Select Publications
Conference Papers
2022, 'CSIRO at the ImageCLEFmed 2022 Tuberculosis Caverns Detection Challenge: A 2D and 3D Deep Learning Detection Network Approach', in CEUR Workshop Proceedings, pp. 1626 - 1640
,2021, 'a probabilistic biological atlas for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S417 - S418, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000709667201103&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2021, 'Spatial Characterization of errors in pseudo-CT generation for MRI-only radiotherapy', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S1408 - S1410, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000709667204179&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2021, 'Going deeper with brain morphometry using neural networks', in Proceedings - International Symposium on Biomedical Imaging, pp. 711 - 715, http://dx.doi.org/10.1109/ISBI48211.2021.9434039
,2021, 'Voxel-wise analysis for spatial characterisation of pseudo-ct errors in MRI-only radiotherapy planning', in Proceedings - International Symposium on Biomedical Imaging, pp. 395 - 399, http://dx.doi.org/10.1109/ISBI48211.2021.9433800
,2021, 'Advanced Propulsion as a Cornerstone for Space Exploration and Interstellar Living', in Proceedings of the International Astronautical Congress, IAC
,2021, 'AEHRC CSIRO at ImageCLEFmed caption 2021', in CEUR Workshop Proceedings, pp. 1317 - 1328
,2020, 'MRI only based planning to decrease toxicity in prostate cancer IMRT/IGRT: a dosimetric study', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S798 - S799, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000648572703008&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2020, 'Analysis of Cardiac Substructure Dosimetry in a Large, Multi-Centre Danish Breast Cancer Cohort: Trends and Predictive Modelling', in MEDICAL PHYSICS, WILEY, pp. E322 - E322, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000699823200217&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2019, 'Avoiding garbage in: A consensus workshop for refining gastric cancer radiotherapy atlas data', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SINGAPORE, Singapore, pp. S20 - S21, presented at ESTRO Meets Asia Conference, SINGAPORE, Singapore, 06 December 2019 - 08 December 2019, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000558740600045&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2019, 'Pseudo-CT generation for mri-only radiotherapy: Comparative study between a generative adversarial network, a u-net network, a patch-based, and an atlas based methods', in Proceedings - International Symposium on Biomedical Imaging, pp. 1109 - 1113, http://dx.doi.org/10.1109/ISBI.2019.8759278
,2018, 'Comparison of synthetic CT generation algorithms for MRI-only radiation planning in the pelvic region', in 2018 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2018 - Proceedings, http://dx.doi.org/10.1109/NSSMIC.2018.8824321
,2018, 'Spatial, Anatomically-Localized Mapping of Dose-Toxicity Associations Following Prostate Radiotherapy', in MEDICAL PHYSICS, WILEY, TN, Nashville, pp. E446 - E446, presented at 60th Annual Meeting of the American-Association-of-Physicists-in-Medicine, TN, Nashville, 29 July 2018 - 02 August 2018, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000434978003119&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2018, 'Verification of Synthetic CT Scans for MRI-Only Prostate Treatment with EPID Transit Image Prediction', in MEDICAL PHYSICS, WILEY, TN, Nashville, pp. E655 - E655, presented at 60th Annual Meeting of the American-Association-of-Physicists-in-Medicine, TN, Nashville, 29 July 2018 - 02 August 2018, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000434978005105&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2018, 'Can contouring probability maps be a predictor for prostate cancer treatment outcome and toxicity?', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S1186 - S1187, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)32459-9
,2018, 'Inter-observer contouring variation of multiple pelvic structures on CT and MR for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S869 - S870, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)31923-6
,2018, 'TRAC: Automated atlas based machine learning QA of contouring accuracy for the PROMETHEUS trial', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, SPAIN, Barcelona, pp. S429 - S430, presented at 37th Meeting of the European-Society-for-Radiotherapy-and-Oncology (ESTRO), SPAIN, Barcelona, 20 April 2018 - 24 April 2018, http://dx.doi.org/10.1016/S0167-8140(18)31133-2
,2017, 'MRI Only Anal Canal, Rectum, Cervix and Endometrium Radiation Therapy Planning (MARVEL)', in ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY, WILEY, pp. 24 - 24, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000413952600037&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2017, 'Pseudo-CT generation by conditional inference random forest for MRI-based radiotherapy treatment planning', in 25th European Signal Processing Conference, EUSIPCO 2017, Kos, Greece, pp. 46 - 50, presented at 2017 25th European Signal Processing Conference (EUSIPCO), Kos, Greece, 28 August 2017 - 02 September 2017, http://dx.doi.org/10.23919/EUSIPCO.2017.8081166
,2017, 'Inter-observer contouring similarity metrics, correlation with treatment outcome for prostate cancer', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S949 - S949, http://dx.doi.org/10.1016/S0167-8140(17)32260-0
,2016, 'An atlas based auto-contouring technique incorporating interobserver variation', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S897 - S897, http://dx.doi.org/10.1016/S0167-8140(16)33147-4
,2016, 'Atlas-based segmentation technique incorporating inter-observer delineation uncertainty for whole breast', in Baldock C; Rozenfeld A; Metcalfe P (eds.), Journal of Physics: Conference Series, IOP Publishing, AUSTRALIA, Tasmania, pp. 012002, presented at Conference on Micro-Mini and Nano-Dosimetry and Innovative Technologies in Radiation Therapy (MMND and ITRO), AUSTRALIA, Tasmania, 26 January 2016 - 28 January 2016, http://dx.doi.org/10.1088/1742-6596/777/1/012002
,, 2016, 'EPSM 2016, Engineering and Physical Sciences in Medicine : 6-10 November 2016, Sydney, Australia.', in Australas Phys Eng Sci Med, Netherlands, pp. 1045 - 1190, Netherlands, http://dx.doi.org/10.1007/s13246-016-0494-2
2015, 'Generation of density maps for dose calculations from MRI using atlas methods', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S11 - S12, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000688178300042&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2015, 'An Improved Patient-Specific Mortality Risk Prediction in ICU in a Random Forest Classification Framework', in Studies in Health Technology and Informatics, pp. 56 - 61, http://dx.doi.org/10.3233/978-1-61499-558-6-56
,2015, 'Human Activity Recognition from Smart-Phone Sensor Data using a Multi-Class Ensemble Learning in Home Monitoring', in Studies in Health Technology and Informatics, pp. 62 - 67, http://dx.doi.org/10.3233/978-1-61499-558-6-62
,2014, 'Automatic Atlas Based Electron Density and Structure Contouring for MRI-based Prostate Radiation Therapy on the Cloud', in Journal of Physics: Conference Series, http://dx.doi.org/10.1088/1742-6596/489/1/012048
,2014, 'CT substitute derived from MRI for external beam prostate radiotherapy', in RADIOTHERAPY AND ONCOLOGY, ELSEVIER IRELAND LTD, pp. S135 - S135, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000688272900341&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'Fast cine-magnetic resonance imaging point tracking for prostate cancer radiation therapy planning', in Journal of Physics: Conference Series, http://dx.doi.org/10.1088/1742-6596/489/1/012027
,2014, 'Fast multiatlas selection using composition of transformations for radiation therapy planning', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 105 - 115, http://dx.doi.org/10.1007/978-3-319-13972-2_10
,2014, 'Inverse-consistent rigid registration of CT and MR for MR-based planning and adaptive prostate radiation therapy', in Journal of Physics: Conference Series, http://dx.doi.org/10.1088/1742-6596/489/1/012039
,2014, 'Structure-guided nonrigid registration of CT-MR pelvis scans with large deformations in MR-based image guided radiation therapy', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 65 - 73, http://dx.doi.org/10.1007/978-3-319-05666-1_9
,2013, 'Multi-atlas and Gaussian mixture modeling based perirectal fat segmentation from CT images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 194 - 202, http://dx.doi.org/10.1007/978-3-642-41083-3_22
,2012, 'The Use of Cervical Cancer MRI Contouring Guidelines in Clinical Practice', in INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, ELSEVIER SCIENCE INC, MA, Boston, pp. S433 - S433, presented at 54th Annual Meeting of the American-Society-for-Radiation-Oncology (ASTRO), MA, Boston, 28 October 2012 - 31 October 2012, http://dx.doi.org/10.1016/j.ijrobp.2012.07.1147
,2012, 'Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning', in MEDICAL PHYSICS, AMER ASSOC PHYSICISTS MEDICINE AMER INST PHYSICS, NC, Charlotte, pp. 3694 - 3694, presented at 54th Annual Meeting and Exhibition of the American-Association-of-Physicists-in-Medicine (AAPM), NC, Charlotte, 29 July 2012 - 02 August 2012, http://dx.doi.org/10.1118/1.4735020
,2012, 'Requirements for the accuracy of electron density data planning for MRI based cervix cancer treatment planning', in Medical Physics, American Association Physicists Medicine American Inst P, Melville, NY, USA, pp. 39 (6):3694-3694; JUN 2012, presented at 55th Annual Meeting of the American Association of Physicists in Medicine, http://dx.doi.org/10.1118/1.4735020
,2011, 'Automatic segmentation of the prostate in 3D magnetic resonance images using case specific deformable models', in Proceedings - 2011 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2011, pp. 7 - 12, http://dx.doi.org/10.1109/DICTA.2011.10
,2011, 'Fast automatic multi-atlas segmentation of the prostate from 3D MR images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 10 - 21, http://dx.doi.org/10.1007/978-3-642-23944-1_2
,2011, 'SU‐D‐110‐05: MR‐Based Dose Calculation for Prostate Radiotherapy Using Atlas‐ Based Auto‐Segmentation', in Medical Physics, pp. 3387 - 3388, http://dx.doi.org/10.1118/1.3611541
,2010, 'Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 25 - 33, http://dx.doi.org/10.1007/978-3-642-15989-3_4
,2010, 'HistoCAD: Machine Facilitated Quantitative Histoimaging with Computer Assisted Diagnosis', in Madabhushi A; Dowling J; Yan PK; Fenster A; Abolmaesumi P; Hata N (eds.), PROSTATE CANCER IMAGING: COMPUTER-AIDED DIAGNOSIS, PROGNOSIS, AND INTERVENTION, SPRINGER-VERLAG BERLIN, PEOPLES R CHINA, Beijing, pp. 63 - 65, presented at International Workshop on Prostate Cancer Imaging, PEOPLES R CHINA, Beijing, 24 September 2010, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000286796700008&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2010, 'Prostate Cancer MR Imaging', in Madabhushi A; Dowling J; Yan PK; Fenster A; Abolmaesumi P; Hata N (eds.), PROSTATE CANCER IMAGING: COMPUTER-AIDED DIAGNOSIS, PROGNOSIS, AND INTERVENTION, SPRINGER-VERLAG BERLIN, PEOPLES R CHINA, Beijing, pp. 1 - 3, presented at International Workshop on Prostate Cancer Imaging, PEOPLES R CHINA, Beijing, 24 September 2010, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000286796700001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2010, 'Atlas based segmentation and mapping of organs at risk from planning CT for the development of voxel-wise predictive models of toxicity in prostate radiotherapy', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 42 - 51, http://dx.doi.org/10.1007/978-3-642-15989-3_6
,2010, 'Sci—Sat AM(1): Planning — 05: Feasibility of Atlas‐Based Organ Segmentation and Electron Density Mapping for MRI‐Based Prostate Radiation Therapy Planning', in Medical Physics, pp. 3907, http://dx.doi.org/10.1118/1.3476205
,2009, 'Nonrigid correction of interleaving artefacts in pelvic MRI', in Progress in Biomedical Optics and Imaging - Proceedings of SPIE, http://dx.doi.org/10.1117/12.812460
,2008, 'A comparison of DCT and DWT block based watermarking on medical image quality', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 454 - 466, http://dx.doi.org/10.1007/978-3-540-92238-4_35
,2008, 'Assuring authenticity of digital mammograms by image watermarking', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 204 - 211, http://dx.doi.org/10.1007/978-3-540-70538-3_29
,2007, 'Visual quality assessment of watermarked medical images', in Progress in Biomedical Optics and Imaging - Proceedings of SPIE, http://dx.doi.org/10.1117/12.707571
,2006, 'A display framework for presenting information from a visual prosthesis', in 13th Annual International Conference on Mechatronics and Machine Vision in Practice 2006, pp. 230 - 235
,2006, 'Simulated Artificial Human Vision: The Effects of Spatial Resolution and Frame Rate on Mobility', in Frontiers in Artificial Intelligence and Applications, pp. 138 - 143
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