Select Publications

Journal articles

Tam RY; van Dorst JM; McKay I; Coffey M; Ooi CY, 2022, 'Intestinal Inflammation and Alterations in the Gut Microbiota in Cystic Fibrosis: A Review of the Current Evidence, Pathophysiology and Future Directions', Journal of Clinical Medicine, 11, http://dx.doi.org/10.3390/jcm11030649

van Dorst JM; Tam RY; Ooi CY, 2022, 'What Do We Know about the Microbiome in Cystic Fibrosis? Is There a Role for Probiotics and Prebiotics?', Nutrients, 14, http://dx.doi.org/10.3390/nu14030480

Wong SL; Awatade NT; Astore MA; Allan KM; Carnell MJ; Slapetova I; Chen PC; Capraro A; Fawcett LK; Whan RM; Griffith R; Ooi CY; Kuyucak S; Jaffe A; Waters SA, 2022, 'Molecular dynamics and functional characterization of I37R-CFTR lasso mutation provide insights into channel gating activity', iScience, 25, pp. 103710, http://dx.doi.org/10.1016/j.isci.2021.103710

Freeman AJ; Ng K; Wang F; Cress GA; Abu-El-Haija M; Ellery K; Fishman DS; Gariepy CE; Goday PS; Gonska T; Lin TK; Liu Q; Maqbool A; Mcferron BA; Morinville VD; Ooi CY; Perito E; Schwarzenberg SJ; Sellers ZM; Shah U; Troendle DM; Wilschanski M; Zheng Y; Yuan Y; Lowe M; Uc A, 2022, '570: PANCREATIC ENZYME SUPPLEMENT USE IN CHILDREN WITH ACUTE RECURRENT PANCREATITIS (PAUSE): AN OBSERVATIONAL STUDY*', Gastroenterology, 162, pp. S - 139, http://dx.doi.org/10.1016/s0016-5085(22)60337-8

Morinville VD; Husain SZ; Wang F; Cress GA; Abu-El-Haija M; Downs E; Ellery K; Fishman DS; Gariepy CE; Goday PS; Gonska T; Liu Q; Maqbool A; Mark J; Mcferron BA; Ooi CY; Perito E; Schwarzenberg SJ; Sellers ZM; Shah U; Troendle DM; Wilschanski M; Zheng Y; Yuan Y; Lowe M; Uc A, 2022, 'Sa1299: DRUG-INDUCED PANCREATITIS IN CHILDREN WITH ACUTE RECURRENT AND CHRONIC PANCREATITIS REVEALS CONCOMITANT RISK FACTORS AND EXPOSES LIMITATIONS TO CURRENT CAUSALITY SCORING', Gastroenterology, 162, pp. S - 365, http://dx.doi.org/10.1016/s0016-5085(22)60876-x

Dike CR; Cress G; Fishman DS; Gonska T; Ooi CY; Perito ER; Troendle D; Tsai CM; Lowe ME; Uc A, 2021, 'Vascular Complications in Pediatric Pancreatitis: A Case Series', Journal of Pediatric Gastroenterology and Nutrition, 73, pp. E94 - E97, http://dx.doi.org/10.1097/MPG.0000000000003218

Coffey MJ; Garg M; Homaira N; Jaffe A; Ooi CY, 2021, 'A systematic cochrane review of probiotics for people with cystic fibrosis', Paediatric Respiratory Reviews, 39, pp. 61 - 64, http://dx.doi.org/10.1016/j.prrv.2020.06.020

Gariepy CE; Ooi CY; Maqbool A; Ellery KM, 2021, 'Demographics and risk factors for pediatric recurrent acute pancreatitis', Current Opinion in Gastroenterology, 37, pp. 491 - 497, http://dx.doi.org/10.1097/MOG.0000000000000764

Barben J; Castellani C; Munck A; Davies JC; de Winter–de Groot KM; Gartner S; Kashirskaya N; Linnane B; Mayell SJ; McColley S; Ooi CY; Proesmans M; Ren CL; Salinas D; Sands D; Sermet-Gaudelus I; Sommerburg O; Southern KW, 2021, 'Updated guidance on the management of children with cystic fibrosis transmembrane conductance regulator-related metabolic syndrome/cystic fibrosis screen positive, inconclusive diagnosis (CRMS/CFSPID)', Journal of Cystic Fibrosis, 20, pp. 810 - 819, http://dx.doi.org/10.1016/j.jcf.2020.11.006

Perron JE; Coffey MJ; Lovell-Simons A; Dominguez L; King ME; Ooi CY, 2021, 'Resuscitating cardiopulmonary resuscitation training in a virtual reality: Prospective interventional study', Journal of Medical Internet Research, 23, http://dx.doi.org/10.2196/22920

K D; J Y; K M; J F; C O, 2021, 'PE-20: Development of a Consensus Parenteral Nutrition Weaning Algorithm for Paediatric Patients with Short-bowel Syndrome Responding to Teduglutide Therapy', Transplantation, 105, pp. S39 - S40, http://dx.doi.org/10.1097/01.tp.0000757752.35682.97

Gunasagaran HL; Varjavandi V; Lemberg DA; Ooi CY; Gupta N; Krishnan U, 2020, 'The utility of multichannel intraluminal impedance-pH testing in tailoring the management of paediatric gastro-oesophageal reflux disease', Acta Paediatrica, International Journal of Paediatrics, 109, pp. 2799 - 2807, http://dx.doi.org/10.1111/apa.15317

Lee ALH; Varjavandi V; Lemberg DA; Ooi CY; Gupta N; Krishnan U, 2020, 'Does Combined Multichannel Intraluminal Impedance and pH (MII-pH) Testing Improve Clinical Outcomes in Children with Gastroesophageal Reflux Disease?', Journal of Pediatric Gastroenterology and Nutrition, 71, pp. 596 - 603, http://dx.doi.org/10.1097/MPG.0000000000002851

Coffey MJ; Ooi CY, 2020, 'Paediatric pancreatic diseases', Journal of Paediatrics and Child Health, 56, pp. 1694 - 1701, http://dx.doi.org/10.1111/jpc.14688

Ledder O; Duvoisin G; Lekar M; Lopez RN; Singh H; Dehlsen K; Lev-Tzion R; Orlanski-Meyer E; Shteyer E; Krishnan U; Gupta N; Lemberg DA; Cohen S; Ooi CY, 2020, 'Early feeding in acute pancreatitis in children: A randomized controlled trial', Pediatrics, 146, http://dx.doi.org/10.1542/PEDS.2020-1149

Prentice BJ; Ooi CY; Verge CF; Hameed S; Widger J, 2020, 'Glucose abnormalities detected by continuous glucose monitoring are common in young children with Cystic Fibrosis', Journal of Cystic Fibrosis, 19, pp. 700 - 703, http://dx.doi.org/10.1016/j.jcf.2020.02.009

Ting A; Katz T; Sutherland R; Liu V; Tong CW; Gao Y; Lemberg DA; Krishnan U; Gupta N; Coffey MJ; Ooi CY, 2020, 'Evaluating the Dietary Intakes of Energy, Macronutrients, Sugar, Fiber, and Micronutrients in Children With Celiac Disease', Journal of Pediatric Gastroenterology and Nutrition, 71, pp. 246 - 251, http://dx.doi.org/10.1097/MPG.0000000000002743

Perron JE; Coffey MJ; Lovell-Simons A; Dominguez L; King ME; Ooi CY, 2020, 'Resuscitating Cardiopulmonary Resuscitation Training in a Virtual Reality: Prospective Interventional Study (Preprint)', , http://dx.doi.org/10.2196/preprints.22920

Dike CR; Zimmerman B; Zheng Y; Wilschanski M; Werlin SL; Troendle D; Shah U; Schwarzenberg SJ; Pohl J; Perito ER; Ooi CY; Nathan JD; Morinville VD; McFerron B; Mascarenhas M; Maqbool A; Liu Q; Lin TK; Husain SZ; Heyman MB; Gonska T; Giefer MJ; Gariepy CE; Fishman DS; Bellin M; Barth B; Abu-El-Haija M; Lowe ME; Uc A, 2020, 'Clinical and Practice Variations in Pediatric Acute Recurrent or Chronic Pancreatitis: Report From the INSPPIRE Study', Journal of Pediatric Gastroenterology and Nutrition, 71, pp. 112 - 118, http://dx.doi.org/10.1097/MPG.0000000000002661

Abu-El-Haija M; Lowe M; Barth B; Bellin MD; Fishman DS; Freedman S; Gariepy C; Giefer MJ; Gonska T; Heyman MB; Himes R; Husain S; Lin TK; Liu Q; Mascarenhas MR; Maqbool A; McFerron B; Morinville V; Nathan J; Ooi CY; Perito E; Pohl JF; Schwarzenberg SJ; Shah U; Troendle D; Werlin S; Wilschanski M; Zimmerman B; Uc A, 2020, 'Pediatric chronic pancreatitis without prior acute or acute recurrent pancreatitis: A report from the INSPPIRE consortium', Pancreatology, 20, pp. 781 - 784, http://dx.doi.org/10.1016/j.pan.2020.04.001

Coffey MJ; Mckay IR; Doumit M; Chuang S; Adams S; Stelzer-Braid S; Waters SA; Kasparian NA; Thomas T; Jaffe A; Katz T; Ooi CY, 2020, 'Evaluating the Alimentary and Respiratory Tracts in Health and disease (EARTH) research programme: a protocol for prospective, longitudinal, controlled, observational studies in children with chronic disease at an Australian tertiary paediatric hospital', BMJ Open, 10, pp. e033916, http://dx.doi.org/10.1136/bmjopen-2019-033916

Prentice BJ; Chelliah A; Ooi CY; Hameed S; Verge CF; Plush L; Widger J, 2020, 'Peak OGTT glucose is associated with lower lung function in young children with cystic fibrosis', Journal of Cystic Fibrosis, 19, pp. 305 - 309, http://dx.doi.org/10.1016/j.jcf.2019.05.005

Coffey MJ; Garg M; Homaira N; Jaffe A; Ooi CY, 2020, 'Probiotics for people with cystic fibrosis', Cochrane Database of Systematic Reviews, 2020, pp. cd012949, http://dx.doi.org/10.1002/14651858.CD012949.pub2

Perito ER; Palermo TM; Pohl JF; Mascarenhas M; Abu-El-Haija M; Barth B; Bellin MD; Fishman DS; Freedman S; Gariepy C; Giefer M; Gonska T; Heyman MB; Himes RW; Husain SZ; Lin T; Liu Q; Maqbool A; McFerron B; Morinville VD; Nathan JD; Ooi CY; Rhee S; Schwarzenberg SJ; Shah U; Troendle DM; Werlin S; Wilschanski M; Zheng Y; Zimmerman MB; Lowe M; Uc A, 2020, 'Factors Associated with Frequent Opioid Use in Children with Acute Recurrent and Chronic Pancreatitis', Journal of Pediatric Gastroenterology and Nutrition, 70, pp. 106 - 114, http://dx.doi.org/10.1097/MPG.0000000000002502

van der Haak N; King SJ; Crowder T; Kench A; Painter C; Saxby N, 2020, 'Highlights from the nutrition guidelines for cystic fibrosis in Australia and New Zealand', Journal of Cystic Fibrosis, 19, pp. 16 - 25, http://dx.doi.org/10.1016/j.jcf.2019.05.007

Tham A; Katz TE; Sutherland RE; Garg M; Liu V; Tong CW; Brunner R; Quintano J; Collins C; Ooi CY, 2020, 'Micronutrient intake in children with cystic fibrosis in Sydney, Australia', Journal of Cystic Fibrosis, 19, pp. 146 - 152, http://dx.doi.org/10.1016/j.jcf.2019.08.028

Palermo TM; Murray C; Aalfs H; Abu-El-Haija M; Barth B; Bellin MD; Ellery K; Fishman DS; Gariepy CE; Giefer MJ; Goday P; Gonska T; Heyman MB; Husain SZ; Lin TK; Liu QY; Mascarenhas MR; Maqbool A; McFerron B; Morinville VD; Nathan JD; Ooi CY; Perito ER; Pohl JF; Schwarzenberg SJ; Sellers ZM; Serrano J; Shah U; Troendle D; Zheng Y; Yuan Y; Lowe M; Uc A, 2020, 'Web-based cognitive-behavioral intervention for pain in pediatric acute recurrent and chronic pancreatitis: Protocol of a multicenter randomized controlled trial from the study of chronic pancreatitis, diabetes and pancreatic cancer (CPDPC)', Contemporary Clinical Trials, 88, http://dx.doi.org/10.1016/j.cct.2019.105898

Traini I; Menzies J; Hughes J; Katz T; Coffey MJ; Ooi CY; Leach ST; Krishnan U; the EARTHRGOBO, 2020, '307 LOOKING BEYOND THE ESOPHAGUS: INVESTIGATING THE INTESTINAL MICROBIOTA AND INFLAMMATION IN CHILDREN WITH REPAIRED ESOPHAGEAL ATRESIA', Gastroenterology, 158, http://dx.doi.org/10.1016/s0016-5085(20)34438-3

Singh H; Coffey MJ; Ooi CY, 2020, 'Cystic Fibrosis-related Liver Disease is Associated With Increased Disease Burden and Endocrine Comorbidities.', J Pediatr Gastroenterol Nutr, 70, pp. 796 - 800, http://dx.doi.org/10.1097/MPG.0000000000002694

Lee ALH; Varjavandi V; Lemberg DA; Ooi CY; Gupta N; Krishnan U, 2020, 'Does Combined Multichannel Intraluminal Impedance and pH (MII-pH) Testing Improve Clinical Outcomes in Children With Gastroesophageal Reflux Disease?', J Pediatr Gastroenterol Nutr, 71, pp. 596 - 603, http://dx.doi.org/10.1097/MPG.0000000000002851

Traini I; Menzies J; Hughes J; Katz T; Coffey MJ; Ooi CY; Leach ST; Krishnan U; Group EARTHR, 2020, 'Mo2000 FOOD FOR THOUGHT: DIET, DYSPHAGIA AND GROWTH IN CHILDREN WITH REPAIRED ESOPHAGEAL ATRESIA', Gastroenterology, 158, pp. S - 1575, http://dx.doi.org/10.1016/s0016-5085(20)34618-7

Paida K; McKay IR; Coffey MJ; Kasparian N; Katz T; Ooi CY, 2020, 'P374 Evaluation of anxiety levels in a paediatric cystic fibrosis population', Journal of Cystic Fibrosis, 19, pp. S160 - S161, http://dx.doi.org/10.1016/s1569-1993(20)30702-5

Coffey MJ; Low I; Stelzer-Braid S; Wemheuer B; Garg M; Thomas T; Jaffe A; Rawlinson WD; Ooi CY, 2020, 'The intestinal virome in children with cystic fibrosis differs from healthy controls.', PLoS One, 15, pp. e0233557, http://dx.doi.org/10.1371/journal.pone.0233557

Colombo C; Alicandro G; Evans H; Oliver M; Ooi CY; Alghisi F; Kashirskaya N; Kondratyeva E; Ramm G; de Monestrol I; Padoan R; Asherova I; Lindblad A, 2020, 'WS03.2 A multicentre cohort study on ursodeoxycholic acid and liver disease associated with cystic fibrosis', Journal of Cystic Fibrosis, 19, pp. S4 - S5, http://dx.doi.org/10.1016/s1569-1993(20)30178-8

Coffey MJ; Nielsen S; Wemheuer B; Kaakoush NO; Garg M; Needham B; Pickford R; Jaffe A; Thomas T; Ooi CY, 2019, 'Gut Microbiota in Children With Cystic Fibrosis: A Taxonomic and Functional Dysbiosis', Scientific Reports, 9, pp. 18593, http://dx.doi.org/10.1038/s41598-019-55028-7

Tan SMJ; Coffey MJ; Ooi CY, 2019, 'Differences in clinical outcomes of paediatric cystic fibrosis patients with and without meconium ileus', Journal of Cystic Fibrosis, 18, pp. 857 - 862, http://dx.doi.org/10.1016/j.jcf.2019.09.008

Prentice BJ; Ooi CY; Strachan RE; Hameed S; Ebrahimkhani S; Waters SA; Verge CF; Widger J, 2019, 'Early glucose abnormalities are associated with pulmonary inflammation in young children with cystic fibrosis', Journal of Cystic Fibrosis, 18, pp. 869 - 873, http://dx.doi.org/10.1016/j.jcf.2019.03.010

Ooi CY; Sutherland R; Castellani C; Keenan K; Boland M; Reisman J; Bjornson C; Chilvers MA; Van Wylick R; Kent S; Price A; Mateos-Corral D; Hughes D; Solomon M; Zuberbuhler P; Brusky J; Durie PR; Ratjen F; Gonska T, 2019, 'Immunoreactive trypsinogen levels in newborn screened infants with an inconclusive diagnosis of cystic fibrosis', BMC Pediatrics, 19, http://dx.doi.org/10.1186/s12887-019-1756-4

Lin TK; Abu-El-Haija M; Nathan JD; Palermo JP; Barth B; Bellin M; Fishman DS; Freedman SD; Gariepy CE; Giefer MJ; Gonska T; Heyman MB; Himes R; Husain SZ; Liu Q; Maqbool A; Mascarenhas M; McFerron B; Morinville VD; Ooi CY; Perito E; Pohl JF; Rhee S; Schwarzenberg SJ; Shah U; Troendle D; Werlin SL; Wilschanski M; Zimmerman MB; Lowe ME; Uc A, 2019, 'Pancreas Divisum in Pediatric Acute Recurrent and Chronic Pancreatitis: Report from INSPPIRE', Journal of Clinical Gastroenterology, 53, pp. E232 - E238, http://dx.doi.org/10.1097/MCG.0000000000001063

Schwarzenberg SJ; Uc A; Zimmerman B; Wilschanski M; Wilcox CM; Whitcomb DC; Werlin SL; Troendle D; Tang G; Slivka A; Singh VK; Sherman S; Shah U; Sandhu BS; Romagnuolo J; Rhee S; Pohl JF; Perito ER; Ooi CY; Nathan JD; Muniraj T; Morinville VD; McFerron B; Mascarenhas M; Maqbool A; Liu Q; Lin TK; Lewis M; Husain SZ; Himes R; Heyman MB; Guda N; Gonska T; Giefer MJ; Gelrud A; Gariepy CE; Gardner TB; Freedman SD; Forsmark CE; Fishman DS; Cote GA; Conwell D; Brand RE; Bellin M; Barth B; Banks PA; Anderson MA; Amann ST; Alkaade S; Abu-El-Haija M; Abberbock JN; Lowe ME; Yadav D, 2019, 'Chronic Pancreatitis: Pediatric and Adult Cohorts Show Similarities in Disease Progress Despite Different Risk Factors', Journal of pediatric gastroenterology and nutrition, 68, pp. 566 - 573, http://dx.doi.org/10.1097/MPG.0000000000002279

Lopez RN; Al Rawahi Y; Stormon M; Chennapragada M; Ooi CY, 2019, 'Hepatobiliary and Pancreatic: Hepatic arterioportal fistula: A novel and treatable feature of Alagille syndrome', Journal of Gastroenterology and Hepatology (Australia), 34, pp. 633, http://dx.doi.org/10.1111/jgh.14506

Fawcett LK; Widger J; Henry GM; Ooi CY, 2019, 'Case report: Cholecystoduodenostomy for cholestatic liver disease in a premature infant with cystic fibrosis and short gut syndrome', BMC Pediatrics, 19, pp. 78, http://dx.doi.org/10.1186/s12887-019-1443-5

Bellin MD; Lowe M; Zimmerman MB; Wilschanski M; Werlin S; Troendle DM; Shah U; Schwarzenberg SJ; Pohl JF; Perito E; Ooi CY; Nathan JD; Morinville VD; McFerron BA; Mascarenhas MR; Maqbool A; Liu Q; Lin TK; Husain SZ; Himes R; Heyman MB; Gonska T; Giefer MJ; Gariepy CE; Freedman SD; Fishman DS; Barth B; Abu-El-Haija M; Uc A, 2019, 'Diabetes Mellitus in Children with Acute Recurrent and Chronic Pancreatitis: Data from the INSPPIRE Cohort', Journal of Pediatric Gastroenterology and Nutrition, http://dx.doi.org/10.1097/MPG.0000000000002482

Liu QY; Abu-El-Haija M; Husain SZ; Barth B; Bellin M; Fishman DS; Freedman SD; Gariepy CE; Giefer MJ; Gonska T; Heyman MB; Himes R; Lin TK; Maqbool A; Mascarenhas M; McFerron BA; Morinville VD; Nathan JD; Ooi CY; Perito ER; Pohl JF; Rhee S; Schwarzenberg SJ; Shah U; Troendle D; Werlin SL; Wilschanski M; Zimmerman MB; Lowe ME; Uc A, 2019, 'Risk Factors for Rapid Progression from Acute Recurrent to Chronic Pancreatitis in Children: Report from INSPPIRE', Journal of Pediatric Gastroenterology and Nutrition, 69, pp. 206 - 211, http://dx.doi.org/10.1097/MPG.0000000000002405

Kan JM; Cowan CSM; Ooi CY; Kasparian NA, 2019, 'What can the gut microbiome teach us about the connections between child physical and mental health? A systematic review', Developmental Psychobiology, 61, pp. 700 - 713, http://dx.doi.org/10.1002/dev.21819

Coffey MJ; Low I; Stelzer-Braid S; Rawlinson W; Thomas T; Jaffe A; Ooi CY, 2019, '1139 – The Intestinal Virome in Children with Cystic Fibrosis: A Pilot Study', Gastroenterology, 156, pp. S - 241, http://dx.doi.org/10.1016/s0016-5085(19)37406-2

Uc A; Perito E; Pohl J; Shah U; Abu-El-Haija M; Appana S; Barth B; Bellin M; Ellery K; Fishman DS; Gariepy CE; Giefer MJ; Gonska T; Heyman M; Himes R; Husain SZ; Maqbool A; Mascarenhas MR; McFerron BA; Morinville VD; Lin TK; Nathan JD; Ooi CY; Schwarzenberg SJ; Sellers ZM; Serrano J; Troendle DM; Werlin S; Wilschanski M; Zheng Y; Yuan Y; Lowe M, 2019, '651 – International Study Group of Pediatric Pancreatitis: in Search for a Cure(INSPPIRE 2) Cohort Study: Design and Rationale from the Consortium for the Study of Chronic Pancreatitis, Diabetes, and Pancreatic Cancer (CPDPC)', Gastroenterology, 156, pp. S - 136, http://dx.doi.org/10.1016/s0016-5085(19)37131-8

Singh H; Coffey MJ; Ooi CY, 2019, '652 – Clinical Outcomes in Australian Children with Cystic Fibrosis Liver Disease: A Nationwide Retrospective Review with Matched Controls', Gastroenterology, 156, http://dx.doi.org/10.1016/s0016-5085(19)37132-x

Bellin MD; Lowe M; Zimmerman MB; Wilschanski M; Werlin S; Troendle DM; Shah U; Schwarzenberg SJ; Pohl JF; Perito E; Ooi CY; Nathan JD; Morinville VD; McFerron BA; Mascarenhas MR; Maqbool A; Liu Q; Lin TK; Husain SZ; Himes R; Heyman MB; Gonska T; Giefer MJ; Gariepy CE; Freedman SD; Fishman DS; Barth B; Abu-El-Haija M; Uc A, 2019, 'Diabetes Mellitus in Children with Acute Recurrent and Chronic Pancreatitis: Data From the INternational Study Group of Pediatric Pancreatitis: In Search for a CuRE Cohort.', J Pediatr Gastroenterol Nutr, 69, pp. 599 - 606, http://dx.doi.org/10.1097/MPG.0000000000002482

Coffey MJ; Nielsen S; Wemheuer B; Garg M; Needham B; Jaffe A; Thomas T; Ooi CY, 2019, 'Mo1947 – Taxonomic and Functional Intestinal Dysbiosis in Children with Cystic Fibrosis', Gastroenterology, 156, pp. S - 895, http://dx.doi.org/10.1016/s0016-5085(19)39210-8


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