Select Publications

Book Chapters

Pal Singh R; Kothari R; Egan S, 2017, 'Exploring the complexity of macroalgal-bacterial interactions through interkingdom signalling system', in Systems Biology of Marine Ecosystems, Springer, pp. 301 - 315,

EGAN S; KUMAR V; NAPPI J; GARDINER M, 2017, 'Microbial Diversity and Symbiotic Interactions with Macroalgae', in Algal and Cyanobacteria Symbioses, WORLD SCIENTIFIC (EUROPE), pp. 493 - 546,

Egan S; Penesyan A, 2012, 'Marine bacteria as a source of new antibiotics', in Bioactive Compounds: Types, Biological Activities and Health Effects, pp. 381 - 412

Matz C; Webb JS; Schupp PJ; Phang SY; Penesyan A; Egan S; Steinberg P; Kjelleberg S, 2011, 'Chemical defense in marine biofilm bacteria', in Environmental Chemistry: New Techniques and Data, pp. 120 - 131

Thomas T; Yung PY; Kjelleberg S, 2011, 'Phylogenetic screening of metagenomic libraries using homing endonuclease restriction and marker insertion', in de Bruijn FJ (ed.), Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches, Wiley-Blackwell, Hoboken, New Jersey, pp. 245 - 250

Journal articles

McGrath AH; Lema K; Egan S; Wood G; Gonzalez SV; Kjelleberg S; Steinberg PD; Marzinelli EM, 2024, 'Correction to: Disentangling direct vs indirect effects of microbiome manipulations in a habitat-forming marine holobiont (npj Biofilms and Microbiomes, (2024), 10, 1, (33), 10.1038/s41522-024-00503-x)', npj Biofilms and Microbiomes, 10,

McGrath AH; Lema K; Egan S; Wood G; Gonzalez SV; Kjelleberg S; Steinberg PD; Marzinelli EM, 2024, 'Disentangling direct vs indirect effects of microbiome manipulations in a habitat-forming marine holobiont', npj Biofilms and Microbiomes, 10,

Zhuang Y; Liu T; Lin Q; Bai Y; Ma M; Wang M; Liu Q; Egan S; Wang G, 2024, 'Transcriptome analysis reveals the rapid defense responses in a disease-resistant brown seaweed against a bacterial pathogen', Aquaculture, 590,

Christi K; Hudson J; Egan S, 2024, 'Current approaches to genetic modification of marine bacteria and considerations for improved transformation efficiency', Microbiological Research, 284,

Khan T; Song W; Nappi J; Marzinelli EM; Egan S; Thomas T, 2024, 'Functional guilds and drivers of diversity in seaweed-associated bacteria', FEMS Microbes, 5,

Hudson J; Egan S, 2024, 'Marine diseases and the Anthropocene: Understanding microbial pathogenesis in a rapidly changing world', Microbial Biotechnology, 17,

Syukur S; Richmond J; Majzoub ME; Nappi J; Egan S; Thomas T, 2024, 'Not all parents are the same: Diverse strategies of symbiont transmission in seaweeds', Environmental Microbiology, 26,

Song W; Zhang S; Majzoub ME; Egan S; Kjelleberg S; Thomas T, 2024, 'The impact of interspecific competition on the genomic evolution of Phaeobacter inhibens and Pseudoalteromonas tunicata during biofilm growth', Environmental Microbiology, 26,

Li J; Saha M; Majzoub ME; Yang T; Chu H; Thomas T; Weinberger F; Egan S, 2024, 'Non-selective microbiota reduction after the elicitation of a seaweed's immune response.', Environ Microbiol Rep, 16, pp. e13268,

Nappi J; Goncalves P; Khan T; Majzoub ME; Grobler AS; Marzinelli EM; Thomas T; Egan S, 2023, 'Differential priority effects impact taxonomy and functionality of host-associated microbiomes', Molecular Ecology, 32, pp. 6278 - 6293,

Pintado J; Del Olmo G; Guinebert T; Ruiz P; Nappi J; Thomas T; Egan S; Masaló I; Cremades J, 2023, 'Manipulating the Ulva holobiont: Co-culturing Ulva ohnoi with Phaeobacter bacteria as a strategy for disease control in fish-macroalgae IMTA-RAS aquaculture', Journal of Applied Phycology, 35, pp. 2017 - 2029,

Murúa P; Garvetto A; Egan S; Gachon CMM, 2023, 'The Reemergence of Phycopathology: When Algal Biology Meets Ecology and Biosecurity', Annual Review of Phytopathology, 61, pp. 231 - 255,

Page CE; Ainsworth TD; Leggat W; Egan S; Gupta AS; Raoult V; Gaston TF, 2023, 'Localising terrestrially derived pollution inputs to threatened near-shore coral reefs through stable isotope, water quality and oceanographic analysis', Marine Pollution Bulletin, 193,

Ma M; Zhuang Y; Chang L; Xiao L; Lin Q; Qiu Q; Chen D; Egan S; Wang G, 2023, 'Naturally occurring beneficial bacteria Vibrio alginolyticus X-2 protects seaweed from bleaching disease', mBio, 14,

Li J; Weinberger F; de Nys R; Thomas T; Egan S, 2023, 'A pathway to improve seaweed aquaculture through microbiota manipulation', Trends in Biotechnology, 41, pp. 545 - 556,

Page CE; Leggat W; Egan S; Ainsworth TD, 2023, 'A coral disease outbreak highlights vulnerability of remote high-latitude lagoons to global and local stressors', iScience, 26,

Parata L; Noiney J; Majzoub ME; Mazumder D; Egan S; Sammut J, 2023, 'The role of farming practice in nutrient assimilation in small-scale tilapia farming', Aquaculture, 563, pp. 739005,

Li J; Weinberger F; Saha M; Majzoub ME; Egan S, 2022, 'Cross-Host Protection of Marine Bacteria Against Macroalgal Disease', Microbial Ecology, 84, pp. 1288 - 1293,

Hudson J; Egan S, 2022, 'Opportunistic diseases in marine eukaryotes: Could Bacteroidota be the next threat to ocean life?', Environmental Microbiology, 24, pp. 4505 - 4518,

Bergman JL; Shaw T; Egan S; Ainsworth TD, 2022, 'Assessing the coral microbiome at the scale of tissue-specific habitats within the coral meta-organism', Frontiers in Marine Science, 9,

Hudson J; Deshpande N; Leblanc C; Egan S, 2022, 'Pathogen exposure leads to a transcriptional downregulation of core cellular functions that may dampen the immune response in a macroalga', Molecular Ecology, 31, pp. 3468 - 3480,

Ling F; Egan S; Zhuang Y; Chang L; Xiao L; Yang Q; Wang G, 2022, 'Epimicrobiome Shifts With Bleaching Disease Progression in the Brown Seaweed Saccharina japonica', Frontiers in Marine Science, 9,

Qi S; Wang J; Wan L; Dai Z; da Silva Matos DM; Du D; Egan S; Bonser SP; Thomas T; Moles AT, 2022, 'Arbuscular Mycorrhizal Fungi Contribute to Phosphorous Uptake and Allocation Strategies of Solidago canadensis in a Phosphorous-Deficient Environment', Frontiers in Plant Science, 13,

Li J; Majzoub ME; Marzinelli EM; Dai Z; Thomas T; Egan S, 2022, 'Bacterial controlled mitigation of dysbiosis in a seaweed disease', ISME Journal, 16, pp. 378 - 387,

Salikin NH; Dubois M; Nappi J; Lebhar H; Marquis C; Egan S, 2021, 'Novel nematode-killing protein-1 (Nkp-1) from a marine epiphytic bacterium pseudoalteromonas tunicata', Biomedicines, 9, pp. 1586,

Majzoub ME; McElroy K; Maczka M; Schulz S; Thomas T; Egana S, 2021, 'Genomic Evolution of the Marine Bacterium Phaeobacter inhibens during Biofilm Growth', Applied and Environmental Microbiology, 87, pp. 1 - 14,

Parata L; Sammut J; Egan S, 2021, 'Opportunities for microbiome research to enhance farmed freshwater fish quality and production', Reviews in Aquaculture, 13, pp. 2027 - 2037,

Parata L; Mazumder D; Sammut J; Egan S, 2021, 'Erratum: Diet type influences the gut microbiome and nutrient assimilation of Genetically Improved Farmed Tilapia (Oreochromis niloticus) (PLoS ONE (2020) 15:8 (e0237775) DOI: 10.1371/journal.pone.0237775)', PLoS ONE, 16,

Chen Q; Wu WW; Qi SS; Cheng H; Li Q; Ran Q; Dai ZC; Du DL; Egan S; Thomas T, 2021, 'Arbuscular mycorrhizal fungi improve the growth and disease resistance of the invasive plant Wedelia trilobata', Journal of Applied Microbiology, 130, pp. 582 - 591,

Salikin NH; Nappi J; Majzoub ME; Egan S, 2020, 'Combating parasitic nematode infections, newly discovered antinematode compounds from marine epiphytic bacteria', Microorganisms, 8, pp. 1 - 19,

Ali S; Jenkins B; Cheng J; Lobb B; Wei X; Egan S; Charles TC; McConkey BJ; Austin J; Doxey AC, 2020, 'Slr4, a newly identified S-layer protein from marine Gammaproteobacteria, is a major biofilm matrix component', Molecular Microbiology, 114, pp. 979 - 990,

Zhang X; Xu D; Huang S; Wang S; Han W; Liang C; Zhang Y; Fan X; Zhang X; Wang Y; Wang W; Egan S; Saha M; Li F; Ye N, 2020, 'The effect of elevated pCO2 on cadmium resistance of a globally important diatom', Journal of Hazardous Materials, 396,

Parata L; Mazumder D; Sammut J; Egan S, 2020, 'Diet type influences the gut microbiome and nutrient assimilation of Genetically Improved Farmed Tilapia (Oreochromis niloticus)', PLoS ONE, 15, pp. e0237775,

Egan S; Fukatsu T; Francino MP, 2020, 'Opportunities and Challenges to Microbial Symbiosis Research in the Microbiome Era', Frontiers in Microbiology, 11,

Zhang R; Chang L; Xiao L; Zhang X; Han Q; Li N; Egan S; Wang G, 2020, 'Diversity of the epiphytic bacterial communities associated with commercially cultivated healthy and diseased Saccharina japonica during the harvest season', Journal of Applied Phycology, 32, pp. 2071 - 2080,

Dittami SM; Peters AF; West JA; Cariou T; KleinJan H; Burgunter-Delamare B; Prechoux A; Egan S; Boyen C, 2020, 'Revisiting Australian Ectocarpus subulatus (Phaeophyceae) From the Hopkins River: Distribution, Abiotic Environment, and Associated Microbiota', Journal of Phycology, 56, pp. 719 - 729,

Wu Z; Palanimuthu D; Braidy N; Salikin NH; Egan S; Huang MLH; Richardson DR, 2020, 'Novel multifunctional iron chelators of the aroyl nicotinoyl hydrazone class that markedly enhance cellular NAD+/NADH ratios', British Journal of Pharmacology, 177, pp. 1967 - 1987,

Parata L; Nielsen S; Xing X; Thomas T; Egan S; Vergés A, 2020, 'Age, gut location and diet impact the gut microbiome of a tropical herbivorous surgeonfish', FEMS Microbiology Ecology, 96,

Trevathan-Tackett SM; Sherman CDH; Huggett MJ; Campbell AH; Laverock B; Hurtado-McCormick V; Seymour JR; Firl A; Messer LF; Ainsworth TD; Negandhi KL; Daffonchio D; Egan S; Engelen AH; Fusi M; Thomas T; Vann L; Hernandez-Agreda A; Gan HM; Marzinelli EM; Steinberg PD; Hardtke L; Macreadie PI, 2019, 'A horizon scan of priorities for coastal marine microbiome research', Nature Ecology and Evolution, 3, pp. 1509 - 1520,

Nappi J; Soldi E; Egan S, 2019, 'Diversity and Distribution of Bacteria Producing Known Secondary Metabolites', Microbial Ecology, 78, pp. 885 - 894,

Breider S; Sehar S; Berger M; Thomas T; Brinkhoff T; Egan S, 2019, 'Genome sequence of Epibacterium ulvae strain DSM 24752T, an indigoidine-producing, macroalga-associated member of the marine Roseobacter group', Environmental Microbiomes, 14,

Hudson J; Kumar V; Egan S, 2019, 'Comparative genome analysis provides novel insight into the interaction of Aquimarina sp. AD1, BL5 and AD10 with their macroalgal host', Marine Genomics, 46, pp. 8 - 15,

Dittmann KK; Porsby CH; Goncalves P; Mateiu RV; Sonnenschein EC; Bentzon-Tilia M; Egan S; Gram L, 2019, 'Tropodithietic acid induces oxidative stress response, cell envelope biogenesis and iron uptake in Vibrio vulnificus', Environmental Microbiology Reports, 11, pp. 581 - 588,

Majzoub ME; Beyersmann PG; Simon M; Thomas T; Brinkhoff T; Egan S, 2019, 'Phaeobacter inhibens controls bacterial community assembly on a marine diatom', FEMS Microbiology Ecology, 95,

Wilkes Walburn J; Wemheuer B; Thomas T; Copeland E; O'Connor W; Booth M; Fielder S; Egan S, 2019, 'Diet and diet-associated bacteria shape early microbiome development in Yellowtail Kingfish (Seriola lalandi)', Microbial Biotechnology, 12, pp. 275 - 288,

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