By Professor Susan Clark

Preprints

Tiedemann RL; Hrit J; Du Q; Wiseman AK; Eden HE; Dickson BM; Kong X; Chomiak AA; Vaughan RM; Hebert JM; David Y; Zhou W; Baylin SB; Jones PA; Clark SJ; Rothbart SB, 2024, UHRF1 ubiquitin ligase activity supports the maintenance of low-density CpG methylation., http://dx.doi.org/10.1101/2024.02.13.580169

Schmitz U; Shah JS; Dhungel BP; Monteuuis G; Luu P-L; Petrova V; Metierre C; Nair SS; Bailey CG; Saunders VA; Turhan AG; White DL; Branford S; Clark S; Hughes TP; Wong JJ-L; Rasko JEJ, 2020, Widespread aberrant alternative splicing despite molecular remission in chronic myeloid leukemia patients, http://dx.doi.org/10.1101/2020.07.31.20165597

Luu P-L; Ong P-T; Loc TTH; Lam D; Pidsley R; Stirzaker C; Clark SJ, 2020, MethPanel: a parallel pipeline and interactive analysis tool for multiplex bisulphite PCR sequencing to assess DNA methylation biomarker panels for disease detection, http://dx.doi.org/10.1101/2020.02.09.941013

Schumann U; Zhang H-N; Sibbritt T; Pan A; Horvath A; Gross S; Clark SJ; Yang L; Preiss T, 2020, Multiple links between 5-methylcytosine content of mRNA and translation, http://dx.doi.org/10.1101/2020.02.04.933499

Milevskiy MJG; Gujral U; Lama Marques CD; Stone A; Northwood K; Burke LJ; Gee JMW; Nephew K; Clark S; Brown MA, 2018, MicroRNA-196a is regulated by ER and is a prognostic biomarker in ER+ Breast Cancer, http://dx.doi.org/10.1101/329227

O'Donoghue SI; Baldi BF; Clark SJ; Darling AE; Hogan JM; Kaur S; Maier-Hein L; McCarthy DJ; Moore WJ; Stenau E; Swedlow JR; Vuong J; Procter JB, 2018, Visualization of Biomedical Data, http://dx.doi.org/10.7287/peerj.preprints.26896

O'Donoghue SI; Baldi BF; Clark SJ; Darling AE; Hogan JM; Kaur S; Maier-Hein L; McCarthy DJ; Moore WJ; Stenau E; Swedlow JR; Vuong J; Procter JB, 2018, Visualization of Biomedical Data, http://dx.doi.org/10.7287/peerj.preprints.26896v1

Du Q; Bert SA; Armstrong NJ; Caldon CE; Song JZ; Nair SS; Gould CM; Luu PL; Khoury A; Qu W; Zotenko E; Stirzaker C; Clark SJ, 2018, Replication timing shapes the cancer epigenome and the nature of chromosomal rearrangements, http://dx.doi.org/10.1101/251280

Riebler A; Menigatti M; Song JZ; Statham AL; Stirzaker C; Mahmud N; Mein CA; Clark SJ; Robinson MD, 2013, BayMeth: Improved DNA methylation quantification for affinity capture sequencing data using a flexible Bayesian approach, http://dx.doi.org/10.48550/arxiv.1312.3115

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