org/10.1016/j.vaccine.2018.08.084

MacIntyre CR; Dyda A; Bui CM; Chughtai AA, 2018, 'Author Response to Comments on “Rolling epidemic of Legionnaires’ disease outbreaks in small geographic areas”', Emerging Microbes and Infections, vol. 7, http://dx.doi.org/10.1038/s41426-018-0150-x

Adam DC; Bui CM; Heywood AE; Kunasekaran M; Sheikh M; Narasimhan P; MacIntyre CR, 2018, 'Adherence to anti-vectorial prevention measures among travellers with chikungunya and malaria returning to Australia: Comparative epidemiology', BMC Research Notes, vol. 11, http://dx.doi.org/10.1186/s13104-018-3695-9

Costantino V; Kunasekaran MP; Chughtai AA; MacIntyre CR, 2018, 'How Valid Are Assumptions about Re-emerging Smallpox? A Systematic Review of Parameters Used in Smallpox Mathematical Models', Military Medicine, vol. 183, pp. e200 - e207, http://dx.doi.org/10.1093/milmed/usx092

Zhang Y; Cao Z; Costantino V; Muscatello DJ; Chughtai AA; Yang P; Wang Q; MacIntyre CR, 2018, 'Influenza illness averted by influenza vaccination among school year children in Beijing, 2013-2016', Influenza and other Respiratory Viruses, vol. 12, pp. 687 - 694, http://dx.doi.org/10.1111/irv.12585

Chughtai AA; Chen X; Macintyre CR, 2018, 'Risk of self-contamination during doffing of personal protective equipment', American Journal of Infection Control, vol. 46, pp. 1329 - 1334, http://dx.doi.org/10.1016/j.ajic.2018.06.003

Dyda A; McIntyre P; Karki S; MacIntyre CR; Newall AT; Banks E; Kaldor J; Liu B, 2018, 'Pertussis vaccination in a cohort of older Australian adults following a cocooning vaccination program', Vaccine, vol. 36, pp. 4157 - 4160, http://dx.doi.org/10.1016/j.vaccine.2018.05.109

Saha A; Hayen A; Ali M; Rosewell A; MacIntyre CR; Clemens JD; Qadri F, 2018, 'Socioeconomic drivers of vaccine uptake: An analysis of the data of a geographically defined cluster randomized cholera vaccine trial in Bangladesh', Vaccine, vol. 36, pp. 4742 - 4749, http://dx.doi.org/10.1016/j.vaccine.2018.04.084

Njoto EN; Scotch M; Bui CM; Adam DC; Chughtai AA; MacIntyre CR, 2018, 'Phylogeography of H5N1 avian influenza virus in Indonesia', Transboundary and Emerging Diseases, vol. 65, pp. 1339 - 1347, http://dx.doi.org/10.1111/tbed.12883

Haire B; Komesaroff P; Leontini R; Raina MacIntyre C, 2018, 'Raising Rates of Childhood Vaccination: The Trade-off Between Coercion and Trust', Journal of Bioethical Inquiry, vol. 15, pp. 199 - 209, http://dx.doi.org/10.1007/s11673-018-9841-1

MacIntyre CR; Dyda A; Bui CM; Chughtai AA, 2018, 'Rolling epidemic of Legionnaires' disease outbreaks in small geographic areas article', Emerging Microbes and Infections, vol. 7, http://dx.doi.org/10.1038/s41426-018-0051-z

MacIntyre CR; Costantino V; Chen X; Segelov E; Chughtai AA; Kelleher A; Kunasekaran M; Lane JM, 2018, 'Influence of population immunosuppression and past vaccination on smallpox reemergence', Emerging Infectious Diseases, vol. 24, pp. 646 - 653, http://dx.doi.org/10.3201/eid2404.171233

Karki S; Muscatello DJ; Banks E; MacIntyre CR; McIntyre P; Liu B, 2018, 'Association between body mass index and laboratory-confirmed influenza in middle aged and older adults: a prospective cohort study', International Journal of Obesity, vol. 42, pp. 1480 - 1488, http://dx.doi.org/10.1038/s41366-018-0029-x

Ajisegiri WS; Chughtai AA; MacIntyre CR, 2018, 'A Risk Analysis Approach to Prioritizing Epidemics: Ebola Virus Disease in West Africa as a Case Study', Risk Analysis, vol. 38, pp. 429 - 441, http://dx.doi.org/10.1111/risa.12876

Dyda A; Stelzer-Braid S; Adam D; Chughtai AA; Macintyre CR, 2018, 'The association between acute flaccid myelitis (AFM) and enterovirus D68 (EV-D68) – what is the evidence for causation?', Eurosurveillance, vol. 23, http://dx.doi.org/10.2807/1560-7917.ES.2018.23.3.17-00310

Chen C; Wood JG; Beutels P; Menzies R; MacIntyre CR; Dirmesropian S; Reyes JF; McIntyre P; Newall AT, 2018, 'The role of timeliness in the cost-effectiveness of older adult vaccination: a case study of pneumococcal conjugate vaccine in Australia', Vaccine, vol. 36, pp. 1265 - 1271, http://dx.doi.org/10.1016/j.vaccine.2018.01.052

Meyers J; Logaraj M; Ramraj B; Narasimhan P; Macintyre CR, 2018, 'Epidemic varicella zoster virus among university students, India', Emerging Infectious Diseases, vol. 24, pp. 366 - 369, http://dx.doi.org/10.3201/eid2402.170659

Iuliano AD; Roguski KM; Chang HH; Muscatello DJ; Palekar R; Tempia S; Cohen C; Gran JM; Schanzer D; Cowling BJ; Wu P; Kyncl J; Ang LW; Park M; Redlberger-Fritz M; Yu H; Espenhain L; Krishnan A; Emukule G; van Asten L; Pereira da Silva S; Aungkulanon S; Buchholz U; Widdowson MA; Bresee JS; Azziz-Baumgartner E; Cheng PY; Dawood F; Foppa I; Olsen S; Haber M; Jeffers C; MacIntyre CR; Newall AT; Wood JG; Kundi M; Popow-Kraupp T; Ahmed M; Rahman M; Marinho F; Sotomayor Proschle CV; Vergara Mallegas N; Luzhao F; Sa L; Barbosa-Ramírez J; Sanchez DM; Gomez LA; Vargas XB; Acosta Herrera AB; Llanés MJ; Fischer TK; Krause TG; Mølbak K; Nielsen J; Trebbien R; Bruno A; Ojeda J; Ramos H; an der Heiden M; del Carmen Castillo Signor L; Serrano CE; Bhardwaj R; Chadha M; Narayan V; Kosen S; Bromberg M; Glatman-Freedman A; Kaufman Z; Arima Y; Oishi K; Chaves S; Nyawanda B; Al-Jarallah RA; Kuri-Morales PA; Matus CR; Corona ME J; Burmaa A; Darmaa O; Obtel M; Cherkaoui I; van den Wijngaard CC; van der Hoek W; Baker M; Bandaranayake D; Bissielo A; Huang S; Lopez L; Newbern C; Flem E; Grøneng GM; Hauge S; de Cosío FG; de Moltó Y; Castillo LM; Cabello MA; von Horoch M; Medina Osis J; Machado A; Nunes B; Rodrigues AP, 2018, 'Estimates of global seasonal influenza-associated respiratory mortality: a modelling study', The Lancet, vol. 391, pp. 1285 - 1300, http://dx.doi.org/10.1016/S0140-6736(17)33293-2

Raina MacIntyre C; Engells TE; Scotch M; Heslop DJ; Gumel AB; Poste G; Chen X; Herche W; Steinhöfel K; Lim S; Broom A, 2018, 'Converging and emerging threats to health security', Environment Systems and Decisions, vol. 38, pp. 198 - 207, http://dx.doi.org/10.1007/s10669-017-9667-0

Itzwerth R; Moa A; MacIntyre CR, 2018, 'Australia's influenza pandemic preparedness plans: An analysis', Journal of Public Health Policy, vol. 39, pp. 111 - 124, http://dx.doi.org/10.1057/s41271-017-0109-5

MacIntyre CR; Katelaris AL; Ridda I; Chughtai AA; Moa A; Barnes M; Kabir M; Bradstock K, 2018, 'The immunogenicity of 7-valent pneumococcal conjugate vaccine (PCV7) in adult bone marrow transplant patients', British Journal of Haematology, vol. 181, pp. 860 - 863, http://dx.doi.org/10.1111/bjh.14725

Bui CM; Gardner L; MacIntyre CR; Sarkar S, 2017, 'Erratum: Correction: Influenza A H5N1 and H7N9 in China: A spatial risk analysis (PloS one (2017) 12 4 (e0174980))', PloS one, vol. 12, pp. e0176903, http://dx.doi.org/10.1371/journal.pone.0176903

Menzies RI; Royle J; MacIntyre CR, 2017, 'Vaccine myopia: adult vaccination also needs attention', The Medical journal of Australia, vol. 207, pp. 407

Gale M; Hayen A; Truman G; Varma R; Forssman BL; MacIntyre CR, 2017, 'Demographic and geographical risk factors for gonorrhoea and chlamydia in greater Western Sydney, 2003-2013', Communicable diseases intelligence quarterly report, vol. 41, pp. E134 - E141

Menzies RI; Leask J; Royle J; MacIntyre CR, 2017, 'Vaccine myopia: adult vaccination also needs attention', The Medical journal of Australia, vol. 206, pp. 238 - 239


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