By Associate Professor Jason Dowling

Journal articles

Ghose S; Dowling JA; Rai R; Liney GP, 2017, 'Substitute CT generation from a single ultra short time echo MRI sequence: Preliminary study', Physics in Medicine and Biology, 62, pp. 2950 - 2960, http://dx.doi.org/10.1088/1361-6560/aa508a

Whelan B; Liney GP; Dowling JA; Rai R; Holloway L; McGarvie L; Feain I; Barton M; Berry M; Wilkins R; Keall P, 2017, 'An MRI-compatible patient rotation system - Design, construction, and first organ deformation results:', Medical Physics, 44, pp. 581 - 588, http://dx.doi.org/10.1002/mp.12065

Ghose S; Denham JW; Ebert MA; Kennedy A; Mitra J; Dowling JA, 2016, 'Multi-atlas and unsupervised learning approach to perirectal space segmentation in CT images', Australasian Physical and Engineering Sciences in Medicine, 39, pp. 933 - 941, http://dx.doi.org/10.1007/s13246-016-0496-0

Chandra SS; Dowling JA; Greer PB; Martin J; Wratten C; Pichler P; Fripp J; Crozier S, 2016, 'Fast automated segmentation of multiple objects via spatially weighted shape learning', Physics in Medicine and Biology, 61, pp. 8070 - 8084, http://dx.doi.org/10.1088/0031-9155/61/22/8070

Ghose S; Mitra J; Rivest-Hénault D; Fazlollahi A; Stanwell P; Pichler P; Sun J; Fripp J; Greer PB; Dowling JA, 2016, 'MRI-alone radiation therapy planning for prostate cancer: Automatic fiducial marker detection', Medical Physics, 43, pp. 2218 - 2228, http://dx.doi.org/10.1118/1.4944871

Walker A; Metcalfe P; Liney G; Batumalai V; Dundas K; Glide-Hurst C; Delaney GP; Boxer M; Yap ML; Dowling J; Rivest-Henault D; Pogson E; Holloway L, 2016, 'MRI geometric distortion: Impact on tangential whole-breast IMRT', Journal of Applied Clinical Medical Physics, 17, pp. 7 - 19, http://dx.doi.org/10.1120/jacmp.v17i5.6242

, 2016, 'EPSM2015, Engineering and Physical Sciences in Medicine : Museum of New Zealand Te Papa Tongarewa, Wellington, 8-12 November 2015, Conference abstracts.', Australas Phys Eng Sci Med, 39, pp. 259 - 354, http://dx.doi.org/10.1007/s13246-015-0410-1

Walker A; Metcalfe P; Liney G; Batumalai V; Dundas K; Glide-Hurst C; Delaney GP; Boxer M; Yap ML; Dowling J; Rivest-Henault D; Pogson E; Holloway L, 2016, 'MRI geometric distortion: Impact on tangential whole-breast IMRT.', J Appl Clin Med Phys, 17, pp. 7 - 19, http://dx.doi.org/10.1120/jacmp.v17i5.6242

Dowling JA; Sun J; Pichler P; Rivest-Hénault D; Ghose S; Richardson H; Wratten C; Martin J; Arm J; Best L; Chandra SS; Fripp J; Menk FW; Greer PB, 2015, 'Automatic substitute computed tomography generation and contouring for magnetic resonance imaging (MRI)-alone external beam radiation therapy from standard MRI sequences', International Journal of Radiation Oncology Biology Physics, 93, pp. 1144 - 1153, http://dx.doi.org/10.1016/j.ijrobp.2015.08.045

Whelan B; Kumar S; Dowling J; Begg J; Lambert J; Lim K; Vinod SK; Greer PB; Holloway L, 2015, 'Utilising pseudo-CT data for dose calculation and plan optimization in adaptive radiotherapy', Australasian Physical and Engineering Sciences in Medicine, 38, pp. 561 - 568, http://dx.doi.org/10.1007/s13246-015-0376-z

De Leon JF; Jameson MG; Windsor A; Cloak K; Keats S; Vial P; Holloway L; Metcalfe P; Sidhom M, 2015, 'Superior target volume and organ stability with the use of endorectal balloons in post-prostatectomy radiotherapy', Journal of Medical Imaging and Radiation Oncology, 59, pp. 507 - 513, http://dx.doi.org/10.1111/1754-9485.12300

Rivest-Hénault D; Dowson N; Greer PB; Fripp J; Dowling JA, 2015, 'Robust inverse-consistent affine CT-MR registration in MRI-assisted and MRI-alone prostate radiation therapy', Medical Image Analysis, 23, pp. 56 - 69, http://dx.doi.org/10.1016/j.media.2015.04.014

Ghose S; Holloway L; Lim K; Chan P; Veera J; Vinod SK; Liney G; Greer PB; Dowling J, 2015, 'A review of segmentation and deformable registration methods applied to adaptive cervical cancer radiation therapy treatment planning', Artificial Intelligence in Medicine, 64, pp. 75 - 87, http://dx.doi.org/10.1016/j.artmed.2015.04.006

Sun J; Dowling J; Pichler P; Menk F; Rivest-Henault D; Lambert J; Parker J; Arm J; Best L; Martin J; Denham JW; Greer PB, 2015, 'MRI simulation: End-to-end testing for prostate radiation therapy using geometric pelvic MRI phantoms', Physics in Medicine and Biology, 60, pp. 3097 - 3109, http://dx.doi.org/10.1088/0031-9155/60/8/3097

Walker A; Liney G; Holloway L; Dowling J; Rivest-Henault D; Metcalfe P, 2015, 'Continuous table acquisition MRI for radiotherapy treatment planning: Distortion assessment with a new extended 3D volumetric phantom', Medical Physics, 42, pp. 1982 - 1991, http://dx.doi.org/10.1118/1.4915920

Sun J; Barnes M; Dowling J; Menk F; Stanwell P; Greer PB, 2015, 'An open source automatic quality assurance (OSAQA) tool for the ACR MRI phantom', Australasian Physical and Engineering Sciences in Medicine, 38, pp. 39 - 46, http://dx.doi.org/10.1007/s13246-014-0311-8

Sun J; Dowling JA; Pichler P; Parker J; Martin J; Stanwell P; Arm J; Menk F; Greer PB, 2015, 'Investigation on the performance of dedicated radiotherapy positioning devices for MR scanning for prostate planning', Journal of Applied Clinical Medical Physics, 16, pp. 4 - 13, http://dx.doi.org/10.1120/jacmp.v16i2.4848

Sun J; Dowling JA; Pichler P; Parker J; Martin J; Stanwell P; Arm J; Menk F; Greer PB, 2015, 'Investigation on the performance of dedicated radiotherapy positioning devices for MR scanning for prostate planning', JOURNAL OF APPLIED CLINICAL MEDICAL PHYSICS, 16, pp. 4 - 13, http://dx.doi.org/10.1120/jacmp.v16i2.4848

Greer PB; Dowling J; Rivest-Henault D; Ghose S; Pichler P; Sun J; Richardson H; Menk F; Martin J; Wratten C, 2015, 'SP-0021: Generation of density maps for dose calculations from MRI using atlas methods', Radiotherapy and Oncology, 115, pp. S11 - S12, http://dx.doi.org/10.1016/s0167-8140(15)40021-0

Sun J; Pichler P; Dowling J; Menk F; Stanwell P; Arm J; Greer PB, 2014, 'MR simulation for prostate radiation therapy: Effect of coil mounting position on image quality', British Journal of Radiology, 87, http://dx.doi.org/10.1259/bjr.20140325

Litjens G; Toth R; van de Ven W; Hoeks C; Kerkstra S; van Ginneken B; Vincent G; Guillard G; Birbeck N; Zhang J; Strand R; Malmberg F; Ou Y; Davatzikos C; Kirschner M; Jung F; Yuan J; Qiu W; Gao Q; Edwards PE; Maan B; van der Heijden F; Ghose S; Mitra J; Dowling J; Barratt D; Huisman H; Madabhushi A, 2014, 'Evaluation of prostate segmentation algorithms for MRI: The PROMISE12 challenge', Medical Image Analysis, 18, pp. 359 - 373, http://dx.doi.org/10.1016/j.media.2013.12.002

Dowling JA, 2014, 'Opportunities for image analysis in radiation oncology', Australasian Physical and Engineering Sciences in Medicine, 37, pp. 275 - 277, http://dx.doi.org/10.1007/s13246-014-0278-5

, 2014, 'Engineering & Physical Sciences in Medicine Conference 2013 Pan Pacific Hotel, Perth, Australia, 3–7 November 2013 Oral presentation abstracts', Australasian Physical & Engineering Sciences in Medicine, 37, pp. 153 - 269, http://dx.doi.org/10.1007/s13246-014-0248-y

Dowling J; Pichler P; Sun J; Rivest-Henault D; Ghose S; Martin J; Wratten C; Stanwell P; Fripp J; Greer P, 2014, 'PD-0353: CT substitute derived from MRI for external beam prostate radiotherapy', Radiotherapy and Oncology, 111, pp. S135 - S135, http://dx.doi.org/10.1016/s0167-8140(15)30458-8

, 2014, 'Saturday 6 September 2014', Journal of Medical Imaging and Radiation Oncology, 58, pp. 113 - 165, http://dx.doi.org/10.1111/1754-9485.12221

, 2014, 'Scientific Exhibits', Journal of Medical Imaging and Radiation Oncology, 58, pp. 184 - 343, http://dx.doi.org/10.1111/1754-9485.12223

Jameson MG; De Leon J; Windsor AA; Cloak K; Keats S; Dowling JA; Chandra SS; Vial P; Sidhom M; Holloway L; Metcalfe P, 2013, 'Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry?', Radiotherapy and Oncology, 109, pp. 493 - 497, http://dx.doi.org/10.1016/j.radonc.2013.08.024

Ghose S; Holloway L; Lim K; Chan P; Veera J; Vinod SK; Liney G; Greer PB; Dowling J, 2013, 'A survey of cervix segmentation methods in magnetic resonance images', Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8198 LNCS, pp. 290 - 298, http://dx.doi.org/10.1007/978-3-642-41083-3_32

, 2013, '2012 Engineering and Physical Sciences in Medicine Conference Jupiter's Casino, Gold Coast, 2-6th December 2012 Abstracts', AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE, 36, pp. 65 - 139, http://dx.doi.org/10.1007/s13246-012-0168-7

Jameson MG; De Leon J; Windsor AA; Cloak K; Keats S; Vial P; Sidhom M; Holloway L; Metcalfe P; Dowling JA; Chandra SS, 2013, 'Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry?', Radiotherapy and Oncology, http://dx.doi.org/10.1016/j.radonc.2013.08.024

Chandra SS; Dowling JA; Shen KK; Raniga P; Pluim JPW; Greer PB; Salvado O; Fripp J, 2012, 'Patient specific prostate segmentation in 3-D magnetic resonance images', IEEE Transactions on Medical Imaging, 31, pp. 1955 - 1964, http://dx.doi.org/10.1109/TMI.2012.2211377

Dowling JA; Lambert J; Parker J; Salvado O; Fripp J; Capp A; Wratten C; Denham JW; Greer PB, 2012, 'An atlas-based electron density mapping method for magnetic resonance imaging (MRI)-alone treatment planning and adaptive MRI-based prostate radiation therapy', International Journal of Radiation Oncology Biology Physics, 83, http://dx.doi.org/10.1016/j.ijrobp.2011.11.056

Lambert J; Greer PB; Menk F; Patterson J; Parker J; Dahl K; Gupta S; Capp A; Wratten C; Tang C; Kumar M; Dowling J; Hauville S; Hughes C; Fisher K; Lau P; Denham JW; Salvado O, 2011, 'MRI-guided prostate radiation therapy planning: Investigation of dosimetric accuracy of MRI-based dose planning', Radiotherapy and Oncology, 98, pp. 330 - 334, http://dx.doi.org/10.1016/j.radonc.2011.01.012

Greer PB; Dowling JA; Lambert JA; Fripp J; Parker J; Denham JW; Wratten C; Capp A; Salvado O, 2011, 'A magnetic resonance imaging-based workflow for planning radiation therapy for prostate cancer', Medical Journal of Australia, 194, http://dx.doi.org/10.5694/j.1326-5377.2011.tb02939.x

, 2011, 'Conference abstracts', Australasian Physical & Engineering Sciences in Medicine, 34, pp. 105 - 166, http://dx.doi.org/10.1007/s13246-011-0056-6

Dowling J, 2009, 'Current and future prospects for optoelectronic retinal prostheses', Eye, 23, pp. 1999 - 2005, http://dx.doi.org/10.1038/eye.2008.385

Sahyun MRV; Adams H; Arney JS; Baetzold R; Bearss J; Belson J; Benwood B; Bi Y; Braun G; Buettner AV; Calabria A; Calvert R; Chang TC; Chatterjee A; Chen S; Cobene RL; Damera-Venkata N; Deardruff L; Delametter C; Dowling J; Feng XF; Gale L; Ganapathiappan S; Gissen D; Graczyk T; Graczyk T; Hall D; Herron S; Hersch R; Hertel D; Hinch G; Holm J; Holstun C; Hung PC; Imai FH; Kaarna A; Kawamoto H; Kella D; Kerofsky L; Laird J; Laplante P; Lee M; Lee TW; Leoni N; Li D; Lim SH; Lindstrand M; Loce R; Lukac R; Malzbender T; Marc R; McGuire M; Mizen MB; Mohammadi M; Moroney N; Morovic P; Ng HT; Nystrom B; Obrador P; Ohta N; Oittinen P; Ostromoukhov V; Ozimek E; Pan A; Piovoso M; Plataniotis K; Preston J; Ramamurthy A; Rasmussen R; Reddig W; Reed R; Rimai DS; Rosen M; Sangwan R; Shaw M; Shaw-Klein J; Sheridon N; Shyu J; Simmons S; Tarachandani A; Tastl I; Terlewski F; Thompson J; Tretter D; Tsumura N; Uroz J; Vercellone-Smith P; Veregin R; Viggiano S; Wang J; Weiss DS; Whitcomb DR; Wooddell G; Young R, 2006, 'Journal of Imaging Science and Technology: From the editor', Journal of Imaging Science and Technology, 50, http://dx.doi.org/10.2352/J.ImagingSci.Technol.(2006)50:6(iii)

Dowling J, 2005, 'Artificial human vision', Expert Review of Medical Devices, 2, pp. 73 - 85, http://dx.doi.org/10.1586/17434440.2.1.73

Dowling J, 2005, 'Artificial human vision', EXPERT REVIEW OF MEDICAL DEVICES, 2, pp. 73 - 85, http://dx.doi.org/10.1586/17434440.2.1.73

Conference Papers

Nicolson A; Dowling J; Koopman B, 2023, 'A Concise Model for Medical Image Captioning', in CEUR Workshop Proceedings, pp. 1611 - 1619

Nicolson A; Dowling J; Koopman B, 2023, 'e-Health CSIRO at RadSum23: Adapting a Chest X-Ray Report Generator to Multimodal Radiology Report Summarisation', in Proceedings of the Annual Meeting of the Association for Computational Linguistics, pp. 545 - 549

Liu S; Dowling JA; Engstrom C; Greer PB; Crozier S; Chandra SS, 2023, 'Manipulating Medical Image Translation with Manifold Disentanglement', in 2023 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2023, pp. 332 - 339, http://dx.doi.org/10.1109/DICTA60407.2023.00053

Leung SN; Dowling JA; Fripp J; Shen KK; Chandra SS, 2023, 'Medical Shape Pattern Analysis with MeshCNN', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI53787.2023.10230427

Chourak H; Barateau A; Nunes J-C; Greer PB; Tahri S; Lafond C; de Crevoisier R; Dowling J; Acosta O, 2022, 'Local quality assessment of patient specific synthetic-CT via voxel-wise analysis', in 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), IEEE, presented at 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 30 November 2022 - 02 December 2022, http://dx.doi.org/10.1109/dicta56598.2022.10034622

Lebrat L; Nicolson A; Santa Cruz R; Belous G; Koopman B; Dowling J, 2022, 'CSIRO at ImageCLEFmedical Caption 2022', in CEUR Workshop Proceedings, pp. 1455 - 1473

Xin B; Min H; Gillman AG; Koopman B; Dowling J; Nicolson A, 2022, 'CSIRO at the ImageCLEFmed 2022 Tuberculosis Caverns Detection Challenge: A 2D and 3D Deep Learning Detection Network Approach', in CEUR Workshop Proceedings, pp. 1626 - 1640

Finnegan R; Reynolds HM; Sun Y; Ebert MA; Holloway L; Sykes J; Dowling J; Haworth A, 2021, 'a probabilistic biological atlas for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S417 - S418, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000709667201103&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Chourak H; Barateau A; Cadin C; Lafond C; Nunes J; De Crevoiser R; Dowling J; Greer P; Acosta O, 2021, 'Spatial Characterization of errors in pseudo-CT generation for MRI-only radiotherapy', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S1408 - S1410, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000709667204179&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Cruz RS; Lebrat L; Bourgeat P; Dore V; Dowling J; Fripp J; Fookes C; Salvado O, 2021, 'Going deeper with brain morphometry using neural networks', in Proceedings - International Symposium on Biomedical Imaging, pp. 711 - 715, http://dx.doi.org/10.1109/ISBI48211.2021.9434039

Chourak H; Barateau A; Mylona E; Cadin C; Lafond C; Greer P; Dowling J; Jean-Claude-Nunes ; Crevoisier RD; Acosta O, 2021, 'Voxel-wise analysis for spatial characterisation of pseudo-ct errors in MRI-only radiotherapy planning', in Proceedings - International Symposium on Biomedical Imaging, pp. 395 - 399, http://dx.doi.org/10.1109/ISBI48211.2021.9433800

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